RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 MS4A1P11836 297 aa19.41■□□□□ 0.7
NCKIPSD-204ENST00000416649 RCAN3Q9UKA8 241 aa19.41■□□□□ 0.7
NCKIPSD-204ENST00000416649 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.39■□□□□ 0.693e-6■■□□□ 13.5
NCKIPSD-204ENST00000416649 PLIN1O60240 522 aa19.38■□□□□ 0.69
NCKIPSD-204ENST00000416649 FRAT2O75474 233 aaPredicted RBP19.38■□□□□ 0.69
NCKIPSD-204ENST00000416649 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
NCKIPSD-204ENST00000416649 DCAF11Q8TEB1 546 aa19.36■□□□□ 0.69
NCKIPSD-204ENST00000416649 DENND4BO75064 1496 aaPredicted RBP19.36■□□□□ 0.69
NCKIPSD-204ENST00000416649 PKD2Q13563 968 aa19.35■□□□□ 0.69
NCKIPSD-204ENST00000416649 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
NCKIPSD-204ENST00000416649 FAM43AQ8N2R8 423 aa19.34■□□□□ 0.69
NCKIPSD-204ENST00000416649 ABCC10Q5T3U5 1492 aa19.33■□□□□ 0.69
NCKIPSD-204ENST00000416649 ARXQ96QS3 562 aa19.32■□□□□ 0.68
NCKIPSD-204ENST00000416649 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
NCKIPSD-204ENST00000416649 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
NCKIPSD-204ENST00000416649 OSCARQ8IYS5 282 aa19.3■□□□□ 0.68
NCKIPSD-204ENST00000416649 C9orf84Q5VXU9 1444 aa19.3■□□□□ 0.68
NCKIPSD-204ENST00000416649 NUP155O75694 1391 aa19.3■□□□□ 0.68
NCKIPSD-204ENST00000416649 ROCK1Q13464 1354 aa19.3■□□□□ 0.68
NCKIPSD-204ENST00000416649 DHX29Q7Z478 1369 aaKnown RBP19.3■□□□□ 0.68
NCKIPSD-204ENST00000416649 KDM2AQ9Y2K7 1162 aa19.29■□□□□ 0.68
NCKIPSD-204ENST00000416649 GCC2Q8IWJ2 1684 aa19.29■□□□□ 0.68
NCKIPSD-204ENST00000416649 VSIG10Q8N0Z9 540 aa19.29■□□□□ 0.68
NCKIPSD-204ENST00000416649 ITSN2Q9NZM3 1697 aa19.29■□□□□ 0.68
NCKIPSD-204ENST00000416649 ARHGAP5Q13017 1502 aa19.28■□□□□ 0.68
NCKIPSD-204ENST00000416649 ANKRD50Q9ULJ7 1429 aa19.28■□□□□ 0.68
NCKIPSD-204ENST00000416649 GLIPR1L2Q4G1C9 344 aa19.28■□□□□ 0.68
NCKIPSD-204ENST00000416649 SHROOM2Q13796 1616 aa19.28■□□□□ 0.68
NCKIPSD-204ENST00000416649 CRBNQ96SW2 442 aa19.27■□□□□ 0.68
NCKIPSD-204ENST00000416649 CDCA7LQ96GN5 454 aa19.27■□□□□ 0.67
NCKIPSD-204ENST00000416649 KIF15Q9NS87 1388 aa19.26■□□□□ 0.67
NCKIPSD-204ENST00000416649 ABCC2Q92887 1545 aa19.26■□□□□ 0.67
NCKIPSD-204ENST00000416649 TTC37Q6PGP7 1564 aa19.25■□□□□ 0.67
NCKIPSD-204ENST00000416649 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
NCKIPSD-204ENST00000416649 ADCY10Q96PN6 1610 aa19.25■□□□□ 0.67
NCKIPSD-204ENST00000416649 AFAP1Q8N556 730 aa19.24■□□□□ 0.67
NCKIPSD-204ENST00000416649 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.22■□□□□ 0.67
NCKIPSD-204ENST00000416649 ANKRD30BQ9BXX2 1392 aa19.22■□□□□ 0.67
NCKIPSD-204ENST00000416649 NAP1L5Q96NT1 182 aaPredicted RBP19.21■□□□□ 0.67
NCKIPSD-204ENST00000416649 RRAGDQ9NQL2 400 aaPredicted RBP19.21■□□□□ 0.67
NCKIPSD-204ENST00000416649 SPATA31E1Q6ZUB1 1445 aa19.21■□□□□ 0.67
NCKIPSD-204ENST00000416649 RGS3P49796 1198 aa19.21■□□□□ 0.67
NCKIPSD-204ENST00000416649 SYCP2Q9BX26 1530 aa19.21■□□□□ 0.67
NCKIPSD-204ENST00000416649 POGKQ9P215 609 aa19.21■□□□□ 0.67
NCKIPSD-204ENST00000416649 SAMD9LQ8IVG5 1584 aa19.19■□□□□ 0.66
NCKIPSD-204ENST00000416649 RGL3Q3MIN7 710 aa19.19■□□□□ 0.66
NCKIPSD-204ENST00000416649 EFCAB2Q5VUJ9 269 aa19.19■□□□□ 0.66
NCKIPSD-204ENST00000416649 ZMYND15Q9H091 742 aa19.19■□□□□ 0.66
NCKIPSD-204ENST00000416649 CDC42BPBQ9Y5S2 1711 aa19.19■□□□□ 0.66
NCKIPSD-204ENST00000416649 MBD5Q9P267 1494 aa19.18■□□□□ 0.66
NCKIPSD-204ENST00000416649 USP47Q96K76 1375 aa19.18■□□□□ 0.66
NCKIPSD-204ENST00000416649 PZPP20742 1482 aa19.18■□□□□ 0.66
NCKIPSD-204ENST00000416649 ZCCHC11Q5TAX3 1644 aaKnown RBP19.16■□□□□ 0.66
NCKIPSD-204ENST00000416649 NPM1P06748 294 aaKnown RBP eCLIP19.16■□□□□ 0.66
NCKIPSD-204ENST00000416649 C20orf194Q5TEA3 1177 aa19.16■□□□□ 0.66
NCKIPSD-204ENST00000416649 FAM161AQ3B820 660 aa19.15■□□□□ 0.66
NCKIPSD-204ENST00000416649 CCDC141Q6ZP82 1450 aa19.14■□□□□ 0.65
NCKIPSD-204ENST00000416649 MYBBP1AQ9BQG0 1328 aaKnown RBP19.13■□□□□ 0.65
NCKIPSD-204ENST00000416649 CYB5RLQ6IPT4 315 aa19.13■□□□□ 0.65
NCKIPSD-204ENST00000416649 SLKQ9H2G2 1235 aaPredicted RBP19.13■□□□□ 0.65
NCKIPSD-204ENST00000416649 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
NCKIPSD-204ENST00000416649 RPRD2Q5VT52 1461 aaKnown RBP19.11■□□□□ 0.65
NCKIPSD-204ENST00000416649 LRPPRCP42704 1394 aaKnown RBP19.11■□□□□ 0.65
NCKIPSD-204ENST00000416649 HSP90AA2PQ14568 343 aaPredicted RBP19.11■□□□□ 0.65
NCKIPSD-204ENST00000416649 C8orf34Q49A92 452 aa19.11■□□□□ 0.65
NCKIPSD-204ENST00000416649 ADGRL2O95490 1459 aa19.11■□□□□ 0.65
NCKIPSD-204ENST00000416649 PREX2Q70Z35 1606 aa19.1■□□□□ 0.65
NCKIPSD-204ENST00000416649 TRAPPC8Q9Y2L5 1435 aa19.1■□□□□ 0.65
NCKIPSD-204ENST00000416649 CROCC2H7BZ55 1655 aa19.1■□□□□ 0.65
NCKIPSD-204ENST00000416649 ADGBQ8N7X0 1667 aa19.1■□□□□ 0.65
NCKIPSD-204ENST00000416649 TEX14Q8IWB6 1497 aa19.1■□□□□ 0.65
NCKIPSD-204ENST00000416649 PDE3BQ13370 1112 aa19.09■□□□□ 0.65
NCKIPSD-204ENST00000416649 KIAA1107Q9UPP5 1409 aa19.09■□□□□ 0.65
NCKIPSD-204ENST00000416649 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
NCKIPSD-204ENST00000416649 BRD4O60885 1362 aaPredicted RBP19.08■□□□□ 0.65
NCKIPSD-204ENST00000416649 PLEKHH2Q8IVE3 1493 aa19.08■□□□□ 0.65
NCKIPSD-204ENST00000416649 SPAG9O60271 1321 aaKnown RBP19.08■□□□□ 0.64
NCKIPSD-204ENST00000416649 PLCH2O75038 1416 aa19.08■□□□□ 0.64
NCKIPSD-204ENST00000416649 RSPH4AQ5TD94 716 aa19.07■□□□□ 0.64
NCKIPSD-204ENST00000416649 KTN1Q86UP2 1357 aaKnown RBP19.07■□□□□ 0.64
NCKIPSD-204ENST00000416649 HSP90AA1P07900 732 aaKnown RBP19.06■□□□□ 0.64
NCKIPSD-204ENST00000416649 CARD11Q9BXL7 1154 aa19.06■□□□□ 0.64
NCKIPSD-204ENST00000416649 ARID4BQ4LE39 1312 aaPredicted RBP19.06■□□□□ 0.64
NCKIPSD-204ENST00000416649 BCORL1Q5H9F3 1711 aa19.05■□□□□ 0.64
NCKIPSD-204ENST00000416649 RALBP1Q15311 655 aa19.05■□□□□ 0.64
NCKIPSD-204ENST00000416649 CENPQQ7L2Z9 268 aaPredicted RBP19.05■□□□□ 0.64
NCKIPSD-204ENST00000416649 ASXL2Q76L83 1435 aa19.05■□□□□ 0.64
NCKIPSD-204ENST00000416649 L1TD1Q5T7N2 865 aaKnown RBP19.04■□□□□ 0.64
NCKIPSD-204ENST00000416649 MYO5CQ9NQX4 1742 aa19.04■□□□□ 0.64
NCKIPSD-204ENST00000416649 GZF1Q9H116 711 aaPredicted RBP19.04■□□□□ 0.64
NCKIPSD-204ENST00000416649 POLR1AO95602 1720 aaPredicted RBP19.03■□□□□ 0.64
NCKIPSD-204ENST00000416649 ST20-MTHFSA0A0A6YYL1 179 aa19.03■□□□□ 0.64
NCKIPSD-204ENST00000416649 NLRP13Q86W25 1043 aa19.03■□□□□ 0.64
NCKIPSD-204ENST00000416649 SHANK2Q9UPX8 1470 aa19.02■□□□□ 0.64
NCKIPSD-204ENST00000416649 WDR7Q9Y4E6 1490 aa19.02■□□□□ 0.64
NCKIPSD-204ENST00000416649 KDM2BQ8NHM5 1336 aa19.02■□□□□ 0.63
NCKIPSD-204ENST00000416649 UHRF1BP1LA0JNW5 1464 aa19.02■□□□□ 0.63
NCKIPSD-204ENST00000416649 CC2D1BQ5T0F9 858 aaKnown RBP19.01■□□□□ 0.63
NCKIPSD-204ENST00000416649 ROCK2O75116 1388 aaKnown RBP19■□□□□ 0.63
NCKIPSD-204ENST00000416649 KIF3BO15066 747 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms