RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 ZFYVE16Q7Z3T8 1539 aa19.25■□□□□ 0.67
LINC00940-201ENST00000418006 EIF4G2P78344 907 aaKnown RBP eCLIP19.24■□□□□ 0.67
LINC00940-201ENST00000418006 RIMBP3CA6NJZ7 1639 aa19.23■□□□□ 0.67
LINC00940-201ENST00000418006 RIMBP3BA6NNM3 1639 aa19.23■□□□□ 0.67
LINC00940-201ENST00000418006 RIMBP3Q9UFD9 1639 aa19.23■□□□□ 0.67
LINC00940-201ENST00000418006 RGL3Q3MIN7 710 aa19.23■□□□□ 0.67
LINC00940-201ENST00000418006 RTEL1-TNFRSF6BF6WH68 1400 aa19.22■□□□□ 0.67
LINC00940-201ENST00000418006 KIF3BO15066 747 aa19.22■□□□□ 0.67
LINC00940-201ENST00000418006 UNC13BO14795 1591 aa19.22■□□□□ 0.67
LINC00940-201ENST00000418006 ATP7AQ04656 1500 aa19.21■□□□□ 0.67
LINC00940-201ENST00000418006 DCAF11Q8TEB1 546 aa19.21■□□□□ 0.67
LINC00940-201ENST00000418006 NEFLP07196 543 aa19.21■□□□□ 0.67
LINC00940-201ENST00000418006 CCDC144AA2RUR9 1427 aa19.19■□□□□ 0.66
LINC00940-201ENST00000418006 RAPGEF3O95398 923 aa19.19■□□□□ 0.66
LINC00940-201ENST00000418006 IQGAP3Q86VI3 1631 aa19.16■□□□□ 0.66
LINC00940-201ENST00000418006 INO80Q9ULG1 1556 aaPredicted RBP19.16■□□□□ 0.66
LINC00940-201ENST00000418006 ZNF518AQ6AHZ1 1483 aa19.15■□□□□ 0.66
LINC00940-201ENST00000418006 MSH5O43196 834 aa19.14■□□□□ 0.66
LINC00940-201ENST00000418006 FAM69CQ0P6D2 419 aa19.14■□□□□ 0.66
LINC00940-201ENST00000418006 PLA2R1Q13018 1463 aa19.14■□□□□ 0.65
LINC00940-201ENST00000418006 WASHC2AQ641Q2 1341 aa19.13■□□□□ 0.65
LINC00940-201ENST00000418006 DHX29Q7Z478 1369 aaKnown RBP19.13■□□□□ 0.65
LINC00940-201ENST00000418006 MAGI2Q86UL8 1455 aa19.12■□□□□ 0.65
LINC00940-201ENST00000418006 C11orf95C9JLR9 678 aaPredicted RBP19.11■□□□□ 0.65
LINC00940-201ENST00000418006 KIDINS220Q9ULH0 1771 aa19.1■□□□□ 0.65
LINC00940-201ENST00000418006 POGZQ7Z3K3 1410 aa19.1■□□□□ 0.65
LINC00940-201ENST00000418006 KANK1Q14678 1352 aa19.1■□□□□ 0.65
LINC00940-201ENST00000418006 CFAP74Q9C0B2 1584 aa19.09■□□□□ 0.65
LINC00940-201ENST00000418006 GGT6Q6P531 493 aa19.09■□□□□ 0.65
LINC00940-201ENST00000418006 POLR3GLQ9BT43 218 aa19.08■□□□□ 0.65
LINC00940-201ENST00000418006 CARD11Q9BXL7 1154 aa19.08■□□□□ 0.65
LINC00940-201ENST00000418006 ANP32CO43423 234 aa19.07■□□□□ 0.64
LINC00940-201ENST00000418006 CCER2I3L3R5 266 aa19.06■□□□□ 0.64
LINC00940-201ENST00000418006 USP47Q96K76 1375 aa19.06■□□□□ 0.64
LINC00940-201ENST00000418006 A2MP01023 1474 aa19.05■□□□□ 0.64
LINC00940-201ENST00000418006 NEO1Q92859 1461 aa19.04■□□□□ 0.64
LINC00940-201ENST00000418006 E9PCH4 1651 aa19.04■□□□□ 0.64
LINC00940-201ENST00000418006 UHRF1BP1Q6BDS2 1440 aa19.03■□□□□ 0.64
LINC00940-201ENST00000418006 SPATA31E1Q6ZUB1 1445 aa19.03■□□□□ 0.64
LINC00940-201ENST00000418006 FANCIQ9NVI1 1328 aa19.02■□□□□ 0.64
LINC00940-201ENST00000418006 DEPDC5O75140 1603 aa19.02■□□□□ 0.63
LINC00940-201ENST00000418006 KDM5CP41229 1560 aa19.02■□□□□ 0.63
LINC00940-201ENST00000418006 ROCK2O75116 1388 aaKnown RBP19.02■□□□□ 0.63
LINC00940-201ENST00000418006 MAP3K4Q9Y6R4 1608 aa19.01■□□□□ 0.63
LINC00940-201ENST00000418006 HECW2Q9P2P5 1572 aa19.01■□□□□ 0.63
LINC00940-201ENST00000418006 TSPOAP1O95153 1857 aa19.01■□□□□ 0.63
LINC00940-201ENST00000418006 MLH3Q9UHC1 1453 aa19.01■□□□□ 0.63
LINC00940-201ENST00000418006 CCDC7Q96M83 1385 aa19.01■□□□□ 0.63
LINC00940-201ENST00000418006 ATP10AO60312 1499 aa19■□□□□ 0.63
LINC00940-201ENST00000418006 NBPF1Q3BBV0 1214 aa19■□□□□ 0.63
LINC00940-201ENST00000418006 KIF7Q2M1P5 1343 aa18.99■□□□□ 0.63
LINC00940-201ENST00000418006 RALGAPBQ86X10 1494 aa18.99■□□□□ 0.63
LINC00940-201ENST00000418006 EIF2AK4Q9P2K8 1649 aaKnown RBP18.98■□□□□ 0.63
LINC00940-201ENST00000418006 CNGB1Q14028 1251 aaPredicted RBP18.98■□□□□ 0.63
LINC00940-201ENST00000418006 MROH1Q8NDA8 1641 aa18.98■□□□□ 0.63
LINC00940-201ENST00000418006 ST20-MTHFSA0A0A6YYL1 179 aa18.97■□□□□ 0.63
LINC00940-201ENST00000418006 ABCA6Q8N139 1617 aa18.97■□□□□ 0.63
LINC00940-201ENST00000418006 PRAG1Q86YV5 1406 aa18.97■□□□□ 0.63
LINC00940-201ENST00000418006 PRDM15P57071 1507 aaPredicted RBP18.97■□□□□ 0.63
LINC00940-201ENST00000418006 TET3O43151 1660 aa18.97■□□□□ 0.63
LINC00940-201ENST00000418006 WASHC2CQ9Y4E1 1318 aa18.96■□□□□ 0.63
LINC00940-201ENST00000418006 DIP2BQ9P265 1576 aa18.96■□□□□ 0.63
LINC00940-201ENST00000418006 FRMPD1Q5SYB0 1578 aa18.96■□□□□ 0.63
LINC00940-201ENST00000418006 YEATS2Q9ULM3 1422 aa18.95■□□□□ 0.62
LINC00940-201ENST00000418006 VWDEQ8N2E2 1590 aa18.95■□□□□ 0.62
LINC00940-201ENST00000418006 GLI2P10070 1586 aa18.94■□□□□ 0.62
LINC00940-201ENST00000418006 SPHKAPQ2M3C7 1700 aa18.94■□□□□ 0.62
LINC00940-201ENST00000418006 CHGAP10645 457 aaKnown RBP18.94■□□□□ 0.62
LINC00940-201ENST00000418006 ERICH6Q7L0X2 663 aa18.94■□□□□ 0.62
LINC00940-201ENST00000418006 TRPM2O94759 1503 aa18.93■□□□□ 0.62
LINC00940-201ENST00000418006 UGGT1Q9NYU2 1555 aa18.93■□□□□ 0.62
LINC00940-201ENST00000418006 PTPRTO14522 1441 aa18.93■□□□□ 0.62
LINC00940-201ENST00000418006 CFAP65Q6ZU64 1925 aaKnown RBP18.92■□□□□ 0.62
LINC00940-201ENST00000418006 CEP152O94986 1710 aa18.92■□□□□ 0.62
LINC00940-201ENST00000418006 CLTCL1P53675 1640 aa18.92■□□□□ 0.62
LINC00940-201ENST00000418006 RICTORQ6R327 1708 aa18.91■□□□□ 0.62
LINC00940-201ENST00000418006 CNTLNQ9NXG0 1405 aa18.91■□□□□ 0.62
LINC00940-201ENST00000418006 BCORL1Q5H9F3 1711 aa18.91■□□□□ 0.62
LINC00940-201ENST00000418006 PPRC1Q5VV67 1664 aaKnown RBP18.9■□□□□ 0.62
LINC00940-201ENST00000418006 DIP2CQ9Y2E4 1556 aa18.89■□□□□ 0.61
LINC00940-201ENST00000418006 EFCAB6Q5THR3 1501 aa18.89■□□□□ 0.61
LINC00940-201ENST00000418006 TRPM1Q7Z4N2 1603 aa18.88■□□□□ 0.61
LINC00940-201ENST00000418006 RNF17Q9BXT8 1623 aaKnown RBP18.87■□□□□ 0.61
LINC00940-201ENST00000418006 NPATQ14207 1427 aa18.85■□□□□ 0.61
LINC00940-201ENST00000418006 IRX6P78412 446 aaPredicted RBP18.84■□□□□ 0.61
LINC00940-201ENST00000418006 LMTK2Q8IWU2 1503 aa18.82■□□□□ 0.6
LINC00940-201ENST00000418006 MLECQ14165 292 aa18.82■□□□□ 0.6
LINC00940-201ENST00000418006 ABCC3O15438 1527 aa18.82■□□□□ 0.6
LINC00940-201ENST00000418006 POLR1AO95602 1720 aaPredicted RBP18.81■□□□□ 0.6
LINC00940-201ENST00000418006 SENP3Q9H4L4 574 aaPredicted RBP18.8■□□□□ 0.6
LINC00940-201ENST00000418006 PRKRIP1Q9H875 184 aaPredicted RBP18.8■□□□□ 0.6
LINC00940-201ENST00000418006 HNRNPUQ00839 825 aaKnown RBP eCLIP18.79■□□□□ 0.6
LINC00940-201ENST00000418006 ADGRF5Q8IZF2 1346 aa18.79■□□□□ 0.6
LINC00940-201ENST00000418006 GPRASP1Q5JY77 1395 aa18.79■□□□□ 0.6
LINC00940-201ENST00000418006 NUTM2DQ5VT03 806 aaPredicted RBP18.79■□□□□ 0.6
LINC00940-201ENST00000418006 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
LINC00940-201ENST00000418006 CFAP70Q5T0N1 1121 aa18.78■□□□□ 0.6
LINC00940-201ENST00000418006 MADDQ8WXG6 1647 aa18.77■□□□□ 0.6
LINC00940-201ENST00000418006 KIF1BO60333 1816 aa18.77■□□□□ 0.6
LINC00940-201ENST00000418006 KIF13AQ9H1H9 1805 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms