RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
NPHP1-204ENST00000417665 RRBP1Q9P2E9 1410 aaKnown RBP8.02□□□□□ -1.13
NPHP1-204ENST00000417665 PLEKHD1A6NEE1 506 aa8.02□□□□□ -1.13
NPHP1-204ENST00000417665 HNRNPUQ00839 825 aaKnown RBP eCLIP8.02□□□□□ -1.13
NPHP1-204ENST00000417665 SCAPERQ9BY12 1400 aa8.01□□□□□ -1.13
NPHP1-204ENST00000417665 NCOA1Q15788 1441 aa8□□□□□ -1.13
NPHP1-204ENST00000417665 PPM1GO15355 546 aaPredicted RBP7.99□□□□□ -1.13
NPHP1-204ENST00000417665 B4GALNT3Q6L9W6 998 aa7.99□□□□□ -1.13
NPHP1-204ENST00000417665 PLCH2O75038 1416 aa7.99□□□□□ -1.13
NPHP1-204ENST00000417665 C3P01024 1663 aa7.99□□□□□ -1.13
NPHP1-204ENST00000417665 SLC24A1O60721 1099 aa7.98□□□□□ -1.13
NPHP1-204ENST00000417665 REREQ9P2R6 1566 aa7.98□□□□□ -1.13
NPHP1-204ENST00000417665 NEFMP07197 916 aa7.98□□□□□ -1.13
NPHP1-204ENST00000417665 CNKSR2Q8WXI2 1034 aa7.98□□□□□ -1.13
NPHP1-204ENST00000417665 TRAPPC8Q9Y2L5 1435 aa7.97□□□□□ -1.13
NPHP1-204ENST00000417665 KDM5CP41229 1560 aa7.97□□□□□ -1.13
NPHP1-204ENST00000417665 MED1Q15648 1581 aaPredicted RBP7.96□□□□□ -1.14
NPHP1-204ENST00000417665 DIP2CQ9Y2E4 1556 aa7.96□□□□□ -1.14
NPHP1-204ENST00000417665 ZNF518AQ6AHZ1 1483 aa7.96□□□□□ -1.14
NPHP1-204ENST00000417665 UBAP1LF5GYI3 381 aa7.95□□□□□ -1.14
NPHP1-204ENST00000417665 DAXXQ9UER7 740 aaPredicted RBP7.95□□□□□ -1.14
NPHP1-204ENST00000417665 AGLP35573 1532 aa7.95□□□□□ -1.14
NPHP1-204ENST00000417665 CCNB3Q8WWL7 1395 aa7.95□□□□□ -1.14
NPHP1-204ENST00000417665 RAB3GAP2Q9H2M9 1393 aa7.94□□□□□ -1.14
NPHP1-204ENST00000417665 GSE1Q14687 1217 aa7.94□□□□□ -1.14
NPHP1-204ENST00000417665 EFCAB2Q5VUJ9 269 aa7.94□□□□□ -1.14
NPHP1-204ENST00000417665 FAM43AQ8N2R8 423 aa7.94□□□□□ -1.14
NPHP1-204ENST00000417665 BRPF3Q9ULD4 1205 aa7.94□□□□□ -1.14
NPHP1-204ENST00000417665 ZNF335Q9H4Z2 1342 aaPredicted RBP7.94□□□□□ -1.14
NPHP1-204ENST00000417665 CAMSAP1Q5T5Y3 1602 aa7.94□□□□□ -1.14
NPHP1-204ENST00000417665 CDK13Q14004 1512 aaKnown RBP7.94□□□□□ -1.14
NPHP1-204ENST00000417665 MYO5CQ9NQX4 1742 aa7.94□□□□□ -1.14
NPHP1-204ENST00000417665 NPATQ14207 1427 aa7.93□□□□□ -1.14
NPHP1-204ENST00000417665 ABCA6Q8N139 1617 aa7.93□□□□□ -1.14
NPHP1-204ENST00000417665 CNTLNQ9NXG0 1405 aa7.93□□□□□ -1.14
NPHP1-204ENST00000417665 MLH3Q9UHC1 1453 aa7.93□□□□□ -1.14
NPHP1-204ENST00000417665 AFAP1Q8N556 730 aa7.93□□□□□ -1.14
NPHP1-204ENST00000417665 PODXL2Q9NZ53 605 aa7.92□□□□□ -1.14
NPHP1-204ENST00000417665 ZBED9Q6R2W3 1325 aa7.92□□□□□ -1.14
NPHP1-204ENST00000417665 PLA2R1Q13018 1463 aa7.92□□□□□ -1.14
NPHP1-204ENST00000417665 MROH2AA6NES4 1674 aa7.91□□□□□ -1.14
NPHP1-204ENST00000417665 NCKAP5LQ9HCH0 1330 aa7.91□□□□□ -1.14
NPHP1-204ENST00000417665 SETD5Q9C0A6 1442 aa7.91□□□□□ -1.14
NPHP1-204ENST00000417665 TCOF1Q13428 1488 aaKnown RBP7.91□□□□□ -1.14
NPHP1-204ENST00000417665 HSPA1LP34931 641 aa7.9□□□□□ -1.14
NPHP1-204ENST00000417665 MAPK8IP2Q13387 824 aaPredicted RBP7.9□□□□□ -1.14
NPHP1-204ENST00000417665 ZMYND15Q9H091 742 aa7.9□□□□□ -1.14
NPHP1-204ENST00000417665 LAS1LQ9Y4W2 734 aaKnown RBP7.9□□□□□ -1.14
NPHP1-204ENST00000417665 ZNF142P52746 1687 aaPredicted RBP7.9□□□□□ -1.14
NPHP1-204ENST00000417665 PKD2Q13563 968 aa7.9□□□□□ -1.15
NPHP1-204ENST00000417665 KIF14Q15058 1648 aa7.89□□□□□ -1.15
NPHP1-204ENST00000417665 ESF1Q9H501 851 aaKnown RBP7.89□□□□□ -1.15
NPHP1-204ENST00000417665 ARHGAP5Q13017 1502 aa7.89□□□□□ -1.15
NPHP1-204ENST00000417665 KANK4Q5T7N3 995 aaPredicted RBP7.88□□□□□ -1.15
NPHP1-204ENST00000417665 VSIG10Q8N0Z9 540 aa7.88□□□□□ -1.15
NPHP1-204ENST00000417665 DDRGK1Q96HY6 314 aa7.88□□□□□ -1.15
NPHP1-204ENST00000417665 ZMYM3Q14202 1370 aa7.87□□□□□ -1.15
NPHP1-204ENST00000417665 KIDINS220Q9ULH0 1771 aa7.87□□□□□ -1.15
NPHP1-204ENST00000417665 TCERG1O14776 1098 aaKnown RBP7.87□□□□□ -1.15
NPHP1-204ENST00000417665 SIN3AQ96ST3 1273 aa7.87□□□□□ -1.15
NPHP1-204ENST00000417665 HIRIP3Q9BW71 556 aaPredicted RBP7.87□□□□□ -1.15
NPHP1-204ENST00000417665 MYO3AQ8NEV4 1616 aa7.87□□□□□ -1.15
NPHP1-204ENST00000417665 RANGAP1P46060 587 aaPredicted RBP7.87□□□□□ -1.15
NPHP1-204ENST00000417665 ABCC1P33527 1531 aa7.87□□□□□ -1.15
NPHP1-204ENST00000417665 CDC42BPBQ9Y5S2 1711 aa7.87□□□□□ -1.15
NPHP1-204ENST00000417665 TROQ12816 1431 aaPredicted RBP7.87□□□□□ -1.15
NPHP1-204ENST00000417665 RNF123Q5XPI4 1314 aa7.86□□□□□ -1.15
NPHP1-204ENST00000417665 CEP170BQ9Y4F5 1589 aaPredicted RBP7.86□□□□□ -1.15
NPHP1-204ENST00000417665 SMG6Q86US8 1419 aaKnown RBP7.86□□□□□ -1.15
NPHP1-204ENST00000417665 CPS1P31327 1500 aa7.86□□□□□ -1.15
NPHP1-204ENST00000417665 ITSN2Q9NZM3 1697 aa7.86□□□□□ -1.15
NPHP1-204ENST00000417665 PTPRKQ15262 1439 aa7.85□□□□□ -1.15
NPHP1-204ENST00000417665 TOM1O60784 492 aa7.85□□□□□ -1.15
NPHP1-204ENST00000417665 NPM2Q86SE8 214 aaKnown RBP7.85□□□□□ -1.15
NPHP1-204ENST00000417665 FRAT1Q92837 279 aaPredicted RBP7.85□□□□□ -1.15
NPHP1-204ENST00000417665 SUPT6HQ7KZ85 1726 aaKnown RBP7.85□□□□□ -1.15
NPHP1-204ENST00000417665 ALKQ9UM73 1620 aa7.85□□□□□ -1.15
NPHP1-204ENST00000417665 RRP9O43818 475 aaKnown RBP7.84□□□□□ -1.15
NPHP1-204ENST00000417665 MS4A1P11836 297 aa7.84□□□□□ -1.15
NPHP1-204ENST00000417665 PLEKHG5O94827 1062 aa7.84□□□□□ -1.15
NPHP1-204ENST00000417665 PIP4K2BP78356 416 aa7.84□□□□□ -1.15
NPHP1-204ENST00000417665 TONSLQ96HA7 1378 aa7.84□□□□□ -1.15
NPHP1-204ENST00000417665 PREX2Q70Z35 1606 aa7.84□□□□□ -1.15
NPHP1-204ENST00000417665 NFKBIBQ15653 356 aa7.83□□□□□ -1.16
NPHP1-204ENST00000417665 FMN1Q68DA7 1419 aa7.83□□□□□ -1.16
NPHP1-204ENST00000417665 PDE4AP27815 886 aa7.83□□□□□ -1.16
NPHP1-204ENST00000417665 FOXD4L1Q9NU39 408 aa7.83□□□□□ -1.16
NPHP1-204ENST00000417665 SHANK2Q9UPX8 1470 aa7.83□□□□□ -1.16
NPHP1-204ENST00000417665 CLTCQ00610 1675 aaKnown RBP7.83□□□□□ -1.16
NPHP1-204ENST00000417665 NUDCQ9Y266 331 aa7.82□□□□□ -1.16
NPHP1-204ENST00000417665 A2ML1A8K2U0 1454 aa7.82□□□□□ -1.16
NPHP1-204ENST00000417665 SAMD9LQ8IVG5 1584 aa7.82□□□□□ -1.16
NPHP1-204ENST00000417665 NEURL4Q96JN8 1562 aa7.82□□□□□ -1.16
NPHP1-204ENST00000417665 PLXNC1O60486 1568 aa7.82□□□□□ -1.16
NPHP1-204ENST00000417665 HSP90AA2PQ14568 343 aaPredicted RBP7.82□□□□□ -1.16
NPHP1-204ENST00000417665 BACH2Q9BYV9 841 aa7.82□□□□□ -1.16
NPHP1-204ENST00000417665 DNMT1P26358 1616 aaKnown RBP7.81□□□□□ -1.16
NPHP1-204ENST00000417665 NCOA2Q15596 1464 aa7.81□□□□□ -1.16
NPHP1-204ENST00000417665 POLR1AO95602 1720 aaPredicted RBP7.81□□□□□ -1.16
NPHP1-204ENST00000417665 VWDEQ8N2E2 1590 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms