RNA–Protein interactions for RNA: ENST00000413879.1

AC004987.3-201, humanhuman

BASIC

Gene AC004987.3, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.3-201ENST00000413879 PCDHGA10Q9Y5H3 936 aa9.23□□□□□ -0.93
AC004987.3-201ENST00000413879 COL9A1P20849 921 aa9.22□□□□□ -0.93
AC004987.3-201ENST00000413879 KCNC4Q03721 635 aa9.22□□□□□ -0.93
AC004987.3-201ENST00000413879 LAPTM4BQ86VI4 370 aa9.22□□□□□ -0.93
AC004987.3-201ENST00000413879 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
AC004987.3-201ENST00000413879 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
AC004987.3-201ENST00000413879 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
AC004987.3-201ENST00000413879 ZFRQ96KR1 1074 aaKnown RBP9.21□□□□□ -0.94
AC004987.3-201ENST00000413879 TYW1BQ6NUM6 668 aa9.2□□□□□ -0.94
AC004987.3-201ENST00000413879 FBXW7Q969H0 707 aa9.2□□□□□ -0.94
AC004987.3-201ENST00000413879 WBP1LQ9NX94 342 aa9.19□□□□□ -0.94
AC004987.3-201ENST00000413879 PHF14O94880 888 aa9.18□□□□□ -0.94
AC004987.3-201ENST00000413879 EMILIN3Q9NT22 766 aa9.18□□□□□ -0.94
AC004987.3-201ENST00000413879 GTPBP6O43824 516 aaPredicted RBP9.16□□□□□ -0.94
AC004987.3-201ENST00000413879 SEPT9Q9UHD8 586 aaPredicted RBP9.16□□□□□ -0.94
AC004987.3-201ENST00000413879 ONECUT3O60422 494 aaPredicted RBP9.15□□□□□ -0.94
AC004987.3-201ENST00000413879 MFSD10Q14728 455 aa9.15□□□□□ -0.94
AC004987.3-201ENST00000413879 C6orf132Q5T0Z8 1188 aa9.14□□□□□ -0.95
AC004987.3-201ENST00000413879 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.13□□□□□ -0.95
AC004987.3-201ENST00000413879 TSR3Q9UJK0 312 aaKnown RBP9.13□□□□□ -0.95
AC004987.3-201ENST00000413879 LAPTM4AQ15012 233 aa9.12□□□□□ -0.95
AC004987.3-201ENST00000413879 LRCH3Q96II8 777 aa9.12□□□□□ -0.95
AC004987.3-201ENST00000413879 EPAS1Q99814 870 aa9.12□□□□□ -0.95
AC004987.3-201ENST00000413879 HPS5Q9UPZ3 1129 aa9.12□□□□□ -0.95
AC004987.3-201ENST00000413879 GFRA3O60609 400 aa9.11□□□□□ -0.95
AC004987.3-201ENST00000413879 FAM98CQ17RN3 349 aaKnown RBP9.11□□□□□ -0.95
AC004987.3-201ENST00000413879 RBM33Q96EV2 1170 aaKnown RBP9.11□□□□□ -0.95
AC004987.3-201ENST00000413879 TRIM6-TRIM34B2RNG4 842 aa9.1□□□□□ -0.95
AC004987.3-201ENST00000413879 TRAF7Q6Q0C0 670 aa9.09□□□□□ -0.95
AC004987.3-201ENST00000413879 PPP4CP60510 307 aa9.08□□□□□ -0.96
AC004987.3-201ENST00000413879 DCAF8L2P0C7V8 631 aa9.07□□□□□ -0.96
AC004987.3-201ENST00000413879 PACS2Q86VP3 889 aa9.06□□□□□ -0.96
AC004987.3-201ENST00000413879 DPYSL4O14531 572 aa9.05□□□□□ -0.96
AC004987.3-201ENST00000413879 DDX12PQ92771 950 aa9.05□□□□□ -0.96
AC004987.3-201ENST00000413879 CADPS2Q86UW7 1296 aa9.03□□□□□ -0.96
AC004987.3-201ENST00000413879 PRKD2Q9BZL6 878 aa9.02□□□□□ -0.97
AC004987.3-201ENST00000413879 MAP3K7O43318 606 aa9□□□□□ -0.97
AC004987.3-201ENST00000413879 CAMK2BQ13554 666 aa8.99□□□□□ -0.97
AC004987.3-201ENST00000413879 TSKSQ9UJT2 592 aa8.99□□□□□ -0.97
AC004987.3-201ENST00000413879 NBR1Q14596 966 aa8.98□□□□□ -0.97
AC004987.3-201ENST00000413879 TJAP1Q5JTD0 557 aa8.98□□□□□ -0.97
AC004987.3-201ENST00000413879 SAMD7Q7Z3H4 446 aa8.98□□□□□ -0.97
AC004987.3-201ENST00000413879 SMAPO00193 183 aa8.97□□□□□ -0.97
AC004987.3-201ENST00000413879 NRG2O14511 850 aaPredicted RBP8.97□□□□□ -0.97
AC004987.3-201ENST00000413879 LCE2BO14633 110 aa8.97□□□□□ -0.97
AC004987.3-201ENST00000413879 HDGFP51858 240 aaKnown RBP8.97□□□□□ -0.97
AC004987.3-201ENST00000413879 TSR1Q2NL82 804 aaKnown RBP8.97□□□□□ -0.97
AC004987.3-201ENST00000413879 PPP1R18Q6NYC8 613 aa8.97□□□□□ -0.97
AC004987.3-201ENST00000413879 EN1Q05925 392 aaPredicted RBP8.96□□□□□ -0.98
AC004987.3-201ENST00000413879 IL21Q9HBE4 155 aa8.96□□□□□ -0.98
AC004987.3-201ENST00000413879 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
AC004987.3-201ENST00000413879 MTRQ99707 1265 aa8.95□□□□□ -0.98
AC004987.3-201ENST00000413879 ZNF787Q6DD87 383 aa8.94□□□□□ -0.98
AC004987.3-201ENST00000413879 V9GY48 417 aaPredicted RBP8.94□□□□□ -0.98
AC004987.3-201ENST00000413879 RNF40O75150 1001 aa8.93□□□□□ -0.98
AC004987.3-201ENST00000413879 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.93□□□□□ -0.98
AC004987.3-201ENST00000413879 PRSS12P56730 875 aa8.92□□□□□ -0.98
AC004987.3-201ENST00000413879 PNMA3Q9UL41 463 aa8.92□□□□□ -0.98
AC004987.3-201ENST00000413879 ZNF516Q92618 1163 aa8.91□□□□□ -0.98
AC004987.3-201ENST00000413879 TATDN2Q93075 761 aa8.91□□□□□ -0.98
AC004987.3-201ENST00000413879 PDZRN3Q9UPQ7 1066 aa8.91□□□□□ -0.98
AC004987.3-201ENST00000413879 CERKQ8TCT0 537 aa8.9□□□□□ -0.98
AC004987.3-201ENST00000413879 NBPF26B4DH59 902 aa8.89□□□□□ -0.99
AC004987.3-201ENST00000413879 SPDYE16A6NNV3 312 aaPredicted RBP8.88□□□□□ -0.99
AC004987.3-201ENST00000413879 GGCXP38435 758 aa8.88□□□□□ -0.99
AC004987.3-201ENST00000413879 GRXCR2A6NFK2 248 aa8.87□□□□□ -0.99
AC004987.3-201ENST00000413879 FAM198AQ9UFP1 575 aa8.87□□□□□ -0.99
AC004987.3-201ENST00000413879 PDIA6Q15084 440 aa8.86□□□□□ -0.99
AC004987.3-201ENST00000413879 NUDT18Q6ZVK8 323 aa8.86□□□□□ -0.99
AC004987.3-201ENST00000413879 NKX2-3Q8TAU0 364 aa8.86□□□□□ -0.99
AC004987.3-201ENST00000413879 APLP1P51693 650 aa8.85□□□□□ -0.99
AC004987.3-201ENST00000413879 C3orf80F5H4A9 247 aa8.84□□□□□ -0.99
AC004987.3-201ENST00000413879 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
AC004987.3-201ENST00000413879 COPS2P61201 443 aa8.83□□□□□ -1
AC004987.3-201ENST00000413879 ZNF775Q96BV0 537 aaPredicted RBP8.82□□□□□ -1
AC004987.3-201ENST00000413879 SLC4A3P48751 1232 aa8.81□□□□□ -1
AC004987.3-201ENST00000413879 TMUB1Q9BVT8 246 aa8.8□□□□□ -1
AC004987.3-201ENST00000413879 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
AC004987.3-201ENST00000413879 SWT1Q5T5J6 900 aaKnown RBP8.79□□□□□ -1
AC004987.3-201ENST00000413879 SLF2Q8IX21 1173 aa8.79□□□□□ -1
AC004987.3-201ENST00000413879 E2F4Q16254 413 aa8.78□□□□□ -1
AC004987.3-201ENST00000413879 ZPR1O75312 459 aa8.77□□□□□ -1.01
AC004987.3-201ENST00000413879 WDR70Q9NW82 654 aa8.77□□□□□ -1.01
AC004987.3-201ENST00000413879 SLC19A1P41440 591 aa8.76□□□□□ -1.01
AC004987.3-201ENST00000413879 CDHR5Q9HBB8 845 aa8.76□□□□□ -1.01
AC004987.3-201ENST00000413879 OSBPP22059 807 aa8.75□□□□□ -1.01
AC004987.3-201ENST00000413879 PKDCCQ504Y2 493 aa8.75□□□□□ -1.01
AC004987.3-201ENST00000413879 RBM27Q9P2N5 1060 aaKnown RBP8.75□□□□□ -1.01
AC004987.3-201ENST00000413879 BBXQ8WY36 941 aaPredicted RBP8.73□□□□□ -1.01
AC004987.3-201ENST00000413879 PRR14Q9BWN1 585 aa8.73□□□□□ -1.01
AC004987.3-201ENST00000413879 PCDHB3Q9Y5E6 796 aa8.73□□□□□ -1.01
AC004987.3-201ENST00000413879 PADI6Q6TGC4 694 aa8.72□□□□□ -1.01
AC004987.3-201ENST00000413879 RNF223E7ERA6 249 aa8.71□□□□□ -1.02
AC004987.3-201ENST00000413879 DGAT1O75907 488 aa8.7□□□□□ -1.02
AC004987.3-201ENST00000413879 MYT1Q01538 1121 aa8.7□□□□□ -1.02
AC004987.3-201ENST00000413879 TRIM67Q6ZTA4 783 aa8.7□□□□□ -1.02
AC004987.3-201ENST00000413879 SPRYD3Q8NCJ5 442 aa8.7□□□□□ -1.02
AC004987.3-201ENST00000413879 PLCB2Q00722 1185 aa8.69□□□□□ -1.02
AC004987.3-201ENST00000413879 SPRYD7Q5W111 196 aa8.69□□□□□ -1.02
AC004987.3-201ENST00000413879 ZNF598Q86UK7 904 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms