RNA–Protein interactions for RNA: ENST00000415839.2

PMS2-205, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 5

Gene PMS2, Length 924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-205ENST00000415839 ADAM33Q9BZ11 813 aa9.97□□□□□ -0.81
PMS2-205ENST00000415839 LCE2AQ5TA79 106 aaPredicted RBP9.96□□□□□ -0.82
PMS2-205ENST00000415839 EMILIN3Q9NT22 766 aa9.96□□□□□ -0.82
PMS2-205ENST00000415839 CADPS2Q86UW7 1296 aa9.95□□□□□ -0.82
PMS2-205ENST00000415839 MRPL50Q8N5N7 158 aaKnown RBP9.91□□□□□ -0.82
PMS2-205ENST00000415839 PCDHGA10Q9Y5H3 936 aa9.91□□□□□ -0.82
PMS2-205ENST00000415839 GOLGA8CPA6NN73 597 aa9.9□□□□□ -0.82
PMS2-205ENST00000415839 NBPF3Q9H094 633 aa9.89□□□□□ -0.83
PMS2-205ENST00000415839 PPP1R3GB7ZBB8 358 aa9.87□□□□□ -0.83
PMS2-205ENST00000415839 PHF14O94880 888 aa9.87□□□□□ -0.83
PMS2-205ENST00000415839 TYW1BQ6NUM6 668 aa9.87□□□□□ -0.83
PMS2-205ENST00000415839 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
PMS2-205ENST00000415839 FBXW7Q969H0 707 aa9.87□□□□□ -0.83
PMS2-205ENST00000415839 CAMK2BQ13554 666 aa9.86□□□□□ -0.83
PMS2-205ENST00000415839 KCNC4Q03721 635 aa9.85□□□□□ -0.83
PMS2-205ENST00000415839 COL9A1P20849 921 aa9.84□□□□□ -0.83
PMS2-205ENST00000415839 PROX2Q3B8N5 592 aa9.83□□□□□ -0.84
PMS2-205ENST00000415839 BBXQ8WY36 941 aaPredicted RBP9.83□□□□□ -0.84
PMS2-205ENST00000415839 STK17AQ9UEE5 414 aa9.83□□□□□ -0.84
PMS2-205ENST00000415839 RABGEF1Q9UJ41 708 aa9.83□□□□□ -0.84
PMS2-205ENST00000415839 DPYSL4O14531 572 aa9.82□□□□□ -0.84
PMS2-205ENST00000415839 EPAS1Q99814 870 aa9.81□□□□□ -0.84
PMS2-205ENST00000415839 PRKD2Q9BZL6 878 aa9.79□□□□□ -0.84
PMS2-205ENST00000415839 POTECB2RU33 542 aa9.78□□□□□ -0.84
PMS2-205ENST00000415839 C6orf132Q5T0Z8 1188 aa9.78□□□□□ -0.84
PMS2-205ENST00000415839 ANKK1Q8NFD2 765 aa9.78□□□□□ -0.84
PMS2-205ENST00000415839 LAPTM4BQ86VI4 370 aa9.77□□□□□ -0.85
PMS2-205ENST00000415839 ONECUT3O60422 494 aaPredicted RBP9.76□□□□□ -0.85
PMS2-205ENST00000415839 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
PMS2-205ENST00000415839 KIAA1468Q9P260 1216 aa9.76□□□□□ -0.85
PMS2-205ENST00000415839 DDX12PQ92771 950 aa9.75□□□□□ -0.85
PMS2-205ENST00000415839 RBM33Q96EV2 1170 aaKnown RBP9.74□□□□□ -0.85
PMS2-205ENST00000415839 SPRYD3Q8NCJ5 442 aa9.73□□□□□ -0.85
PMS2-205ENST00000415839 PDZRN3Q9UPQ7 1066 aa9.73□□□□□ -0.85
PMS2-205ENST00000415839 SOWAHBA6NEL2 793 aa9.72□□□□□ -0.85
PMS2-205ENST00000415839 TRIM6-TRIM34B2RNG4 842 aa9.72□□□□□ -0.85
PMS2-205ENST00000415839 BCAMP50895 628 aa9.72□□□□□ -0.85
PMS2-205ENST00000415839 NYAP1Q6ZVC0 841 aa9.72□□□□□ -0.85
PMS2-205ENST00000415839 ZFRQ96KR1 1074 aaKnown RBP9.72□□□□□ -0.85
PMS2-205ENST00000415839 SEPT9Q9UHD8 586 aaPredicted RBP9.71□□□□□ -0.86
PMS2-205ENST00000415839 V9GY48 417 aaPredicted RBP9.71□□□□□ -0.86
PMS2-205ENST00000415839 PDIA6Q15084 440 aa9.7□□□□□ -0.86
PMS2-205ENST00000415839 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.7□□□□□ -0.86
PMS2-205ENST00000415839 SPDYE16A6NNV3 312 aaPredicted RBP9.69□□□□□ -0.86
PMS2-205ENST00000415839 EN1Q05925 392 aaPredicted RBP9.69□□□□□ -0.86
PMS2-205ENST00000415839 NBR1Q14596 966 aa9.69□□□□□ -0.86
PMS2-205ENST00000415839 SUZ12Q15022 739 aaKnown RBP9.69□□□□□ -0.86
PMS2-205ENST00000415839 FAM98CQ17RN3 349 aaKnown RBP9.68□□□□□ -0.86
PMS2-205ENST00000415839 MAP3K7O43318 606 aa9.67□□□□□ -0.86
PMS2-205ENST00000415839 TSR1Q2NL82 804 aaKnown RBP9.66□□□□□ -0.86
PMS2-205ENST00000415839 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
PMS2-205ENST00000415839 E2F4Q16254 413 aa9.65□□□□□ -0.86
PMS2-205ENST00000415839 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.64□□□□□ -0.87
PMS2-205ENST00000415839 PACS2Q86VP3 889 aa9.63□□□□□ -0.87
PMS2-205ENST00000415839 TSKSQ9UJT2 592 aa9.63□□□□□ -0.87
PMS2-205ENST00000415839 ARIH1Q9Y4X5 557 aaPredicted RBP9.63□□□□□ -0.87
PMS2-205ENST00000415839 LRCH3Q96II8 777 aa9.62□□□□□ -0.87
PMS2-205ENST00000415839 CFAP44Q96MT7 982 aa9.62□□□□□ -0.87
PMS2-205ENST00000415839 WDR70Q9NW82 654 aa9.62□□□□□ -0.87
PMS2-205ENST00000415839 TSR3Q9UJK0 312 aaKnown RBP9.62□□□□□ -0.87
PMS2-205ENST00000415839 MYT1Q01538 1121 aa9.61□□□□□ -0.87
PMS2-205ENST00000415839 PAXIP1Q6ZW49 1069 aaPredicted RBP9.61□□□□□ -0.87
PMS2-205ENST00000415839 HPS5Q9UPZ3 1129 aa9.61□□□□□ -0.87
PMS2-205ENST00000415839 WIPF1O43516 503 aa9.6□□□□□ -0.87
PMS2-205ENST00000415839 RTN4Q9NQC3 1192 aaKnown RBP9.6□□□□□ -0.87
PMS2-205ENST00000415839 CERKQ8TCT0 537 aa9.59□□□□□ -0.87
PMS2-205ENST00000415839 CDCA7LQ96GN5 454 aa9.59□□□□□ -0.87
PMS2-205ENST00000415839 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
PMS2-205ENST00000415839 PRIM1P49642 420 aaKnown RBP9.58□□□□□ -0.88
PMS2-205ENST00000415839 PRSS12P56730 875 aa9.58□□□□□ -0.88
PMS2-205ENST00000415839 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
PMS2-205ENST00000415839 WFS1O76024 890 aa9.56□□□□□ -0.88
PMS2-205ENST00000415839 FAM198AQ9UFP1 575 aa9.56□□□□□ -0.88
PMS2-205ENST00000415839 SMAPO00193 183 aa9.55□□□□□ -0.88
PMS2-205ENST00000415839 PPP4CP60510 307 aa9.55□□□□□ -0.88
PMS2-205ENST00000415839 OSBPP22059 807 aa9.54□□□□□ -0.88
PMS2-205ENST00000415839 NBPF26B4DH59 902 aa9.53□□□□□ -0.88
PMS2-205ENST00000415839 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
PMS2-205ENST00000415839 SAMD7Q7Z3H4 446 aa9.53□□□□□ -0.88
PMS2-205ENST00000415839 TATDN2Q93075 761 aa9.53□□□□□ -0.88
PMS2-205ENST00000415839 C3orf80F5H4A9 247 aa9.52□□□□□ -0.89
PMS2-205ENST00000415839 CDHR5Q9HBB8 845 aa9.52□□□□□ -0.89
PMS2-205ENST00000415839 PNMA3Q9UL41 463 aa9.52□□□□□ -0.89
PMS2-205ENST00000415839 TRIM67Q6ZTA4 783 aa9.5□□□□□ -0.89
PMS2-205ENST00000415839 RBM27Q9P2N5 1060 aaKnown RBP9.5□□□□□ -0.89
PMS2-205ENST00000415839 PKDCCQ504Y2 493 aa9.49□□□□□ -0.89
PMS2-205ENST00000415839 DGAT1O75907 488 aa9.48□□□□□ -0.89
PMS2-205ENST00000415839 NUDT18Q6ZVK8 323 aa9.48□□□□□ -0.89
PMS2-205ENST00000415839 NFX1Q12986 1120 aaKnown RBP9.47□□□□□ -0.89
PMS2-205ENST00000415839 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
PMS2-205ENST00000415839 HDGFP51858 240 aaKnown RBP9.46□□□□□ -0.9
PMS2-205ENST00000415839 TTC13Q8NBP0 860 aa9.44□□□□□ -0.9
PMS2-205ENST00000415839 MTRQ99707 1265 aa9.44□□□□□ -0.9
PMS2-205ENST00000415839 NPDC1Q9NQX5 325 aaPredicted RBP9.44□□□□□ -0.9
PMS2-205ENST00000415839 RNF40O75150 1001 aa9.43□□□□□ -0.9
PMS2-205ENST00000415839 IL21Q9HBE4 155 aa9.43□□□□□ -0.9
PMS2-205ENST00000415839 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.43□□□□□ -0.9
PMS2-205ENST00000415839 PADI6Q6TGC4 694 aa9.42□□□□□ -0.9
PMS2-205ENST00000415839 APLP1P51693 650 aa9.4□□□□□ -0.9
PMS2-205ENST00000415839 LCE2CQ5TA81 110 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms