RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.3■□□□□ 0.36
LRRTM1-205ENST00000417012 ARID4BQ4LE39 1312 aaPredicted RBP17.29■□□□□ 0.36
LRRTM1-205ENST00000417012 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
LRRTM1-205ENST00000417012 BCORL1Q5H9F3 1711 aa17.28■□□□□ 0.36
LRRTM1-205ENST00000417012 CCDC136Q96JN2 1154 aa17.28■□□□□ 0.36
LRRTM1-205ENST00000417012 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
LRRTM1-205ENST00000417012 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.35
LRRTM1-205ENST00000417012 MYO5CQ9NQX4 1742 aa17.27■□□□□ 0.35
LRRTM1-205ENST00000417012 RSPH4AQ5TD94 716 aa17.26■□□□□ 0.35
LRRTM1-205ENST00000417012 DCAF11Q8TEB1 546 aa17.26■□□□□ 0.35
LRRTM1-205ENST00000417012 ROCK2O75116 1388 aaKnown RBP17.26■□□□□ 0.35
LRRTM1-205ENST00000417012 KDM5CP41229 1560 aa17.26■□□□□ 0.35
LRRTM1-205ENST00000417012 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
LRRTM1-205ENST00000417012 ZCCHC11Q5TAX3 1644 aaKnown RBP17.25■□□□□ 0.35
LRRTM1-205ENST00000417012 CLASP1Q7Z460 1538 aa17.24■□□□□ 0.35
LRRTM1-205ENST00000417012 ARHGEF12Q9NZN5 1544 aa17.24■□□□□ 0.35
LRRTM1-205ENST00000417012 TMC1Q8TDI8 760 aa17.23■□□□□ 0.35
LRRTM1-205ENST00000417012 CARD11Q9BXL7 1154 aa17.23■□□□□ 0.35
LRRTM1-205ENST00000417012 ANP32AP39687 249 aaKnown RBP17.22■□□□□ 0.35
LRRTM1-205ENST00000417012 RGL3Q3MIN7 710 aa17.21■□□□□ 0.35
LRRTM1-205ENST00000417012 PNISRQ8TF01 805 aaKnown RBP17.21■□□□□ 0.35
LRRTM1-205ENST00000417012 RALGAPBQ86X10 1494 aa17.21■□□□□ 0.35
LRRTM1-205ENST00000417012 PLEKHH2Q8IVE3 1493 aa17.2■□□□□ 0.34
LRRTM1-205ENST00000417012 DEKP35659 375 aaKnown RBP17.2■□□□□ 0.34
LRRTM1-205ENST00000417012 UHRF1BP1Q6BDS2 1440 aa17.2■□□□□ 0.34
LRRTM1-205ENST00000417012 PLCH2O75038 1416 aa17.18■□□□□ 0.34
LRRTM1-205ENST00000417012 MAST1Q9Y2H9 1570 aa17.18■□□□□ 0.34
LRRTM1-205ENST00000417012 PAK3O75914 559 aaPredicted RBP17.17■□□□□ 0.34
LRRTM1-205ENST00000417012 ST20-MTHFSA0A0A6YYL1 179 aa17.17■□□□□ 0.34
LRRTM1-205ENST00000417012 EFCAB2Q5VUJ9 269 aa17.17■□□□□ 0.34
LRRTM1-205ENST00000417012 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
LRRTM1-205ENST00000417012 NBR1Q14596 966 aa17.16■□□□□ 0.34
LRRTM1-205ENST00000417012 IPO9Q96P70 1041 aaKnown RBP17.15■□□□□ 0.34
LRRTM1-205ENST00000417012 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
LRRTM1-205ENST00000417012 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
LRRTM1-205ENST00000417012 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
LRRTM1-205ENST00000417012 BRD4O60885 1362 aaPredicted RBP17.15■□□□□ 0.34
LRRTM1-205ENST00000417012 PLA2R1Q13018 1463 aa17.15■□□□□ 0.34
LRRTM1-205ENST00000417012 UNC13BO14795 1591 aa17.15■□□□□ 0.34
LRRTM1-205ENST00000417012 UHRF1BP1LA0JNW5 1464 aa17.14■□□□□ 0.33
LRRTM1-205ENST00000417012 LRPPRCP42704 1394 aaKnown RBP17.14■□□□□ 0.33
LRRTM1-205ENST00000417012 AFAP1Q8N556 730 aa17.14■□□□□ 0.33
LRRTM1-205ENST00000417012 MYBBP1AQ9BQG0 1328 aaKnown RBP17.14■□□□□ 0.33
LRRTM1-205ENST00000417012 PLXNC1O60486 1568 aa17.14■□□□□ 0.33
LRRTM1-205ENST00000417012 RALBP1Q15311 655 aa17.13■□□□□ 0.33
LRRTM1-205ENST00000417012 NBPF1Q3BBV0 1214 aa17.11■□□□□ 0.33
LRRTM1-205ENST00000417012 ZBTB47Q9UFB7 747 aaPredicted RBP17.11■□□□□ 0.33
LRRTM1-205ENST00000417012 DUOX2Q9NRD8 1548 aa17.11■□□□□ 0.33
LRRTM1-205ENST00000417012 ABCC1P33527 1531 aa17.11■□□□□ 0.33
LRRTM1-205ENST00000417012 IQGAP3Q86VI3 1631 aa17.1■□□□□ 0.33
LRRTM1-205ENST00000417012 RRP1P56182 461 aaKnown RBP17.09■□□□□ 0.33
LRRTM1-205ENST00000417012 PRAG1Q86YV5 1406 aa17.08■□□□□ 0.32
LRRTM1-205ENST00000417012 RTL5Q5HYW3 569 aaPredicted RBP17.08■□□□□ 0.32
LRRTM1-205ENST00000417012 SPAG9O60271 1321 aaKnown RBP17.08■□□□□ 0.32
LRRTM1-205ENST00000417012 E9PCH4 1651 aa17.07■□□□□ 0.32
LRRTM1-205ENST00000417012 A2MP01023 1474 aa17.07■□□□□ 0.32
LRRTM1-205ENST00000417012 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
LRRTM1-205ENST00000417012 TRPM1Q7Z4N2 1603 aa17.05■□□□□ 0.32
LRRTM1-205ENST00000417012 RCAN3Q9UKA8 241 aa17.05■□□□□ 0.32
LRRTM1-205ENST00000417012 NLRP13Q86W25 1043 aa17.04■□□□□ 0.32
LRRTM1-205ENST00000417012 WDR7Q9Y4E6 1490 aa17.04■□□□□ 0.32
LRRTM1-205ENST00000417012 MAGI2Q86UL8 1455 aa17.03■□□□□ 0.32
LRRTM1-205ENST00000417012 TCERG1O14776 1098 aaKnown RBP17.03■□□□□ 0.32
LRRTM1-205ENST00000417012 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
LRRTM1-205ENST00000417012 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
LRRTM1-205ENST00000417012 FANCAO15360 1455 aa17.01■□□□□ 0.31
LRRTM1-205ENST00000417012 PARD3Q8TEW0 1356 aa17.01■□□□□ 0.31
LRRTM1-205ENST00000417012 ZFYVE16Q7Z3T8 1539 aa17■□□□□ 0.31
LRRTM1-205ENST00000417012 SALL2Q9Y467 1007 aaPredicted RBP17■□□□□ 0.31
LRRTM1-205ENST00000417012 NPM2Q86SE8 214 aaKnown RBP16.99■□□□□ 0.31
LRRTM1-205ENST00000417012 SCAPERQ9BY12 1400 aa16.97■□□□□ 0.31
LRRTM1-205ENST00000417012 ASXL2Q76L83 1435 aa16.97■□□□□ 0.31
LRRTM1-205ENST00000417012 ATP10AO60312 1499 aa16.96■□□□□ 0.31
LRRTM1-205ENST00000417012 MS4A1P11836 297 aa16.96■□□□□ 0.31
LRRTM1-205ENST00000417012 KIF3BO15066 747 aa16.96■□□□□ 0.3
LRRTM1-205ENST00000417012 PDE4AP27815 886 aa16.96■□□□□ 0.3
LRRTM1-205ENST00000417012 RTEL1-TNFRSF6BF6WH68 1400 aa16.96■□□□□ 0.3
LRRTM1-205ENST00000417012 ABCA9Q8IUA7 1624 aa16.95■□□□□ 0.3
LRRTM1-205ENST00000417012 ARAP3Q8WWN8 1544 aa16.95■□□□□ 0.3
LRRTM1-205ENST00000417012 DISP3Q9P2K9 1392 aa16.95■□□□□ 0.3
LRRTM1-205ENST00000417012 ADGRL1O94910 1474 aa16.95■□□□□ 0.3
LRRTM1-205ENST00000417012 TESK2Q96S53 571 aa16.94■□□□□ 0.3
LRRTM1-205ENST00000417012 GPRASP1Q5JY77 1395 aa16.94■□□□□ 0.3
LRRTM1-205ENST00000417012 ATP7AQ04656 1500 aa16.94■□□□□ 0.3
LRRTM1-205ENST00000417012 PRDM15P57071 1507 aaPredicted RBP16.93■□□□□ 0.3
LRRTM1-205ENST00000417012 BACH2Q9BYV9 841 aa16.93■□□□□ 0.3
LRRTM1-205ENST00000417012 WASHC2CQ9Y4E1 1318 aa16.92■□□□□ 0.3
LRRTM1-205ENST00000417012 ANO8Q9HCE9 1232 aaPredicted RBP16.92■□□□□ 0.3
LRRTM1-205ENST00000417012 COL17A1Q9UMD9 1497 aaPredicted RBP16.92■□□□□ 0.3
LRRTM1-205ENST00000417012 INSRP06213 1382 aa16.92■□□□□ 0.3
LRRTM1-205ENST00000417012 PER1O15534 1290 aaPredicted RBP16.91■□□□□ 0.3
LRRTM1-205ENST00000417012 CDCA7LQ96GN5 454 aa16.91■□□□□ 0.3
LRRTM1-205ENST00000417012 ZMYM4Q5VZL5 1548 aa16.91■□□□□ 0.3
LRRTM1-205ENST00000417012 INO80Q9ULG1 1556 aaPredicted RBP16.91■□□□□ 0.3
LRRTM1-205ENST00000417012 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
LRRTM1-205ENST00000417012 EIF2AK4Q9P2K8 1649 aaKnown RBP16.9■□□□□ 0.3
LRRTM1-205ENST00000417012 BLMP54132 1417 aaPredicted RBP16.9■□□□□ 0.3
LRRTM1-205ENST00000417012 SPHKAPQ2M3C7 1700 aa16.89■□□□□ 0.3
LRRTM1-205ENST00000417012 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.29
LRRTM1-205ENST00000417012 DEPDC5O75140 1603 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms