RNA–Protein interactions for RNA: ENST00000415839.2

PMS2-205, Transcript of PMS1 homolog 2, mismatch repair system component, humanhuman

TSL 5

Gene PMS2, Length 924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2-205ENST00000415839 AEBP2Q6ZN18 517 aaPredicted RBP26.57■■□□□ 1.84
PMS2-205ENST00000415839 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
PMS2-205ENST00000415839 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
PMS2-205ENST00000415839 POTEDQ86YR6 584 aa22.47■■□□□ 1.19
PMS2-205ENST00000415839 PHF23Q9BUL5 403 aaPredicted RBP22.33■■□□□ 1.17
PMS2-205ENST00000415839 FOXD1Q16676 465 aa21.47■■□□□ 1.03
PMS2-205ENST00000415839 MSH5O43196 834 aa20.56■□□□□ 0.88
PMS2-205ENST00000415839 PIAS4Q8N2W9 510 aaPredicted RBP19.67■□□□□ 0.74
PMS2-205ENST00000415839 PPP6R1Q9UPN7 881 aa19.05■□□□□ 0.64
PMS2-205ENST00000415839 ADRA2BP18089 450 aa18.86■□□□□ 0.61
PMS2-205ENST00000415839 CACNB1Q02641 598 aaPredicted RBP18.46■□□□□ 0.55
PMS2-205ENST00000415839 PLPPR3Q6T4P5 718 aa18.39■□□□□ 0.53
PMS2-205ENST00000415839 DMRT2Q9Y5R5 561 aa17.9■□□□□ 0.46
PMS2-205ENST00000415839 MAPK8IP2Q13387 824 aaPredicted RBP17.76■□□□□ 0.43
PMS2-205ENST00000415839 RNF39Q9H2S5 420 aa17.47■□□□□ 0.39
PMS2-205ENST00000415839 POTEHQ6S545 545 aa17.31■□□□□ 0.36
PMS2-205ENST00000415839 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
PMS2-205ENST00000415839 DCAF8L1A6NGE4 600 aa17.13■□□□□ 0.33
PMS2-205ENST00000415839 C1QBPQ07021 282 aaKnown RBP17.1■□□□□ 0.33
PMS2-205ENST00000415839 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
PMS2-205ENST00000415839 DNAJC5BQ9UF47 199 aa16.41■□□□□ 0.22
PMS2-205ENST00000415839 RNF216Q9NWF9 866 aaPredicted RBP16.18■□□□□ 0.18
PMS2-205ENST00000415839 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
PMS2-205ENST00000415839 CNKSR2Q8WXI2 1034 aa15.96■□□□□ 0.15
PMS2-205ENST00000415839 DSG3P32926 999 aa15.89■□□□□ 0.13
PMS2-205ENST00000415839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.83■□□□□ 0.12
PMS2-205ENST00000415839 SPINK5Q9NQ38 1064 aaPredicted RBP15.61■□□□□ 0.09
PMS2-205ENST00000415839 CAPN15O75808 1086 aa15.58■□□□□ 0.08
PMS2-205ENST00000415839 SP7Q8TDD2 431 aaPredicted RBP15.57■□□□□ 0.08
PMS2-205ENST00000415839 NCBP3Q53F19 620 aaKnown RBP15.5■□□□□ 0.07
PMS2-205ENST00000415839 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
PMS2-205ENST00000415839 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
PMS2-205ENST00000415839 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
PMS2-205ENST00000415839 ABCB7O75027 752 aa15.13■□□□□ 0.01
PMS2-205ENST00000415839 RBM42Q9BTD8 480 aaKnown RBP15.11■□□□□ 0.01
PMS2-205ENST00000415839 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
PMS2-205ENST00000415839 KCNA4P22459 653 aa14.96□□□□□ -0.01
PMS2-205ENST00000415839 ZNF219Q9P2Y4 722 aaPredicted RBP14.91□□□□□ -0.02
PMS2-205ENST00000415839 HAX1O00165 279 aa14.78□□□□□ -0.04
PMS2-205ENST00000415839 PLSCR2Q9NRY7 297 aa14.76□□□□□ -0.05
PMS2-205ENST00000415839 PIP4P2Q8N4L2 257 aa14.74□□□□□ -0.05
PMS2-205ENST00000415839 APLP2Q06481 763 aa14.72□□□□□ -0.05
PMS2-205ENST00000415839 EVX2Q03828 476 aa14.61□□□□□ -0.07
PMS2-205ENST00000415839 LHX8Q68G74 356 aa14.58□□□□□ -0.08
PMS2-205ENST00000415839 SLC4A2P04920 1241 aa14.57□□□□□ -0.08
PMS2-205ENST00000415839 AKT1S1Q96B36 256 aa14.51□□□□□ -0.09
PMS2-205ENST00000415839 FXR2P51116 673 aaKnown RBP eCLIP14.44□□□□□ -0.1
PMS2-205ENST00000415839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.41□□□□□ -0.1
PMS2-205ENST00000415839 HNRNPUL2Q1KMD3 747 aaKnown RBP14.41□□□□□ -0.1
PMS2-205ENST00000415839 REM2Q8IYK8 340 aaPredicted RBP14.4□□□□□ -0.1
PMS2-205ENST00000415839 POLA2Q14181 598 aa14.32□□□□□ -0.12
PMS2-205ENST00000415839 SAMD1Q6SPF0 538 aaPredicted RBP14.29□□□□□ -0.12
PMS2-205ENST00000415839 PITPNM1O00562 1244 aa14.28□□□□□ -0.12
PMS2-205ENST00000415839 GABBR2O75899 941 aa14.15□□□□□ -0.14
PMS2-205ENST00000415839 SLC4A1APQ9BWU0 796 aaKnown RBP14.13□□□□□ -0.15
PMS2-205ENST00000415839 MYCNP04198 464 aaPredicted RBP14.12□□□□□ -0.15
PMS2-205ENST00000415839 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
PMS2-205ENST00000415839 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
PMS2-205ENST00000415839 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
PMS2-205ENST00000415839 POTEIP0CG38 1075 aa13.89□□□□□ -0.19
PMS2-205ENST00000415839 ZBTB12Q9Y330 459 aaPredicted RBP13.87□□□□□ -0.19
PMS2-205ENST00000415839 PRKAR2AP13861 404 aaKnown RBP13.86□□□□□ -0.19
PMS2-205ENST00000415839 POTEMA6NI47 508 aa13.8□□□□□ -0.2
PMS2-205ENST00000415839 ATF5Q9Y2D1 282 aaPredicted RBP13.78□□□□□ -0.2
PMS2-205ENST00000415839 ZBTB22O15209 634 aa13.74□□□□□ -0.21
PMS2-205ENST00000415839 POTEGQ6S5H5 508 aa13.71□□□□□ -0.21
PMS2-205ENST00000415839 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
PMS2-205ENST00000415839 OTUD5Q96G74 571 aa13.62□□□□□ -0.23
PMS2-205ENST00000415839 ATXN8OSP0DMR3 200 aa13.55□□□□□ -0.24
PMS2-205ENST00000415839 CLEC11AQ9Y240 323 aa13.48□□□□□ -0.25
PMS2-205ENST00000415839 SPDYE1Q8NFV5 336 aaPredicted RBP13.45□□□□□ -0.26
PMS2-205ENST00000415839 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
PMS2-205ENST00000415839 POTEB2H3BUK9 544 aa13.41□□□□□ -0.26
PMS2-205ENST00000415839 CLCN6P51797 869 aa13.4□□□□□ -0.26
PMS2-205ENST00000415839 DCBLD2Q96PD2 775 aa13.4□□□□□ -0.26
PMS2-205ENST00000415839 SPDYE2BA6NHP3 402 aa13.36□□□□□ -0.27
PMS2-205ENST00000415839 SPDYE6P0CI01 402 aa13.36□□□□□ -0.27
PMS2-205ENST00000415839 SPDYE2Q495Y8 402 aa13.36□□□□□ -0.27
PMS2-205ENST00000415839 CD44P16070 742 aaKnown RBP13.32□□□□□ -0.28
PMS2-205ENST00000415839 FBLN2P98095 1184 aa13.26□□□□□ -0.29
PMS2-205ENST00000415839 LCE2DQ5TA82 110 aaPredicted RBP13.23□□□□□ -0.29
PMS2-205ENST00000415839 MKRN4PQ13434 485 aaPredicted RBP13.15□□□□□ -0.3
PMS2-205ENST00000415839 CSRNP3Q8WYN3 585 aa13.12□□□□□ -0.31
PMS2-205ENST00000415839 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
PMS2-205ENST00000415839 SSUH2Q9Y2M2 353 aa13.08□□□□□ -0.32
PMS2-205ENST00000415839 FARP1Q9Y4F1 1045 aaPredicted RBP13.08□□□□□ -0.32
PMS2-205ENST00000415839 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
PMS2-205ENST00000415839 GALR2O43603 387 aaPredicted RBP13.03□□□□□ -0.32
PMS2-205ENST00000415839 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.33
PMS2-205ENST00000415839 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
PMS2-205ENST00000415839 POTEJP0CG39 1038 aa13□□□□□ -0.33
PMS2-205ENST00000415839 PELP1Q8IZL8 1130 aaKnown RBP12.95□□□□□ -0.34
PMS2-205ENST00000415839 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
PMS2-205ENST00000415839 ZRANB1Q9UGI0 708 aa12.92□□□□□ -0.34
PMS2-205ENST00000415839 CDAN1Q8IWY9 1227 aa12.91□□□□□ -0.34
PMS2-205ENST00000415839 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
PMS2-205ENST00000415839 PABPN1Q86U42 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
PMS2-205ENST00000415839 METRNQ9UJH8 293 aa12.8□□□□□ -0.36
PMS2-205ENST00000415839 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
PMS2-205ENST00000415839 C7P10643 843 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms