RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 GBP4Q96PP9 640 aa23.01■■□□□ 1.27
SHANK3-202ENST00000414786 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
SHANK3-202ENST00000414786 IPO8O15397 1037 aaKnown RBP23■■□□□ 1.27
SHANK3-202ENST00000414786 APPP05067 770 aa23■■□□□ 1.27
SHANK3-202ENST00000414786 DCAF8L1A6NGE4 600 aa22.99■■□□□ 1.27
SHANK3-202ENST00000414786 VPS37DQ86XT2 251 aa22.99■■□□□ 1.27
SHANK3-202ENST00000414786 CCDC34Q96HJ3 373 aa22.99■■□□□ 1.27
SHANK3-202ENST00000414786 RSF1Q96T23 1441 aaPredicted RBP22.98■■□□□ 1.27
SHANK3-202ENST00000414786 NOL10Q9BSC4 688 aaKnown RBP22.98■■□□□ 1.27
SHANK3-202ENST00000414786 ZNF592Q92610 1267 aa22.97■■□□□ 1.27
SHANK3-202ENST00000414786 TSR1Q2NL82 804 aaKnown RBP22.97■■□□□ 1.27
SHANK3-202ENST00000414786 CCDC43Q96MW1 224 aaKnown RBP22.96■■□□□ 1.27
SHANK3-202ENST00000414786 EIF2S2P20042 333 aaKnown RBP22.96■■□□□ 1.27
SHANK3-202ENST00000414786 RRP7AQ9Y3A4 280 aaKnown RBP22.96■■□□□ 1.27
SHANK3-202ENST00000414786 CLIP1P30622 1438 aa22.96■■□□□ 1.27
SHANK3-202ENST00000414786 PTMSP20962 102 aa22.96■■□□□ 1.27
SHANK3-202ENST00000414786 ZFYVE27Q5T4F4 411 aa22.95■■□□□ 1.26
SHANK3-202ENST00000414786 KIF16BQ96L93 1317 aa22.94■■□□□ 1.26
SHANK3-202ENST00000414786 FAM184AQ8NB25 1140 aa22.94■■□□□ 1.26
SHANK3-202ENST00000414786 SKIDA1Q1XH10 827 aa22.94■■□□□ 1.26
SHANK3-202ENST00000414786 SYAP1Q96A49 352 aaPredicted RBP22.92■■□□□ 1.26
SHANK3-202ENST00000414786 FAM177BA6PVY3 158 aa22.91■■□□□ 1.26
SHANK3-202ENST00000414786 TMEM132AQ24JP5 1023 aa22.91■■□□□ 1.26
SHANK3-202ENST00000414786 ZNF428Q96B54 188 aa22.91■■□□□ 1.26
SHANK3-202ENST00000414786 EID1Q9Y6B2 187 aa22.9■■□□□ 1.26
SHANK3-202ENST00000414786 NAP1L1P55209 391 aaKnown RBP22.89■■□□□ 1.25
SHANK3-202ENST00000414786 TPM2P07951 284 aa22.88■■□□□ 1.25
SHANK3-202ENST00000414786 AMOTL1Q8IY63 956 aa22.88■■□□□ 1.25
SHANK3-202ENST00000414786 CALD1Q05682 793 aaKnown RBP22.88■■□□□ 1.25
SHANK3-202ENST00000414786 BCL2L13Q9BXK5 485 aa22.87■■□□□ 1.25
SHANK3-202ENST00000414786 RWDD1Q9H446 243 aaPredicted RBP22.87■■□□□ 1.25
SHANK3-202ENST00000414786 C1orf141Q5JVX7 400 aa22.85■■□□□ 1.25
SHANK3-202ENST00000414786 PLIN1O60240 522 aa22.85■■□□□ 1.25
SHANK3-202ENST00000414786 TCERG1O14776 1098 aaKnown RBP22.85■■□□□ 1.25
SHANK3-202ENST00000414786 IKQ13123 557 aaPredicted RBP22.85■■□□□ 1.25
SHANK3-202ENST00000414786 SYNE3Q6ZMZ3 975 aa22.85■■□□□ 1.25
SHANK3-202ENST00000414786 DHX37Q8IY37 1157 aaKnown RBP22.85■■□□□ 1.25
SHANK3-202ENST00000414786 CT47A1Q5JQC4 288 aaPredicted RBP22.85■■□□□ 1.25
SHANK3-202ENST00000414786 CCAR1Q8IX12 1150 aaKnown RBP22.84■■□□□ 1.25
SHANK3-202ENST00000414786 SETQ01105 290 aaPredicted RBP22.84■■□□□ 1.25
SHANK3-202ENST00000414786 CCNB3Q8WWL7 1395 aa22.84■■□□□ 1.25
SHANK3-202ENST00000414786 ODF2Q5BJF6 829 aa22.84■■□□□ 1.25
SHANK3-202ENST00000414786 CCDC27Q2M243 656 aa22.83■■□□□ 1.24
SHANK3-202ENST00000414786 PPM1FP49593 454 aaPredicted RBP22.81■■□□□ 1.24
SHANK3-202ENST00000414786 NFXL1Q6ZNB6 911 aa22.81■■□□□ 1.24
SHANK3-202ENST00000414786 RRP12Q5JTH9 1297 aaKnown RBP22.81■■□□□ 1.24
SHANK3-202ENST00000414786 WDR70Q9NW82 654 aa22.81■■□□□ 1.24
SHANK3-202ENST00000414786 HMMRO75330 724 aa22.8■■□□□ 1.24
SHANK3-202ENST00000414786 RBM33Q96EV2 1170 aaKnown RBP22.79■■□□□ 1.24
SHANK3-202ENST00000414786 GOLGA6L19H0YKK7 550 aa22.79■■□□□ 1.24
SHANK3-202ENST00000414786 R3HCC1Q9Y3T6 440 aaKnown RBP22.79■■□□□ 1.24
SHANK3-202ENST00000414786 GOLGA6L3A6NEY3 463 aa22.79■■□□□ 1.24
SHANK3-202ENST00000414786 USP35Q9P2H5 1018 aa22.79■■□□□ 1.24
SHANK3-202ENST00000414786 ROCK2O75116 1388 aaKnown RBP22.77■■□□□ 1.24
SHANK3-202ENST00000414786 CSPP1Q1MSJ5 1256 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 BECN2A8MW95 431 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 TTC5Q8N0Z6 440 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 PKD2Q13563 968 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 TRAK1Q9UPV9 953 aa22.77■■□□□ 1.24
SHANK3-202ENST00000414786 STK11IPQ8N1F8 1099 aa22.77■■□□□ 1.23
SHANK3-202ENST00000414786 TTLL5Q6EMB2 1281 aa22.76■■□□□ 1.23
SHANK3-202ENST00000414786 RCAN3Q9UKA8 241 aa22.76■■□□□ 1.23
SHANK3-202ENST00000414786 TRIM29Q14134 588 aa22.76■■□□□ 1.23
SHANK3-202ENST00000414786 HSPA5P11021 654 aaKnown RBP22.75■■□□□ 1.23
SHANK3-202ENST00000414786 KTN1Q86UP2 1357 aaKnown RBP22.75■■□□□ 1.23
SHANK3-202ENST00000414786 ANKRD45Q5TZF3 282 aa22.74■■□□□ 1.23
SHANK3-202ENST00000414786 TPM1P09493 284 aa22.74■■□□□ 1.23
SHANK3-202ENST00000414786 HSP90AB2PQ58FF8 381 aa22.73■■□□□ 1.23
SHANK3-202ENST00000414786 KIF3BO15066 747 aa22.73■■□□□ 1.23
SHANK3-202ENST00000414786 ANO2Q9NQ90 1003 aa22.72■■□□□ 1.23
SHANK3-202ENST00000414786 NUTM2GQ5VZR2 741 aa22.72■■□□□ 1.23
SHANK3-202ENST00000414786 C9orf78Q9NZ63 289 aaPredicted RBP22.71■■□□□ 1.23
SHANK3-202ENST00000414786 CHMP4CQ96CF2 233 aa22.7■■□□□ 1.22
SHANK3-202ENST00000414786 CALRP27797 417 aaKnown RBP22.69■■□□□ 1.22
SHANK3-202ENST00000414786 AIMP1Q12904 312 aaKnown RBP22.69■■□□□ 1.22
SHANK3-202ENST00000414786 CCDC70Q6NSX1 233 aa22.69■■□□□ 1.22
SHANK3-202ENST00000414786 ST18O60284 1047 aa22.68■■□□□ 1.22
SHANK3-202ENST00000414786 TEFQ10587 303 aa22.68■■□□□ 1.22
SHANK3-202ENST00000414786 PMFBP1Q8TBY8 1022 aa22.67■■□□□ 1.22
SHANK3-202ENST00000414786 CCDC97Q96F63 343 aaPredicted RBP22.67■■□□□ 1.22
SHANK3-202ENST00000414786 CHMP4BP1P59074 171 aa22.67■■□□□ 1.22
SHANK3-202ENST00000414786 ATP2B2Q01814 1243 aa22.67■■□□□ 1.22
SHANK3-202ENST00000414786 EPS15P42566 896 aa22.66■■□□□ 1.22
SHANK3-202ENST00000414786 CPLX1O14810 134 aa22.66■■□□□ 1.22
SHANK3-202ENST00000414786 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.66■■□□□ 1.22
SHANK3-202ENST00000414786 DCAF1Q9Y4B6 1507 aa22.66■■□□□ 1.22
SHANK3-202ENST00000414786 DIAPH3Q9NSV4 1193 aa22.66■■□□□ 1.22
SHANK3-202ENST00000414786 HOMER1Q86YM7 354 aa22.65■■□□□ 1.22
SHANK3-202ENST00000414786 ZNF771Q7L3S4 317 aaPredicted RBP22.65■■□□□ 1.22
SHANK3-202ENST00000414786 TERF2IPQ9NYB0 399 aa22.64■■□□□ 1.22
SHANK3-202ENST00000414786 WASHC2CQ9Y4E1 1318 aa22.64■■□□□ 1.22
SHANK3-202ENST00000414786 KIF3AQ9Y496 699 aa22.64■■□□□ 1.21
SHANK3-202ENST00000414786 PLCD4Q9BRC7 762 aa22.63■■□□□ 1.21
SHANK3-202ENST00000414786 RBM19Q9Y4C8 960 aaKnown RBP22.63■■□□□ 1.21
SHANK3-202ENST00000414786 ERICH2A1L162 156 aa22.63■■□□□ 1.21
SHANK3-202ENST00000414786 PSME1Q06323 249 aa22.63■■□□□ 1.21
SHANK3-202ENST00000414786 NEUROD6Q96NK8 337 aa22.62■■□□□ 1.21
SHANK3-202ENST00000414786 AK7Q96M32 723 aa22.62■■□□□ 1.21
SHANK3-202ENST00000414786 IPO7O95373 1038 aaKnown RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms