RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 USP47Q96K76 1375 aa17.17■□□□□ 0.34
SMARCA4-202ENST00000413806 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
SMARCA4-202ENST00000413806 APBB1O00213 710 aa17.17■□□□□ 0.34
SMARCA4-202ENST00000413806 SYAP1Q96A49 352 aaPredicted RBP17.17■□□□□ 0.34
SMARCA4-202ENST00000413806 SLKQ9H2G2 1235 aaPredicted RBP17.16■□□□□ 0.34
SMARCA4-202ENST00000413806 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
SMARCA4-202ENST00000413806 MFAP1P55081 439 aaKnown RBP17.16■□□□□ 0.34
SMARCA4-202ENST00000413806 HTATSF1O43719 755 aaKnown RBP17.15■□□□□ 0.34
SMARCA4-202ENST00000413806 PANK3Q9H999 370 aa17.15■□□□□ 0.34
SMARCA4-202ENST00000413806 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.33
SMARCA4-202ENST00000413806 TAOK2Q9UL54 1235 aa17.13■□□□□ 0.33
SMARCA4-202ENST00000413806 GPATCH3Q96I76 525 aa17.13■□□□□ 0.33
SMARCA4-202ENST00000413806 MYOM3Q5VTT5 1437 aa17.13■□□□□ 0.33
SMARCA4-202ENST00000413806 KIF21BO75037 1637 aa17.12■□□□□ 0.33
SMARCA4-202ENST00000413806 GSE1Q14687 1217 aa17.12■□□□□ 0.33
SMARCA4-202ENST00000413806 E9PSI1 815 aa17.12■□□□□ 0.33
SMARCA4-202ENST00000413806 RRP1P56182 461 aaKnown RBP17.12■□□□□ 0.33
SMARCA4-202ENST00000413806 FGD6Q6ZV73 1430 aa17.11■□□□□ 0.33
SMARCA4-202ENST00000413806 FGD5Q6ZNL6 1462 aa17.11■□□□□ 0.33
SMARCA4-202ENST00000413806 IGF1RP08069 1367 aa17.11■□□□□ 0.33
SMARCA4-202ENST00000413806 PAK3O75914 559 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-202ENST00000413806 A0A0U1RQG5 324 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-202ENST00000413806 NGEFQ8N5V2 710 aa17.1■□□□□ 0.33
SMARCA4-202ENST00000413806 GNL2Q13823 731 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-202ENST00000413806 FAM161AQ3B820 660 aa17.08■□□□□ 0.33
SMARCA4-202ENST00000413806 CLUAP1Q96AJ1 413 aa17.08■□□□□ 0.33
SMARCA4-202ENST00000413806 PTPRGP23470 1445 aa17.08■□□□□ 0.32
SMARCA4-202ENST00000413806 GAPVD1Q14C86 1478 aa17.08■□□□□ 0.32
SMARCA4-202ENST00000413806 CSPP1Q1MSJ5 1256 aa17.08■□□□□ 0.32
SMARCA4-202ENST00000413806 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.32
SMARCA4-202ENST00000413806 LRRC9Q6ZRR7 1453 aa17.07■□□□□ 0.32
SMARCA4-202ENST00000413806 TRAK1Q9UPV9 953 aa17.06■□□□□ 0.32
SMARCA4-202ENST00000413806 EID1Q9Y6B2 187 aa17.06■□□□□ 0.32
SMARCA4-202ENST00000413806 PDE4AP27815 886 aa17.06■□□□□ 0.32
SMARCA4-202ENST00000413806 EVC2Q86UK5 1308 aa17.05■□□□□ 0.32
SMARCA4-202ENST00000413806 ZNF771Q7L3S4 317 aaPredicted RBP17.05■□□□□ 0.32
SMARCA4-202ENST00000413806 GOLGA6L1Q8N7Z2 621 aa17.05■□□□□ 0.32
SMARCA4-202ENST00000413806 PODXL2Q9NZ53 605 aa17.05■□□□□ 0.32
SMARCA4-202ENST00000413806 TRIM6-TRIM34B2RNG4 842 aa17.04■□□□□ 0.32
SMARCA4-202ENST00000413806 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
SMARCA4-202ENST00000413806 ST18O60284 1047 aa17.04■□□□□ 0.32
SMARCA4-202ENST00000413806 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
SMARCA4-202ENST00000413806 FANCIQ9NVI1 1328 aa17.04■□□□□ 0.32
SMARCA4-202ENST00000413806 DDX11L8A8MPP1 907 aa17.04■□□□□ 0.32
SMARCA4-202ENST00000413806 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
SMARCA4-202ENST00000413806 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
SMARCA4-202ENST00000413806 ANO8Q9HCE9 1232 aaPredicted RBP17.03■□□□□ 0.32
SMARCA4-202ENST00000413806 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
SMARCA4-202ENST00000413806 CCDC7Q96M83 1385 aa17.03■□□□□ 0.32
SMARCA4-202ENST00000413806 CASKIN1Q8WXD9 1431 aa17.03■□□□□ 0.32
SMARCA4-202ENST00000413806 STAC3Q96MF2 364 aa17.03■□□□□ 0.32
SMARCA4-202ENST00000413806 CNTLNQ9NXG0 1405 aa17.02■□□□□ 0.32
SMARCA4-202ENST00000413806 EXOC6Q8TAG9 804 aa17.02■□□□□ 0.32
SMARCA4-202ENST00000413806 TRHP20396 242 aaPredicted RBP17.02■□□□□ 0.32
SMARCA4-202ENST00000413806 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.32
SMARCA4-202ENST00000413806 MIA2Q96PC5 1412 aa17.01■□□□□ 0.31
SMARCA4-202ENST00000413806 CRBNQ96SW2 442 aa17.01■□□□□ 0.31
SMARCA4-202ENST00000413806 AMPHP49418 695 aa17.01■□□□□ 0.31
SMARCA4-202ENST00000413806 TPM4P67936 248 aa17.01■□□□□ 0.31
SMARCA4-202ENST00000413806 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
SMARCA4-202ENST00000413806 NGDNQ8NEJ9 315 aaKnown RBP17.01■□□□□ 0.31
SMARCA4-202ENST00000413806 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
SMARCA4-202ENST00000413806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17■□□□□ 0.313e-7■■■■□ 26.2
SMARCA4-202ENST00000413806 RRP7AQ9Y3A4 280 aaKnown RBP17■□□□□ 0.31
SMARCA4-202ENST00000413806 PHF14O94880 888 aa17■□□□□ 0.31
SMARCA4-202ENST00000413806 TULP1O00294 542 aaPredicted RBP16.99■□□□□ 0.31
SMARCA4-202ENST00000413806 GORABQ5T7V8 394 aa16.97■□□□□ 0.31
SMARCA4-202ENST00000413806 PLIN1O60240 522 aa16.96■□□□□ 0.31
SMARCA4-202ENST00000413806 CCDC34Q96HJ3 373 aa16.96■□□□□ 0.31
SMARCA4-202ENST00000413806 COG3Q96JB2 828 aa16.96■□□□□ 0.31
SMARCA4-202ENST00000413806 RAD54L2Q9Y4B4 1467 aa16.96■□□□□ 0.31
SMARCA4-202ENST00000413806 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-202ENST00000413806 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.31
SMARCA4-202ENST00000413806 NCAPD3P42695 1498 aa16.96■□□□□ 0.31
SMARCA4-202ENST00000413806 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
SMARCA4-202ENST00000413806 KIF7Q2M1P5 1343 aa16.96■□□□□ 0.31
SMARCA4-202ENST00000413806 SKOR2Q2VWA4 1001 aaPredicted RBP16.95■□□□□ 0.3
SMARCA4-202ENST00000413806 NOC3LQ8WTT2 800 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-202ENST00000413806 CALRP27797 417 aaKnown RBP16.95■□□□□ 0.3
SMARCA4-202ENST00000413806 FAM13BQ9NYF5 915 aa16.95■□□□□ 0.3
SMARCA4-202ENST00000413806 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
SMARCA4-202ENST00000413806 KIF16BQ96L93 1317 aa16.94■□□□□ 0.3
SMARCA4-202ENST00000413806 KIF3AQ9Y496 699 aa16.94■□□□□ 0.3
SMARCA4-202ENST00000413806 APAF1O14727 1248 aa16.93■□□□□ 0.3
SMARCA4-202ENST00000413806 AAMPQ13685 434 aa16.93■□□□□ 0.3
SMARCA4-202ENST00000413806 TAF7LQ5H9L4 462 aa16.93■□□□□ 0.3
SMARCA4-202ENST00000413806 ANKRD45Q5TZF3 282 aa16.92■□□□□ 0.3
SMARCA4-202ENST00000413806 CHMP3Q9Y3E7 222 aa16.92■□□□□ 0.3
SMARCA4-202ENST00000413806 FOXD4L1Q9NU39 408 aa16.92■□□□□ 0.3
SMARCA4-202ENST00000413806 COG6Q9Y2V7 657 aa16.92■□□□□ 0.3
SMARCA4-202ENST00000413806 BRD4O60885 1362 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-202ENST00000413806 CHMP4CQ96CF2 233 aa16.91■□□□□ 0.3
SMARCA4-202ENST00000413806 ZNF330Q9Y3S2 320 aaPredicted RBP16.91■□□□□ 0.3
SMARCA4-202ENST00000413806 ANKRD50Q9ULJ7 1429 aa16.91■□□□□ 0.3
SMARCA4-202ENST00000413806 BCL2L13Q9BXK5 485 aa16.9■□□□□ 0.3
SMARCA4-202ENST00000413806 ROCK1Q13464 1354 aa16.9■□□□□ 0.3
SMARCA4-202ENST00000413806 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
SMARCA4-202ENST00000413806 EFCAB5A4FU69 1503 aa16.9■□□□□ 0.3
SMARCA4-202ENST00000413806 DIAPH1O60610 1272 aaKnown RBP16.9■□□□□ 0.3
SMARCA4-202ENST00000413806 API5Q9BZZ5 524 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms