RNA–Protein interactions for RNA: ENST00000417942.5

XIST-202, X inactive specific transcript, humanhuman

TSL 3

Gene XIST, Length 724 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-202ENST00000417942 PTPREP23469 700 aa11.14□□□□□ -0.63
XIST-202ENST00000417942 FBXW7Q969H0 707 aa11.13□□□□□ -0.63
XIST-202ENST00000417942 EPAS1Q99814 870 aa11.13□□□□□ -0.63
XIST-202ENST00000417942 MYT1LQ9UL68 1186 aa11.13□□□□□ -0.63
XIST-202ENST00000417942 PRIM1P49642 420 aaKnown RBP11.12□□□□□ -0.63
XIST-202ENST00000417942 HAP1P54257 671 aaPredicted RBP11.12□□□□□ -0.63
XIST-202ENST00000417942 ZBED2Q9BTP6 218 aa11.12□□□□□ -0.63
XIST-202ENST00000417942 COL9A1P20849 921 aa11.11□□□□□ -0.63
XIST-202ENST00000417942 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
XIST-202ENST00000417942 SLC4A5Q9BY07 1137 aa11.11□□□□□ -0.63
XIST-202ENST00000417942 VPS9D1Q9Y2B5 631 aa11.11□□□□□ -0.63
XIST-202ENST00000417942 ARHGEF1Q92888 912 aaKnown RBP11.1□□□□□ -0.63
XIST-202ENST00000417942 KDM2AQ9Y2K7 1162 aa11.1□□□□□ -0.63
XIST-202ENST00000417942 NBR1Q14596 966 aa11.09□□□□□ -0.63
XIST-202ENST00000417942 KCNH8Q96L42 1107 aa11.09□□□□□ -0.63
XIST-202ENST00000417942 EN1Q05925 392 aaPredicted RBP11.08□□□□□ -0.64
XIST-202ENST00000417942 C6orf132Q5T0Z8 1188 aa11.08□□□□□ -0.64
XIST-202ENST00000417942 RBM33Q96EV2 1170 aaKnown RBP11.08□□□□□ -0.64
XIST-202ENST00000417942 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
XIST-202ENST00000417942 GRXCR2A6NFK2 248 aa11.06□□□□□ -0.64
XIST-202ENST00000417942 BHMG1C9JSJ3 638 aaPredicted RBP11.05□□□□□ -0.64
XIST-202ENST00000417942 OSBPP22059 807 aa11.05□□□□□ -0.64
XIST-202ENST00000417942 TSR1Q2NL82 804 aaKnown RBP11.05□□□□□ -0.64
XIST-202ENST00000417942 PROX2Q3B8N5 592 aa11.04□□□□□ -0.64
XIST-202ENST00000417942 MLLT3P42568 568 aaPredicted RBP11.03□□□□□ -0.64
XIST-202ENST00000417942 P3H3Q8IVL6 736 aa11.02□□□□□ -0.65
XIST-202ENST00000417942 MAP3K7O43318 606 aa11.01□□□□□ -0.65
XIST-202ENST00000417942 CDHR5Q9HBB8 845 aa10.99□□□□□ -0.65
XIST-202ENST00000417942 SEMA3EO15041 775 aa10.96□□□□□ -0.65
XIST-202ENST00000417942 RABGEF1Q9UJ41 708 aa10.96□□□□□ -0.65
XIST-202ENST00000417942 TRIM6-TRIM34B2RNG4 842 aa10.94□□□□□ -0.66
XIST-202ENST00000417942 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
XIST-202ENST00000417942 VSIG10Q8N0Z9 540 aa10.94□□□□□ -0.66
XIST-202ENST00000417942 KCTD12Q96CX2 325 aaKnown RBP10.93□□□□□ -0.66
XIST-202ENST00000417942 NPDC1Q9NQX5 325 aaPredicted RBP10.93□□□□□ -0.66
XIST-202ENST00000417942 KIAA1468Q9P260 1216 aa10.93□□□□□ -0.66
XIST-202ENST00000417942 FAM198AQ9UFP1 575 aa10.93□□□□□ -0.66
XIST-202ENST00000417942 TSKSQ9UJT2 592 aa10.93□□□□□ -0.66
XIST-202ENST00000417942 MRPL50Q8N5N7 158 aaKnown RBP10.91□□□□□ -0.66
XIST-202ENST00000417942 NBPF3Q9H094 633 aa10.91□□□□□ -0.66
XIST-202ENST00000417942 STAC3Q96MF2 364 aa10.9□□□□□ -0.66
XIST-202ENST00000417942 TESPA1A2RU30 521 aaPredicted RBP10.89□□□□□ -0.67
XIST-202ENST00000417942 C3orf80F5H4A9 247 aa10.89□□□□□ -0.67
XIST-202ENST00000417942 PRSS12P56730 875 aa10.89□□□□□ -0.67
XIST-202ENST00000417942 CDCA7LQ96GN5 454 aa10.89□□□□□ -0.67
XIST-202ENST00000417942 CERKQ8TCT0 537 aa10.88□□□□□ -0.67
XIST-202ENST00000417942 SEPT9Q9UHD8 586 aaPredicted RBP10.88□□□□□ -0.67
XIST-202ENST00000417942 THSD4Q6ZMP0 1018 aa10.86□□□□□ -0.67
XIST-202ENST00000417942 LAPTM4BQ86VI4 370 aa10.85□□□□□ -0.67
XIST-202ENST00000417942 TTC13Q8NBP0 860 aa10.85□□□□□ -0.67
XIST-202ENST00000417942 HCSTQ9UBK5 93 aa10.85□□□□□ -0.67
XIST-202ENST00000417942 WNT2BQ93097 391 aa10.84□□□□□ -0.67
XIST-202ENST00000417942 RBM27Q9P2N5 1060 aaKnown RBP10.84□□□□□ -0.67
XIST-202ENST00000417942 GOLGA8CPA6NN73 597 aa10.82□□□□□ -0.68
XIST-202ENST00000417942 SMAPO00193 183 aa10.82□□□□□ -0.68
XIST-202ENST00000417942 PTGDRQ13258 359 aa10.82□□□□□ -0.68
XIST-202ENST00000417942 PADI6Q6TGC4 694 aa10.82□□□□□ -0.68
XIST-202ENST00000417942 PACS2Q86VP3 889 aa10.82□□□□□ -0.68
XIST-202ENST00000417942 ZFRQ96KR1 1074 aaKnown RBP10.82□□□□□ -0.68
XIST-202ENST00000417942 FAM98CQ17RN3 349 aaKnown RBP10.81□□□□□ -0.68
XIST-202ENST00000417942 PTPN5P54829 565 aa10.8□□□□□ -0.68
XIST-202ENST00000417942 ARXQ96QS3 562 aa10.8□□□□□ -0.68
XIST-202ENST00000417942 TATDN2Q93075 761 aa10.79□□□□□ -0.68
XIST-202ENST00000417942 BCAMP50895 628 aa10.78□□□□□ -0.68
XIST-202ENST00000417942 RBM26Q5T8P6 1007 aaKnown RBP10.78□□□□□ -0.68
XIST-202ENST00000417942 ANKK1Q8NFD2 765 aa10.78□□□□□ -0.68
XIST-202ENST00000417942 PNMA3Q9UL41 463 aa10.78□□□□□ -0.68
XIST-202ENST00000417942 NUTM2FA1L443 756 aa10.77□□□□□ -0.69
XIST-202ENST00000417942 SOWAHBA6NEL2 793 aa10.77□□□□□ -0.69
XIST-202ENST00000417942 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
XIST-202ENST00000417942 NUDT18Q6ZVK8 323 aa10.76□□□□□ -0.69
XIST-202ENST00000417942 GPR37O15354 613 aa10.75□□□□□ -0.69
XIST-202ENST00000417942 SMYD5Q6GMV2 418 aa10.72□□□□□ -0.69
XIST-202ENST00000417942 EYA1Q99502 592 aa10.72□□□□□ -0.69
XIST-202ENST00000417942 FCHSD2O94868 740 aa10.71□□□□□ -0.69
XIST-202ENST00000417942 SAMD7Q7Z3H4 446 aa10.71□□□□□ -0.69
XIST-202ENST00000417942 LRCH3Q96II8 777 aa10.7□□□□□ -0.7
XIST-202ENST00000417942 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
XIST-202ENST00000417942 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.7□□□□□ -0.7
XIST-202ENST00000417942 FAM161AQ3B820 660 aa10.69□□□□□ -0.7
XIST-202ENST00000417942 PLA2G2EQ9NZK7 142 aa10.69□□□□□ -0.7
XIST-202ENST00000417942 ADGRG1Q9Y653 693 aa10.69□□□□□ -0.7
XIST-202ENST00000417942 FECHP22830 423 aa10.67□□□□□ -0.7
XIST-202ENST00000417942 HIC1Q14526 733 aa10.67□□□□□ -0.7
XIST-202ENST00000417942 TSR3Q9UJK0 312 aaKnown RBP10.67□□□□□ -0.7
XIST-202ENST00000417942 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
XIST-202ENST00000417942 EIF5BO60841 1220 aaKnown RBP10.66□□□□□ -0.7
XIST-202ENST00000417942 GNPATO15228 680 aa10.64□□□□□ -0.71
XIST-202ENST00000417942 SWT1Q5T5J6 900 aaKnown RBP10.64□□□□□ -0.71
XIST-202ENST00000417942 GPIHBP1Q8IV16 184 aa10.62□□□□□ -0.71
XIST-202ENST00000417942 NYAP1Q6ZVC0 841 aa10.61□□□□□ -0.71
XIST-202ENST00000417942 RCCD1A6NED2 376 aa10.6□□□□□ -0.71
XIST-202ENST00000417942 RBM46Q8TBY0 533 aaKnown RBP10.6□□□□□ -0.71
XIST-202ENST00000417942 PXYLP1Q8TE99 480 aa10.6□□□□□ -0.71
XIST-202ENST00000417942 ITGBL1O95965 494 aaPredicted RBP10.59□□□□□ -0.71
XIST-202ENST00000417942 DNAJB2P25686 324 aa10.59□□□□□ -0.71
XIST-202ENST00000417942 PPP4CP60510 307 aa10.59□□□□□ -0.71
XIST-202ENST00000417942 TMEM134Q9H6X4 195 aa10.59□□□□□ -0.71
XIST-202ENST00000417942 IFFO2Q5TF58 517 aa10.58□□□□□ -0.72
XIST-202ENST00000417942 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms