RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 CFAP44Q96MT7 982 aa10.28□□□□□ -0.76
ATG4AP1-201ENST00000416893 GOLGA8CPA6NN73 597 aa10.27□□□□□ -0.77
ATG4AP1-201ENST00000416893 PTPN5P54829 565 aa10.27□□□□□ -0.77
ATG4AP1-201ENST00000416893 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
ATG4AP1-201ENST00000416893 COL9A1P20849 921 aa10.25□□□□□ -0.77
ATG4AP1-201ENST00000416893 THSD4Q6ZMP0 1018 aa10.25□□□□□ -0.77
ATG4AP1-201ENST00000416893 WNT2BQ93097 391 aa10.24□□□□□ -0.77
ATG4AP1-201ENST00000416893 EPAS1Q99814 870 aa10.24□□□□□ -0.77
ATG4AP1-201ENST00000416893 PROX2Q3B8N5 592 aa10.23□□□□□ -0.77
ATG4AP1-201ENST00000416893 RABGEF1Q9UJ41 708 aa10.22□□□□□ -0.77
ATG4AP1-201ENST00000416893 C6orf132Q5T0Z8 1188 aa10.2□□□□□ -0.78
ATG4AP1-201ENST00000416893 DDX12PQ92771 950 aa10.19□□□□□ -0.78
ATG4AP1-201ENST00000416893 PDIA6Q15084 440 aa10.17□□□□□ -0.78
ATG4AP1-201ENST00000416893 RBM33Q96EV2 1170 aaKnown RBP10.17□□□□□ -0.78
ATG4AP1-201ENST00000416893 CCDC180Q9P1Z9 1646 aa10.17□□□□□ -0.78
ATG4AP1-201ENST00000416893 ONECUT3O60422 494 aaPredicted RBP10.15□□□□□ -0.78
ATG4AP1-201ENST00000416893 LAPTM4BQ86VI4 370 aa10.15□□□□□ -0.78
ATG4AP1-201ENST00000416893 ANKK1Q8NFD2 765 aa10.15□□□□□ -0.78
ATG4AP1-201ENST00000416893 KIAA1468Q9P260 1216 aa10.15□□□□□ -0.78
ATG4AP1-201ENST00000416893 SPDYE16A6NNV3 312 aaPredicted RBP10.13□□□□□ -0.79
ATG4AP1-201ENST00000416893 NBR1Q14596 966 aa10.13□□□□□ -0.79
ATG4AP1-201ENST00000416893 E2F4Q16254 413 aa10.13□□□□□ -0.79
ATG4AP1-201ENST00000416893 TRIM6-TRIM34B2RNG4 842 aa10.12□□□□□ -0.79
ATG4AP1-201ENST00000416893 EN1Q05925 392 aaPredicted RBP10.12□□□□□ -0.79
ATG4AP1-201ENST00000416893 IFFO2Q5TF58 517 aa10.12□□□□□ -0.79
ATG4AP1-201ENST00000416893 WDR70Q9NW82 654 aa10.11□□□□□ -0.79
ATG4AP1-201ENST00000416893 MAP3K7O43318 606 aa10.1□□□□□ -0.79
ATG4AP1-201ENST00000416893 BCAMP50895 628 aa10.1□□□□□ -0.79
ATG4AP1-201ENST00000416893 ZFRQ96KR1 1074 aaKnown RBP10.1□□□□□ -0.79
ATG4AP1-201ENST00000416893 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
ATG4AP1-201ENST00000416893 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
ATG4AP1-201ENST00000416893 SOWAHBA6NEL2 793 aa10.09□□□□□ -0.79
ATG4AP1-201ENST00000416893 PLCB2Q00722 1185 aa10.09□□□□□ -0.79
ATG4AP1-201ENST00000416893 TSR1Q2NL82 804 aaKnown RBP10.09□□□□□ -0.79
ATG4AP1-201ENST00000416893 FAM98CQ17RN3 349 aaKnown RBP10.06□□□□□ -0.8
ATG4AP1-201ENST00000416893 TSKSQ9UJT2 592 aa10.05□□□□□ -0.8
ATG4AP1-201ENST00000416893 A0A0G2JS52 829 aa10.04□□□□□ -0.8
ATG4AP1-201ENST00000416893 GRXCR2A6NFK2 248 aa10.04□□□□□ -0.8
ATG4AP1-201ENST00000416893 NYAP1Q6ZVC0 841 aa10.04□□□□□ -0.8
ATG4AP1-201ENST00000416893 TSHZ2Q9NRE2 1034 aa10.04□□□□□ -0.8
ATG4AP1-201ENST00000416893 PACS2Q86VP3 889 aa10.03□□□□□ -0.8
ATG4AP1-201ENST00000416893 WBP1LQ9NX94 342 aa10.03□□□□□ -0.8
ATG4AP1-201ENST00000416893 RGS20O76081 388 aa10.02□□□□□ -0.81
ATG4AP1-201ENST00000416893 ITGBL1O95965 494 aaPredicted RBP10.02□□□□□ -0.81
ATG4AP1-201ENST00000416893 PRIM1P49642 420 aaKnown RBP10.02□□□□□ -0.81
ATG4AP1-201ENST00000416893 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.02□□□□□ -0.81
ATG4AP1-201ENST00000416893 CERKQ8TCT0 537 aa10.01□□□□□ -0.81
ATG4AP1-201ENST00000416893 CDCA7LQ96GN5 454 aa10.01□□□□□ -0.81
ATG4AP1-201ENST00000416893 LRCH3Q96II8 777 aa10.01□□□□□ -0.81
ATG4AP1-201ENST00000416893 PRSS12P56730 875 aa10□□□□□ -0.81
ATG4AP1-201ENST00000416893 TSR3Q9UJK0 312 aaKnown RBP9.99□□□□□ -0.81
ATG4AP1-201ENST00000416893 HPS5Q9UPZ3 1129 aa9.99□□□□□ -0.81
ATG4AP1-201ENST00000416893 OSBPP22059 807 aa9.98□□□□□ -0.81
ATG4AP1-201ENST00000416893 FAM198AQ9UFP1 575 aa9.97□□□□□ -0.81
ATG4AP1-201ENST00000416893 SMAPO00193 183 aa9.96□□□□□ -0.82
ATG4AP1-201ENST00000416893 CDHR5Q9HBB8 845 aa9.96□□□□□ -0.82
ATG4AP1-201ENST00000416893 ABCC9O60706 1549 aa9.94□□□□□ -0.82
ATG4AP1-201ENST00000416893 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
ATG4AP1-201ENST00000416893 KCNC4Q03721 635 aa9.94□□□□□ -0.82
ATG4AP1-201ENST00000416893 PNMA3Q9UL41 463 aa9.94□□□□□ -0.82
ATG4AP1-201ENST00000416893 C3orf80F5H4A9 247 aa9.93□□□□□ -0.82
ATG4AP1-201ENST00000416893 HAP1P54257 671 aaPredicted RBP9.93□□□□□ -0.82
ATG4AP1-201ENST00000416893 SAMD7Q7Z3H4 446 aa9.93□□□□□ -0.82
ATG4AP1-201ENST00000416893 TATDN2Q93075 761 aa9.93□□□□□ -0.82
ATG4AP1-201ENST00000416893 PPP4CP60510 307 aa9.92□□□□□ -0.82
ATG4AP1-201ENST00000416893 RBM27Q9P2N5 1060 aaKnown RBP9.92□□□□□ -0.82
ATG4AP1-201ENST00000416893 SLC24A1O60721 1099 aa9.9□□□□□ -0.82
ATG4AP1-201ENST00000416893 NUDT18Q6ZVK8 323 aa9.89□□□□□ -0.83
ATG4AP1-201ENST00000416893 IRX2Q9BZI1 471 aaPredicted RBP9.89□□□□□ -0.83
ATG4AP1-201ENST00000416893 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
ATG4AP1-201ENST00000416893 NPDC1Q9NQX5 325 aaPredicted RBP9.88□□□□□ -0.83
ATG4AP1-201ENST00000416893 P3H3Q8IVL6 736 aa9.87□□□□□ -0.83
ATG4AP1-201ENST00000416893 TTC13Q8NBP0 860 aa9.87□□□□□ -0.83
ATG4AP1-201ENST00000416893 PADI6Q6TGC4 694 aa9.86□□□□□ -0.83
ATG4AP1-201ENST00000416893 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
ATG4AP1-201ENST00000416893 KCNV2Q8TDN2 545 aa9.85□□□□□ -0.83
ATG4AP1-201ENST00000416893 MLLT3P42568 568 aaPredicted RBP9.84□□□□□ -0.83
ATG4AP1-201ENST00000416893 RNF40O75150 1001 aa9.83□□□□□ -0.84
ATG4AP1-201ENST00000416893 TJAP1Q5JTD0 557 aa9.83□□□□□ -0.84
ATG4AP1-201ENST00000416893 SWT1Q5T5J6 900 aaKnown RBP9.8□□□□□ -0.84
ATG4AP1-201ENST00000416893 MTRQ99707 1265 aa9.8□□□□□ -0.84
ATG4AP1-201ENST00000416893 IL21Q9HBE4 155 aa9.8□□□□□ -0.84
ATG4AP1-201ENST00000416893 VSIG10Q8N0Z9 540 aa9.79□□□□□ -0.84
ATG4AP1-201ENST00000416893 APLP1P51693 650 aa9.78□□□□□ -0.84
ATG4AP1-201ENST00000416893 SLF2Q8IX21 1173 aa9.78□□□□□ -0.84
ATG4AP1-201ENST00000416893 NECTIN2Q92692 538 aa9.78□□□□□ -0.84
ATG4AP1-201ENST00000416893 EYA1Q99502 592 aa9.78□□□□□ -0.84
ATG4AP1-201ENST00000416893 PTGDRQ13258 359 aa9.76□□□□□ -0.85
ATG4AP1-201ENST00000416893 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
ATG4AP1-201ENST00000416893 ZNF516Q92618 1163 aa9.74□□□□□ -0.85
ATG4AP1-201ENST00000416893 KDM2AQ9Y2K7 1162 aa9.74□□□□□ -0.85
ATG4AP1-201ENST00000416893 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
ATG4AP1-201ENST00000416893 NUTM2FA1L443 756 aa9.71□□□□□ -0.86
ATG4AP1-201ENST00000416893 DNAJB2P25686 324 aa9.7□□□□□ -0.86
ATG4AP1-201ENST00000416893 COPS2P61201 443 aa9.7□□□□□ -0.86
ATG4AP1-201ENST00000416893 RBM46Q8TBY0 533 aaKnown RBP9.7□□□□□ -0.86
ATG4AP1-201ENST00000416893 SEMA3EO15041 775 aa9.69□□□□□ -0.86
ATG4AP1-201ENST00000416893 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.69□□□□□ -0.86
ATG4AP1-201ENST00000416893 ADGRG1Q9Y653 693 aa9.69□□□□□ -0.86
ATG4AP1-201ENST00000416893 Q6ZNB5 142 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms