RNA–Protein interactions for RNA: ENST00000417463.1

AP000550.2-201, humanhuman

TSL 5 BASIC

Gene AP000550.2, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.2-201ENST00000417463 NPDC1Q9NQX5 325 aaPredicted RBP9.03□□□□□ -0.96
AP000550.2-201ENST00000417463 TSR1Q2NL82 804 aaKnown RBP9.02□□□□□ -0.97
AP000550.2-201ENST00000417463 CDHR5Q9HBB8 845 aa9□□□□□ -0.97
AP000550.2-201ENST00000417463 MINK1Q8N4C8 1332 aaPredicted RBP9□□□□□ -0.97
AP000550.2-201ENST00000417463 MAP2K5Q13163 448 aa8.99□□□□□ -0.97
AP000550.2-201ENST00000417463 SLC24A3Q9HC58 644 aa8.99□□□□□ -0.97
AP000550.2-201ENST00000417463 RBM27Q9P2N5 1060 aaKnown RBP8.99□□□□□ -0.97
AP000550.2-201ENST00000417463 PTPREP23469 700 aa8.98□□□□□ -0.97
AP000550.2-201ENST00000417463 KRI1Q8N9T8 703 aaKnown RBP8.98□□□□□ -0.97
AP000550.2-201ENST00000417463 FAM163AQ96GL9 167 aaPredicted RBP8.98□□□□□ -0.97
AP000550.2-201ENST00000417463 AK7Q96M32 723 aa8.98□□□□□ -0.97
AP000550.2-201ENST00000417463 ERBB3P21860 1342 aa8.98□□□□□ -0.97
AP000550.2-201ENST00000417463 EMP3P54852 163 aa8.97□□□□□ -0.97
AP000550.2-201ENST00000417463 IRF6O14896 467 aa8.96□□□□□ -0.98
AP000550.2-201ENST00000417463 PPP1R3GB7ZBB8 358 aa8.95□□□□□ -0.98
AP000550.2-201ENST00000417463 VARS2Q5ST30 1063 aaKnown RBP8.95□□□□□ -0.98
AP000550.2-201ENST00000417463 FECHP22830 423 aa8.94□□□□□ -0.98
AP000550.2-201ENST00000417463 LCE2DQ5TA82 110 aaPredicted RBP8.94□□□□□ -0.98
AP000550.2-201ENST00000417463 TTC13Q8NBP0 860 aa8.94□□□□□ -0.98
AP000550.2-201ENST00000417463 MARVELD3Q96A59 401 aa8.94□□□□□ -0.98
AP000550.2-201ENST00000417463 PBX2P40425 430 aa8.93□□□□□ -0.98
AP000550.2-201ENST00000417463 PRSS12P56730 875 aa8.93□□□□□ -0.98
AP000550.2-201ENST00000417463 ZNF687Q8N1G0 1237 aa8.93□□□□□ -0.98
AP000550.2-201ENST00000417463 KCNH8Q96L42 1107 aa8.93□□□□□ -0.98
AP000550.2-201ENST00000417463 ARHGAP33O14559 1287 aa8.92□□□□□ -0.98
AP000550.2-201ENST00000417463 COL9A1P20849 921 aa8.92□□□□□ -0.98
AP000550.2-201ENST00000417463 FAM205CA6NFA0 338 aa8.91□□□□□ -0.98
AP000550.2-201ENST00000417463 ONECUT3O60422 494 aaPredicted RBP8.91□□□□□ -0.98
AP000550.2-201ENST00000417463 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
AP000550.2-201ENST00000417463 CDCA7LQ96GN5 454 aa8.91□□□□□ -0.98
AP000550.2-201ENST00000417463 TRIM66O15016 1216 aa8.9□□□□□ -0.98
AP000550.2-201ENST00000417463 HS3ST6Q96QI5 342 aa8.9□□□□□ -0.98
AP000550.2-201ENST00000417463 PADI6Q6TGC4 694 aa8.89□□□□□ -0.99
AP000550.2-201ENST00000417463 KCNK17Q96T54 332 aa8.89□□□□□ -0.99
AP000550.2-201ENST00000417463 SLC4A5Q9BY07 1137 aa8.89□□□□□ -0.99
AP000550.2-201ENST00000417463 OATP04181 439 aa8.88□□□□□ -0.99
AP000550.2-201ENST00000417463 AMHR2Q16671 573 aa8.88□□□□□ -0.99
AP000550.2-201ENST00000417463 POTEEQ6S8J3 1075 aa8.88□□□□□ -0.99
AP000550.2-201ENST00000417463 POTEB3A0JP26 581 aa8.87□□□□□ -0.99
AP000550.2-201ENST00000417463 TRIM6-TRIM34B2RNG4 842 aa8.87□□□□□ -0.99
AP000550.2-201ENST00000417463 POTEBQ6S5H4 581 aa8.87□□□□□ -0.99
AP000550.2-201ENST00000417463 ZBED2Q9BTP6 218 aa8.87□□□□□ -0.99
AP000550.2-201ENST00000417463 PSEN2P49810 448 aa8.86□□□□□ -0.99
AP000550.2-201ENST00000417463 BRPF1P55201 1214 aaPredicted RBP8.86□□□□□ -0.99
AP000550.2-201ENST00000417463 ADGRG1Q9Y653 693 aa8.86□□□□□ -0.99
AP000550.2-201ENST00000417463 PDE4DQ08499 809 aa8.85□□□□□ -0.99
AP000550.2-201ENST00000417463 TSKSQ9UJT2 592 aa8.85□□□□□ -0.99
AP000550.2-201ENST00000417463 METTL3Q86U44 580 aaKnown RBP8.84□□□□□ -0.99
AP000550.2-201ENST00000417463 PACS2Q86VP3 889 aa8.84□□□□□ -0.99
AP000550.2-201ENST00000417463 PXYLP1Q8TE99 480 aa8.84□□□□□ -0.99
AP000550.2-201ENST00000417463 FAM198AQ9UFP1 575 aa8.84□□□□□ -0.99
AP000550.2-201ENST00000417463 RBM46Q8TBY0 533 aaKnown RBP8.83□□□□□ -1
AP000550.2-201ENST00000417463 NBPF26B4DH59 902 aa8.82□□□□□ -1
AP000550.2-201ENST00000417463 TK2O00142 265 aa8.82□□□□□ -1
AP000550.2-201ENST00000417463 NEUROD2Q15784 382 aa8.82□□□□□ -1
AP000550.2-201ENST00000417463 EYA1Q99502 592 aa8.82□□□□□ -1
AP000550.2-201ENST00000417463 RABGEF1Q9UJ41 708 aa8.82□□□□□ -1
AP000550.2-201ENST00000417463 AXIN2Q9Y2T1 843 aa8.82□□□□□ -1
AP000550.2-201ENST00000417463 PROX2Q3B8N5 592 aa8.81□□□□□ -1
AP000550.2-201ENST00000417463 DMRTA1Q5VZB9 504 aa8.81□□□□□ -1
AP000550.2-201ENST00000417463 TATDN2Q93075 761 aa8.8□□□□□ -1
AP000550.2-201ENST00000417463 PHOX2BQ99453 314 aa8.8□□□□□ -1
AP000550.2-201ENST00000417463 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
AP000550.2-201ENST00000417463 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.79□□□□□ -1
AP000550.2-201ENST00000417463 CLCN1P35523 988 aa8.79□□□□□ -1
AP000550.2-201ENST00000417463 FAM161AQ3B820 660 aa8.79□□□□□ -1
AP000550.2-201ENST00000417463 NUDT18Q6ZVK8 323 aa8.79□□□□□ -1
AP000550.2-201ENST00000417463 KIAA1468Q9P260 1216 aa8.79□□□□□ -1
AP000550.2-201ENST00000417463 VPS9D1Q9Y2B5 631 aa8.79□□□□□ -1
AP000550.2-201ENST00000417463 PARP9Q8IXQ6 854 aa8.78□□□□□ -1
AP000550.2-201ENST00000417463 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
AP000550.2-201ENST00000417463 PNMA3Q9UL41 463 aa8.78□□□□□ -1
AP000550.2-201ENST00000417463 KDM4CQ9H3R0 1056 aa8.77□□□□□ -1.01
AP000550.2-201ENST00000417463 GPCPD1Q9NPB8 672 aa8.77□□□□□ -1.01
AP000550.2-201ENST00000417463 BHMG1C9JSJ3 638 aaPredicted RBP8.76□□□□□ -1.01
AP000550.2-201ENST00000417463 C3orf80F5H4A9 247 aa8.76□□□□□ -1.01
AP000550.2-201ENST00000417463 LSM11P83369 360 aaKnown RBP eCLIP8.76□□□□□ -1.01
AP000550.2-201ENST00000417463 GPBP1L1Q9HC44 474 aaPredicted RBP8.76□□□□□ -1.01
AP000550.2-201ENST00000417463 RCCD1A6NED2 376 aa8.75□□□□□ -1.01
AP000550.2-201ENST00000417463 DNAJB2P25686 324 aa8.75□□□□□ -1.01
AP000550.2-201ENST00000417463 TTLL12Q14166 644 aaPredicted RBP8.75□□□□□ -1.01
AP000550.2-201ENST00000417463 LAPTM4BQ86VI4 370 aa8.75□□□□□ -1.01
AP000550.2-201ENST00000417463 MDM2Q00987 491 aaPredicted RBP8.74□□□□□ -1.01
AP000550.2-201ENST00000417463 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
AP000550.2-201ENST00000417463 ADGRD1Q6QNK2 874 aa8.74□□□□□ -1.01
AP000550.2-201ENST00000417463 GIGYF2Q6Y7W6 1299 aaKnown RBP8.74□□□□□ -1.01
AP000550.2-201ENST00000417463 NBPF3Q9H094 633 aa8.74□□□□□ -1.01
AP000550.2-201ENST00000417463 REPIN1Q9BWE0 567 aaKnown RBP8.73□□□□□ -1.01
AP000550.2-201ENST00000417463 TMEM134Q9H6X4 195 aa8.73□□□□□ -1.01
AP000550.2-201ENST00000417463 HRO43593 1189 aa8.72□□□□□ -1.01
AP000550.2-201ENST00000417463 FAM98CQ17RN3 349 aaKnown RBP8.72□□□□□ -1.01
AP000550.2-201ENST00000417463 SMAPO00193 183 aa8.71□□□□□ -1.02
AP000550.2-201ENST00000417463 POTEGQ6S5H5 508 aa8.71□□□□□ -1.02
AP000550.2-201ENST00000417463 DDRGK1Q96HY6 314 aa8.71□□□□□ -1.02
AP000550.2-201ENST00000417463 FAM217BQ9NTX9 383 aaPredicted RBP8.71□□□□□ -1.02
AP000550.2-201ENST00000417463 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
AP000550.2-201ENST00000417463 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
AP000550.2-201ENST00000417463 KRTAP3-2Q9BYR7 98 aa8.7□□□□□ -1.02
AP000550.2-201ENST00000417463 POTEMA6NI47 508 aa8.69□□□□□ -1.02
AP000550.2-201ENST00000417463 MS4A1P11836 297 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms