RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 PPM1GO15355 546 aaPredicted RBP17.24■□□□□ 0.35
TNFRSF8-203ENST00000417814 COG6Q9Y2V7 657 aa17.24■□□□□ 0.35
TNFRSF8-203ENST00000417814 TCERG1O14776 1098 aaKnown RBP17.23■□□□□ 0.35
TNFRSF8-203ENST00000417814 KIAA1107Q9UPP5 1409 aa17.23■□□□□ 0.35
TNFRSF8-203ENST00000417814 PANK1Q8TE04 598 aa17.22■□□□□ 0.35
TNFRSF8-203ENST00000417814 TRAK1Q9UPV9 953 aa17.21■□□□□ 0.35
TNFRSF8-203ENST00000417814 BACH2Q9BYV9 841 aa17.2■□□□□ 0.34
TNFRSF8-203ENST00000417814 KDM5BQ9UGL1 1544 aa17.2■□□□□ 0.34
TNFRSF8-203ENST00000417814 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
TNFRSF8-203ENST00000417814 CCDC144AA2RUR9 1427 aa17.2■□□□□ 0.34
TNFRSF8-203ENST00000417814 ARHGEF11O15085 1522 aa17.2■□□□□ 0.34
TNFRSF8-203ENST00000417814 GZF1Q9H116 711 aaPredicted RBP17.19■□□□□ 0.34
TNFRSF8-203ENST00000417814 STK26Q9P289 416 aa17.19■□□□□ 0.34
TNFRSF8-203ENST00000417814 KIF3BO15066 747 aa17.18■□□□□ 0.34
TNFRSF8-203ENST00000417814 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
TNFRSF8-203ENST00000417814 GGT6Q6P531 493 aa17.18■□□□□ 0.34
TNFRSF8-203ENST00000417814 MIA2Q96PC5 1412 aa17.17■□□□□ 0.34
TNFRSF8-203ENST00000417814 DISP3Q9P2K9 1392 aa17.17■□□□□ 0.34
TNFRSF8-203ENST00000417814 TMEM132EQ6IEE7 984 aa17.17■□□□□ 0.34
TNFRSF8-203ENST00000417814 CFAP70Q5T0N1 1121 aa17.17■□□□□ 0.34
TNFRSF8-203ENST00000417814 SPINK5Q9NQ38 1064 aaPredicted RBP17.16■□□□□ 0.34
TNFRSF8-203ENST00000417814 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
TNFRSF8-203ENST00000417814 FRAT2O75474 233 aaPredicted RBP17.15■□□□□ 0.34
TNFRSF8-203ENST00000417814 CAMSAP2Q08AD1 1489 aa17.15■□□□□ 0.34
TNFRSF8-203ENST00000417814 PPP2R1AP30153 589 aa17.14■□□□□ 0.33
TNFRSF8-203ENST00000417814 C9orf84Q5VXU9 1444 aa17.14■□□□□ 0.33
TNFRSF8-203ENST00000417814 NUP153P49790 1475 aaKnown RBP17.13■□□□□ 0.33
TNFRSF8-203ENST00000417814 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
TNFRSF8-203ENST00000417814 IQGAP2Q13576 1575 aa17.13■□□□□ 0.33
TNFRSF8-203ENST00000417814 NFKBIBQ15653 356 aa17.13■□□□□ 0.33
TNFRSF8-203ENST00000417814 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF8-203ENST00000417814 TNNQ9UQP3 1299 aa17.13■□□□□ 0.33
TNFRSF8-203ENST00000417814 TEX14Q8IWB6 1497 aa17.13■□□□□ 0.33
TNFRSF8-203ENST00000417814 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
TNFRSF8-203ENST00000417814 TROQ12816 1431 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF8-203ENST00000417814 PZPP20742 1482 aa17.12■□□□□ 0.33
TNFRSF8-203ENST00000417814 LAMC3Q9Y6N6 1575 aa17.11■□□□□ 0.33
TNFRSF8-203ENST00000417814 BRD4O60885 1362 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF8-203ENST00000417814 PLEKHG5O94827 1062 aa17.1■□□□□ 0.33
TNFRSF8-203ENST00000417814 CARMIL2Q6F5E8 1435 aa17.1■□□□□ 0.33
TNFRSF8-203ENST00000417814 CTTNBP2Q8WZ74 1663 aa17.09■□□□□ 0.33
TNFRSF8-203ENST00000417814 HECW1Q76N89 1606 aa17.09■□□□□ 0.33
TNFRSF8-203ENST00000417814 CUL7Q14999 1698 aa17.09■□□□□ 0.33
TNFRSF8-203ENST00000417814 GPATCH8Q9UKJ3 1502 aaKnown RBP17.09■□□□□ 0.33
TNFRSF8-203ENST00000417814 MORC1Q86VD1 984 aa17.09■□□□□ 0.33
TNFRSF8-203ENST00000417814 PTPRGP23470 1445 aa17.09■□□□□ 0.33
TNFRSF8-203ENST00000417814 PER1O15534 1290 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF8-203ENST00000417814 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.33
TNFRSF8-203ENST00000417814 ARID4BQ4LE39 1312 aaPredicted RBP17.08■□□□□ 0.32
TNFRSF8-203ENST00000417814 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
TNFRSF8-203ENST00000417814 ELL2O00472 640 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF8-203ENST00000417814 U2AF1L5P0DN76 240 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF8-203ENST00000417814 U2AF1Q01081 240 aaKnown RBP eCLIP17.07■□□□□ 0.32
TNFRSF8-203ENST00000417814 LRRIQ1Q96JM4 1722 aa17.06■□□□□ 0.32
TNFRSF8-203ENST00000417814 ROCK1Q13464 1354 aa17.06■□□□□ 0.32
TNFRSF8-203ENST00000417814 DDRGK1Q96HY6 314 aa17.05■□□□□ 0.32
TNFRSF8-203ENST00000417814 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
TNFRSF8-203ENST00000417814 TESK2Q96S53 571 aa17.05■□□□□ 0.32
TNFRSF8-203ENST00000417814 SLC24A1O60721 1099 aa17.04■□□□□ 0.32
TNFRSF8-203ENST00000417814 TPRNQ4KMQ1 711 aa17.04■□□□□ 0.32
TNFRSF8-203ENST00000417814 IGHDP01880 384 aa17.04■□□□□ 0.32
TNFRSF8-203ENST00000417814 SOX12O15370 315 aa17.03■□□□□ 0.32
TNFRSF8-203ENST00000417814 SEC24BO95487 1268 aa17.03■□□□□ 0.32
TNFRSF8-203ENST00000417814 FBLN1P23142 703 aa17.02■□□□□ 0.32
TNFRSF8-203ENST00000417814 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
TNFRSF8-203ENST00000417814 DUSP27Q5VZP5 1158 aa17.02■□□□□ 0.32
TNFRSF8-203ENST00000417814 PLEKHH1Q9ULM0 1364 aa17.01■□□□□ 0.31
TNFRSF8-203ENST00000417814 TCOF1Q13428 1488 aaKnown RBP17.01■□□□□ 0.31
TNFRSF8-203ENST00000417814 MFAP1P55081 439 aaKnown RBP17.01■□□□□ 0.31
TNFRSF8-203ENST00000417814 SPAG9O60271 1321 aaKnown RBP17.01■□□□□ 0.31
TNFRSF8-203ENST00000417814 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
TNFRSF8-203ENST00000417814 TSR2Q969E8 191 aaKnown RBP17.01■□□□□ 0.31
TNFRSF8-203ENST00000417814 APBB1O00213 710 aa17■□□□□ 0.31
TNFRSF8-203ENST00000417814 GSE1Q14687 1217 aa17■□□□□ 0.31
TNFRSF8-203ENST00000417814 BCORL1Q5H9F3 1711 aa16.99■□□□□ 0.31
TNFRSF8-203ENST00000417814 EFCAB2Q5VUJ9 269 aa16.99■□□□□ 0.31
TNFRSF8-203ENST00000417814 KIAA0586Q9BVV6 1533 aa16.99■□□□□ 0.31
TNFRSF8-203ENST00000417814 CENPJQ9HC77 1338 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF8-203ENST00000417814 PLEKHH2Q8IVE3 1493 aa16.98■□□□□ 0.31
TNFRSF8-203ENST00000417814 CENPQQ7L2Z9 268 aaPredicted RBP16.98■□□□□ 0.31
TNFRSF8-203ENST00000417814 SAMD9Q5K651 1589 aa16.98■□□□□ 0.31
TNFRSF8-203ENST00000417814 DISP1Q96F81 1524 aa16.98■□□□□ 0.31
TNFRSF8-203ENST00000417814 WDR62O43379 1518 aa16.98■□□□□ 0.31
TNFRSF8-203ENST00000417814 RNF123Q5XPI4 1314 aa16.97■□□□□ 0.31
TNFRSF8-203ENST00000417814 SRPK2P78362 688 aaKnown RBP16.97■□□□□ 0.31
TNFRSF8-203ENST00000417814 UPF2Q9HAU5 1272 aaKnown RBP16.96■□□□□ 0.31
TNFRSF8-203ENST00000417814 KIF14Q15058 1648 aa16.96■□□□□ 0.31
TNFRSF8-203ENST00000417814 KIF21AQ7Z4S6 1674 aa16.96■□□□□ 0.31
TNFRSF8-203ENST00000417814 ERBINQ96RT1 1412 aa16.96■□□□□ 0.31
TNFRSF8-203ENST00000417814 NUTM2FA1L443 756 aa16.95■□□□□ 0.3
TNFRSF8-203ENST00000417814 HSP90AA1P07900 732 aaKnown RBP16.95■□□□□ 0.3
TNFRSF8-203ENST00000417814 MTHFSP49914 203 aa16.95■□□□□ 0.3
TNFRSF8-203ENST00000417814 ITPRIPQ8IWB1 547 aa16.95■□□□□ 0.3
TNFRSF8-203ENST00000417814 CABP2Q9NPB3 220 aa16.95■□□□□ 0.3
TNFRSF8-203ENST00000417814 POGKQ9P215 609 aa16.95■□□□□ 0.3
TNFRSF8-203ENST00000417814 TCP11L2Q8N4U5 519 aa16.94■□□□□ 0.3
TNFRSF8-203ENST00000417814 GGNBP2Q9H3C7 697 aa16.94■□□□□ 0.3
TNFRSF8-203ENST00000417814 GRIN2AQ12879 1464 aa16.94■□□□□ 0.3
TNFRSF8-203ENST00000417814 MS4A1P11836 297 aa16.94■□□□□ 0.3
TNFRSF8-203ENST00000417814 STAG3Q9UJ98 1225 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms