RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 CCER2I3L3R5 266 aa18.06■□□□□ 0.48
LITAF-203ENST00000413364 ANO8Q9HCE9 1232 aaPredicted RBP18.06■□□□□ 0.48
LITAF-203ENST00000413364 FANCAO15360 1455 aa18.06■□□□□ 0.48
LITAF-203ENST00000413364 SPAG9O60271 1321 aaKnown RBP18.05■□□□□ 0.48
LITAF-203ENST00000413364 ZFYVE16Q7Z3T8 1539 aa18.04■□□□□ 0.48
LITAF-203ENST00000413364 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.03■□□□□ 0.48
LITAF-203ENST00000413364 CCDC7Q96M83 1385 aa18.03■□□□□ 0.48
LITAF-203ENST00000413364 ERICH6BQ5W0A0 696 aa18.02■□□□□ 0.47
LITAF-203ENST00000413364 AFAP1Q8N556 730 aa18.02■□□□□ 0.47
LITAF-203ENST00000413364 RALGAPBQ86X10 1494 aa18.01■□□□□ 0.47
LITAF-203ENST00000413364 CCDC144AA2RUR9 1427 aa18.01■□□□□ 0.47
LITAF-203ENST00000413364 NPM1P06748 294 aaKnown RBP eCLIP18.01■□□□□ 0.47
LITAF-203ENST00000413364 PLA2R1Q13018 1463 aa18.01■□□□□ 0.47
LITAF-203ENST00000413364 C11orf95C9JLR9 678 aaPredicted RBP18■□□□□ 0.47
LITAF-203ENST00000413364 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
LITAF-203ENST00000413364 CNTLNQ9NXG0 1405 aa17.99■□□□□ 0.47
LITAF-203ENST00000413364 INO80Q9ULG1 1556 aaPredicted RBP17.99■□□□□ 0.47
LITAF-203ENST00000413364 ADGRL1O94910 1474 aa17.98■□□□□ 0.47
LITAF-203ENST00000413364 ATP10AO60312 1499 aa17.98■□□□□ 0.47
LITAF-203ENST00000413364 USP47Q96K76 1375 aa17.98■□□□□ 0.47
LITAF-203ENST00000413364 ATP7AQ04656 1500 aa17.97■□□□□ 0.47
LITAF-203ENST00000413364 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
LITAF-203ENST00000413364 SCAPERQ9BY12 1400 aa17.97■□□□□ 0.47
LITAF-203ENST00000413364 EIF5BO60841 1220 aaKnown RBP17.97■□□□□ 0.47
LITAF-203ENST00000413364 KDM5CP41229 1560 aa17.96■□□□□ 0.47
LITAF-203ENST00000413364 DCAF11Q8TEB1 546 aa17.95■□□□□ 0.46
LITAF-203ENST00000413364 KIF7Q2M1P5 1343 aa17.95■□□□□ 0.46
LITAF-203ENST00000413364 KDM2AQ9Y2K7 1162 aa17.93■□□□□ 0.46
LITAF-203ENST00000413364 DEPDC5O75140 1603 aa17.93■□□□□ 0.46
LITAF-203ENST00000413364 CARD11Q9BXL7 1154 aa17.91■□□□□ 0.46
LITAF-203ENST00000413364 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
LITAF-203ENST00000413364 DAXXQ9UER7 740 aaPredicted RBP17.9■□□□□ 0.46
LITAF-203ENST00000413364 A2MP01023 1474 aa17.9■□□□□ 0.46
LITAF-203ENST00000413364 BCORL1Q5H9F3 1711 aa17.9■□□□□ 0.46
LITAF-203ENST00000413364 CFAP74Q9C0B2 1584 aa17.89■□□□□ 0.46
LITAF-203ENST00000413364 CD109Q6YHK3 1445 aa17.89■□□□□ 0.45
LITAF-203ENST00000413364 ARID4BQ4LE39 1312 aaPredicted RBP17.89■□□□□ 0.45
LITAF-203ENST00000413364 DHX29Q7Z478 1369 aaKnown RBP17.89■□□□□ 0.45
LITAF-203ENST00000413364 EIF2AK4Q9P2K8 1649 aaKnown RBP17.88■□□□□ 0.45
LITAF-203ENST00000413364 ZNF518AQ6AHZ1 1483 aa17.88■□□□□ 0.45
LITAF-203ENST00000413364 VWDEQ8N2E2 1590 aa17.88■□□□□ 0.45
LITAF-203ENST00000413364 E9PCH4 1651 aa17.87■□□□□ 0.45
LITAF-203ENST00000413364 TRPM1Q7Z4N2 1603 aa17.87■□□□□ 0.45
LITAF-203ENST00000413364 KANK1Q14678 1352 aa17.86■□□□□ 0.45
LITAF-203ENST00000413364 RGL3Q3MIN7 710 aa17.86■□□□□ 0.45
LITAF-203ENST00000413364 TET3O43151 1660 aa17.86■□□□□ 0.45
LITAF-203ENST00000413364 ROCK2O75116 1388 aaKnown RBP17.86■□□□□ 0.45
LITAF-203ENST00000413364 RBM19Q9Y4C8 960 aaKnown RBP17.86■□□□□ 0.45
LITAF-203ENST00000413364 KIDINS220Q9ULH0 1771 aa17.85■□□□□ 0.45
LITAF-203ENST00000413364 TRPM2O94759 1503 aa17.85■□□□□ 0.45
LITAF-203ENST00000413364 PTPRTO14522 1441 aa17.85■□□□□ 0.45
LITAF-203ENST00000413364 PRDM15P57071 1507 aaPredicted RBP17.84■□□□□ 0.45
LITAF-203ENST00000413364 KIF3BO15066 747 aa17.83■□□□□ 0.45
LITAF-203ENST00000413364 POGZQ7Z3K3 1410 aa17.83■□□□□ 0.45
LITAF-203ENST00000413364 GPRASP1Q5JY77 1395 aa17.83■□□□□ 0.44
LITAF-203ENST00000413364 MROH1Q8NDA8 1641 aa17.82■□□□□ 0.44
LITAF-203ENST00000413364 PRKRIP1Q9H875 184 aaPredicted RBP17.82■□□□□ 0.44
LITAF-203ENST00000413364 SPHKAPQ2M3C7 1700 aa17.81■□□□□ 0.44
LITAF-203ENST00000413364 LAMC1P11047 1609 aa17.81■□□□□ 0.44
LITAF-203ENST00000413364 ST20-MTHFSA0A0A6YYL1 179 aa17.81■□□□□ 0.44
LITAF-203ENST00000413364 MLH3Q9UHC1 1453 aa17.79■□□□□ 0.44
LITAF-203ENST00000413364 NEO1Q92859 1461 aa17.79■□□□□ 0.44
LITAF-203ENST00000413364 NBPF1Q3BBV0 1214 aa17.77■□□□□ 0.44
LITAF-203ENST00000413364 CEP152O94986 1710 aa17.77■□□□□ 0.44
LITAF-203ENST00000413364 CLTCL1P53675 1640 aa17.77■□□□□ 0.44
LITAF-203ENST00000413364 DEKP35659 375 aaKnown RBP17.77■□□□□ 0.43
LITAF-203ENST00000413364 SALL2Q9Y467 1007 aaPredicted RBP17.77■□□□□ 0.43
LITAF-203ENST00000413364 HECW2Q9P2P5 1572 aa17.76■□□□□ 0.43
LITAF-203ENST00000413364 RNF17Q9BXT8 1623 aaKnown RBP17.76■□□□□ 0.43
LITAF-203ENST00000413364 POLR3GLQ9BT43 218 aa17.75■□□□□ 0.43
LITAF-203ENST00000413364 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
LITAF-203ENST00000413364 EFCAB6Q5THR3 1501 aa17.74■□□□□ 0.43
LITAF-203ENST00000413364 STAC3Q96MF2 364 aa17.74■□□□□ 0.43
LITAF-203ENST00000413364 FRMPD1Q5SYB0 1578 aa17.73■□□□□ 0.43
LITAF-203ENST00000413364 NEURL4Q96JN8 1562 aa17.73■□□□□ 0.43
LITAF-203ENST00000413364 FANCIQ9NVI1 1328 aa17.73■□□□□ 0.43
LITAF-203ENST00000413364 CCDC184Q52MB2 194 aa17.72■□□□□ 0.43
LITAF-203ENST00000413364 MADDQ8WXG6 1647 aa17.72■□□□□ 0.43
LITAF-203ENST00000413364 MAP3K4Q9Y6R4 1608 aa17.71■□□□□ 0.43
LITAF-203ENST00000413364 CYB5RLQ6IPT4 315 aa17.7■□□□□ 0.42
LITAF-203ENST00000413364 PPRC1Q5VV67 1664 aaKnown RBP17.7■□□□□ 0.42
LITAF-203ENST00000413364 RIMBP3CA6NJZ7 1639 aa17.7■□□□□ 0.42
LITAF-203ENST00000413364 RIMBP3BA6NNM3 1639 aa17.7■□□□□ 0.42
LITAF-203ENST00000413364 RIMBP3Q9UFD9 1639 aa17.7■□□□□ 0.42
LITAF-203ENST00000413364 ABCA6Q8N139 1617 aa17.7■□□□□ 0.42
LITAF-203ENST00000413364 GLI2P10070 1586 aa17.7■□□□□ 0.42
LITAF-203ENST00000413364 MSH5O43196 834 aa17.69■□□□□ 0.42
LITAF-203ENST00000413364 MRS2Q9HD23 443 aa17.69■□□□□ 0.42
LITAF-203ENST00000413364 HNRNPUQ00839 825 aaKnown RBP eCLIP17.68■□□□□ 0.42
LITAF-203ENST00000413364 COL17A1Q9UMD9 1497 aaPredicted RBP17.67■□□□□ 0.42
LITAF-203ENST00000413364 RAPGEF3O95398 923 aa17.67■□□□□ 0.42
LITAF-203ENST00000413364 TESK2Q96S53 571 aa17.67■□□□□ 0.42
LITAF-203ENST00000413364 UGGT1Q9NYU2 1555 aa17.65■□□□□ 0.42
LITAF-203ENST00000413364 RICTORQ6R327 1708 aa17.64■□□□□ 0.41
LITAF-203ENST00000413364 DIP2CQ9Y2E4 1556 aa17.64■□□□□ 0.41
LITAF-203ENST00000413364 MYOM2P54296 1465 aa17.63■□□□□ 0.41
LITAF-203ENST00000413364 IQGAP1P46940 1657 aa17.63■□□□□ 0.41
LITAF-203ENST00000413364 KIF1BO60333 1816 aa17.62■□□□□ 0.41
LITAF-203ENST00000413364 KTN1Q86UP2 1357 aaKnown RBP17.62■□□□□ 0.41
LITAF-203ENST00000413364 GGT6Q6P531 493 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms