RNA–Protein interactions for RNA: ENST00000412996.1

AC004870.3-202, humanhuman

TSL 3 BASIC

Gene AC004870.3, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004870.3-202ENST00000412996 PTPN5P54829 565 aa12.23□□□□□ -0.45
AC004870.3-202ENST00000412996 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
AC004870.3-202ENST00000412996 GOLGA8CPA6NN73 597 aa12.22□□□□□ -0.45
AC004870.3-202ENST00000412996 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
AC004870.3-202ENST00000412996 DDX12PQ92771 950 aa12.2□□□□□ -0.46
AC004870.3-202ENST00000412996 EPAS1Q99814 870 aa12.2□□□□□ -0.46
AC004870.3-202ENST00000412996 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
AC004870.3-202ENST00000412996 WNT2BQ93097 391 aa12.19□□□□□ -0.46
AC004870.3-202ENST00000412996 C6orf132Q5T0Z8 1188 aa12.18□□□□□ -0.46
AC004870.3-202ENST00000412996 THSD4Q6ZMP0 1018 aa12.18□□□□□ -0.46
AC004870.3-202ENST00000412996 RABGEF1Q9UJ41 708 aa12.18□□□□□ -0.46
AC004870.3-202ENST00000412996 RBM33Q96EV2 1170 aaKnown RBP12.17□□□□□ -0.46
AC004870.3-202ENST00000412996 E2F4Q16254 413 aa12.15□□□□□ -0.46
AC004870.3-202ENST00000412996 PDIA6Q15084 440 aa12.14□□□□□ -0.47
AC004870.3-202ENST00000412996 WDR70Q9NW82 654 aa12.14□□□□□ -0.47
AC004870.3-202ENST00000412996 KIAA1468Q9P260 1216 aa12.12□□□□□ -0.47
AC004870.3-202ENST00000412996 SPDYE16A6NNV3 312 aaPredicted RBP12.11□□□□□ -0.47
AC004870.3-202ENST00000412996 NBR1Q14596 966 aa12.11□□□□□ -0.47
AC004870.3-202ENST00000412996 ONECUT3O60422 494 aaPredicted RBP12.08□□□□□ -0.48
AC004870.3-202ENST00000412996 EN1Q05925 392 aaPredicted RBP12.08□□□□□ -0.48
AC004870.3-202ENST00000412996 MAP3K7O43318 606 aa12.07□□□□□ -0.48
AC004870.3-202ENST00000412996 TSR1Q2NL82 804 aaKnown RBP12.07□□□□□ -0.48
AC004870.3-202ENST00000412996 ANKK1Q8NFD2 765 aa12.07□□□□□ -0.48
AC004870.3-202ENST00000412996 TRIM6-TRIM34B2RNG4 842 aa12.06□□□□□ -0.48
AC004870.3-202ENST00000412996 LAPTM4BQ86VI4 370 aa12.06□□□□□ -0.48
AC004870.3-202ENST00000412996 ARIH1Q9Y4X5 557 aaPredicted RBP12.06□□□□□ -0.48
AC004870.3-202ENST00000412996 SEPT9Q9UHD8 586 aaPredicted RBP12.05□□□□□ -0.48
AC004870.3-202ENST00000412996 GRXCR2A6NFK2 248 aa12.04□□□□□ -0.48
AC004870.3-202ENST00000412996 ZFRQ96KR1 1074 aaKnown RBP12.04□□□□□ -0.48
AC004870.3-202ENST00000412996 BCAMP50895 628 aa12.03□□□□□ -0.48
AC004870.3-202ENST00000412996 PRIM1P49642 420 aaKnown RBP12.02□□□□□ -0.49
AC004870.3-202ENST00000412996 SOWAHBA6NEL2 793 aa12.01□□□□□ -0.49
AC004870.3-202ENST00000412996 TSKSQ9UJT2 592 aa12□□□□□ -0.49
AC004870.3-202ENST00000412996 FAM98CQ17RN3 349 aaKnown RBP11.98□□□□□ -0.49
AC004870.3-202ENST00000412996 PACS2Q86VP3 889 aa11.98□□□□□ -0.49
AC004870.3-202ENST00000412996 IFFO2Q5TF58 517 aa11.97□□□□□ -0.49
AC004870.3-202ENST00000412996 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
AC004870.3-202ENST00000412996 OSBPP22059 807 aa11.95□□□□□ -0.5
AC004870.3-202ENST00000412996 CDCA7LQ96GN5 454 aa11.95□□□□□ -0.5
AC004870.3-202ENST00000412996 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
AC004870.3-202ENST00000412996 PRSS12P56730 875 aa11.94□□□□□ -0.5
AC004870.3-202ENST00000412996 FAM198AQ9UFP1 575 aa11.93□□□□□ -0.5
AC004870.3-202ENST00000412996 CERKQ8TCT0 537 aa11.92□□□□□ -0.5
AC004870.3-202ENST00000412996 LRCH3Q96II8 777 aa11.92□□□□□ -0.5
AC004870.3-202ENST00000412996 CDHR5Q9HBB8 845 aa11.92□□□□□ -0.5
AC004870.3-202ENST00000412996 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.92□□□□□ -0.5
AC004870.3-202ENST00000412996 SMAPO00193 183 aa11.91□□□□□ -0.5
AC004870.3-202ENST00000412996 NYAP1Q6ZVC0 841 aa11.9□□□□□ -0.5
AC004870.3-202ENST00000412996 HPS5Q9UPZ3 1129 aa11.9□□□□□ -0.5
AC004870.3-202ENST00000412996 A0A0G2JS52 829 aa11.89□□□□□ -0.51
AC004870.3-202ENST00000412996 TSR3Q9UJK0 312 aaKnown RBP11.89□□□□□ -0.51
AC004870.3-202ENST00000412996 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
AC004870.3-202ENST00000412996 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
AC004870.3-202ENST00000412996 TATDN2Q93075 761 aa11.87□□□□□ -0.51
AC004870.3-202ENST00000412996 PNMA3Q9UL41 463 aa11.86□□□□□ -0.51
AC004870.3-202ENST00000412996 ARHGEF1Q92888 912 aaKnown RBP11.85□□□□□ -0.51
AC004870.3-202ENST00000412996 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
AC004870.3-202ENST00000412996 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
AC004870.3-202ENST00000412996 NBPF26B4DH59 902 aa11.83□□□□□ -0.52
AC004870.3-202ENST00000412996 RGS20O76081 388 aa11.83□□□□□ -0.52
AC004870.3-202ENST00000412996 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
AC004870.3-202ENST00000412996 MLLT3P42568 568 aaPredicted RBP11.82□□□□□ -0.52
AC004870.3-202ENST00000412996 PPP4CP60510 307 aa11.82□□□□□ -0.52
AC004870.3-202ENST00000412996 NUDT18Q6ZVK8 323 aa11.82□□□□□ -0.52
AC004870.3-202ENST00000412996 KCNC4Q03721 635 aa11.81□□□□□ -0.52
AC004870.3-202ENST00000412996 RBM27Q9P2N5 1060 aaKnown RBP11.8□□□□□ -0.52
AC004870.3-202ENST00000412996 PADI6Q6TGC4 694 aa11.79□□□□□ -0.52
AC004870.3-202ENST00000412996 TTC13Q8NBP0 860 aa11.77□□□□□ -0.53
AC004870.3-202ENST00000412996 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
AC004870.3-202ENST00000412996 RNF40O75150 1001 aa11.74□□□□□ -0.53
AC004870.3-202ENST00000412996 TJAP1Q5JTD0 557 aa11.7□□□□□ -0.54
AC004870.3-202ENST00000412996 SWT1Q5T5J6 900 aaKnown RBP11.7□□□□□ -0.54
AC004870.3-202ENST00000412996 IRX2Q9BZI1 471 aaPredicted RBP11.7□□□□□ -0.54
AC004870.3-202ENST00000412996 PTGDRQ13258 359 aa11.69□□□□□ -0.54
AC004870.3-202ENST00000412996 EYA1Q99502 592 aa11.69□□□□□ -0.54
AC004870.3-202ENST00000412996 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
AC004870.3-202ENST00000412996 MTRQ99707 1265 aa11.68□□□□□ -0.54
AC004870.3-202ENST00000412996 APLP1P51693 650 aa11.67□□□□□ -0.54
AC004870.3-202ENST00000412996 SEMA3EO15041 775 aa11.66□□□□□ -0.54
AC004870.3-202ENST00000412996 NUTM2FA1L443 756 aa11.65□□□□□ -0.54
AC004870.3-202ENST00000412996 PLCB2Q00722 1185 aa11.65□□□□□ -0.54
AC004870.3-202ENST00000412996 SLF2Q8IX21 1173 aa11.64□□□□□ -0.55
AC004870.3-202ENST00000412996 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
AC004870.3-202ENST00000412996 ZNF516Q92618 1163 aa11.63□□□□□ -0.55
AC004870.3-202ENST00000412996 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
AC004870.3-202ENST00000412996 SLC4A3P48751 1232 aa11.6□□□□□ -0.55
AC004870.3-202ENST00000412996 ADGRG1Q9Y653 693 aa11.6□□□□□ -0.55
AC004870.3-202ENST00000412996 FAM161AQ3B820 660 aa11.59□□□□□ -0.55
AC004870.3-202ENST00000412996 RBM46Q8TBY0 533 aaKnown RBP11.59□□□□□ -0.55
AC004870.3-202ENST00000412996 DNAJB2P25686 324 aa11.57□□□□□ -0.56
AC004870.3-202ENST00000412996 COPS2P61201 443 aa11.57□□□□□ -0.56
AC004870.3-202ENST00000412996 PPP1R18Q6NYC8 613 aa11.57□□□□□ -0.56
AC004870.3-202ENST00000412996 FCHSD2O94868 740 aa11.56□□□□□ -0.56
AC004870.3-202ENST00000412996 NKX2-3Q8TAU0 364 aa11.56□□□□□ -0.56
AC004870.3-202ENST00000412996 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
AC004870.3-202ENST00000412996 TMEM134Q9H6X4 195 aa11.54□□□□□ -0.56
AC004870.3-202ENST00000412996 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
AC004870.3-202ENST00000412996 RBM26Q5T8P6 1007 aaKnown RBP11.52□□□□□ -0.57
AC004870.3-202ENST00000412996 PRKD2Q9BZL6 878 aa11.52□□□□□ -0.57
AC004870.3-202ENST00000412996 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms