RNA–Protein interactions for RNA: ENST00000411788.5

SEMA3C-202, Transcript of semaphorin 3C, humanhuman

TSL 5

Gene SEMA3C, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-202ENST00000411788 EVI5O60447 810 aa7.26□□□□□ -1.25
SEMA3C-202ENST00000411788 DNAJC5Q9H3Z4 198 aa7.26□□□□□ -1.25
SEMA3C-202ENST00000411788 ADAM33Q9BZ11 813 aa7.25□□□□□ -1.25
SEMA3C-202ENST00000411788 ANKK1Q8NFD2 765 aa7.23□□□□□ -1.25
SEMA3C-202ENST00000411788 MAP3K9P80192 1104 aa7.22□□□□□ -1.25
SEMA3C-202ENST00000411788 NKX1-1Q15270 411 aaPredicted RBP7.22□□□□□ -1.25
SEMA3C-202ENST00000411788 RABGEF1Q9UJ41 708 aa7.22□□□□□ -1.25
SEMA3C-202ENST00000411788 NCKAP5LQ9HCH0 1330 aa7.22□□□□□ -1.25
SEMA3C-202ENST00000411788 PPP1R3GB7ZBB8 358 aa7.21□□□□□ -1.26
SEMA3C-202ENST00000411788 ITGBL1O95965 494 aaPredicted RBP7.2□□□□□ -1.26
SEMA3C-202ENST00000411788 DDX27Q96GQ7 796 aaKnown RBP7.2□□□□□ -1.26
SEMA3C-202ENST00000411788 NYAP1Q6ZVC0 841 aa7.19□□□□□ -1.26
SEMA3C-202ENST00000411788 LAPTM4BQ86VI4 370 aa7.19□□□□□ -1.26
SEMA3C-202ENST00000411788 LARP6Q9BRS8 491 aaKnown RBP7.19□□□□□ -1.26
SEMA3C-202ENST00000411788 FBXW7Q969H0 707 aa7.17□□□□□ -1.26
SEMA3C-202ENST00000411788 PCDHGA10Q9Y5H3 936 aa7.17□□□□□ -1.26
SEMA3C-202ENST00000411788 SOWAHBA6NEL2 793 aa7.16□□□□□ -1.26
SEMA3C-202ENST00000411788 PROX2Q3B8N5 592 aa7.16□□□□□ -1.26
SEMA3C-202ENST00000411788 Q6ZNB5 142 aa7.16□□□□□ -1.26
SEMA3C-202ENST00000411788 ONECUT3O60422 494 aaPredicted RBP7.15□□□□□ -1.26
SEMA3C-202ENST00000411788 PHF14O94880 888 aa7.15□□□□□ -1.26
SEMA3C-202ENST00000411788 BCAMP50895 628 aa7.15□□□□□ -1.26
SEMA3C-202ENST00000411788 TYW1BQ6NUM6 668 aa7.15□□□□□ -1.26
SEMA3C-202ENST00000411788 COL9A1P20849 921 aa7.14□□□□□ -1.27
SEMA3C-202ENST00000411788 KCNC4Q03721 635 aa7.14□□□□□ -1.27
SEMA3C-202ENST00000411788 MFSD10Q14728 455 aa7.14□□□□□ -1.27
SEMA3C-202ENST00000411788 ZFRQ96KR1 1074 aaKnown RBP7.13□□□□□ -1.27
SEMA3C-202ENST00000411788 EMILIN3Q9NT22 766 aa7.13□□□□□ -1.27
SEMA3C-202ENST00000411788 KIAA1468Q9P260 1216 aa7.13□□□□□ -1.27
SEMA3C-202ENST00000411788 GTPBP6O43824 516 aaPredicted RBP7.11□□□□□ -1.27
SEMA3C-202ENST00000411788 LAPTM4AQ15012 233 aa7.11□□□□□ -1.27
SEMA3C-202ENST00000411788 EPAS1Q99814 870 aa7.11□□□□□ -1.27
SEMA3C-202ENST00000411788 TSHZ2Q9NRE2 1034 aa7.11□□□□□ -1.27
SEMA3C-202ENST00000411788 WBP1LQ9NX94 342 aa7.11□□□□□ -1.27
SEMA3C-202ENST00000411788 KDM2AQ9Y2K7 1162 aa7.11□□□□□ -1.27
SEMA3C-202ENST00000411788 NBR1Q14596 966 aa7.09□□□□□ -1.27
SEMA3C-202ENST00000411788 TSR3Q9UJK0 312 aaKnown RBP7.09□□□□□ -1.27
SEMA3C-202ENST00000411788 FAM98CQ17RN3 349 aaKnown RBP7.08□□□□□ -1.28
SEMA3C-202ENST00000411788 C6orf132Q5T0Z8 1188 aa7.08□□□□□ -1.28
SEMA3C-202ENST00000411788 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.08□□□□□ -1.28
SEMA3C-202ENST00000411788 SEPT9Q9UHD8 586 aaPredicted RBP7.08□□□□□ -1.28
SEMA3C-202ENST00000411788 TRIM6-TRIM34B2RNG4 842 aa7.07□□□□□ -1.28
SEMA3C-202ENST00000411788 LRCH3Q96II8 777 aa7.07□□□□□ -1.28
SEMA3C-202ENST00000411788 HPS5Q9UPZ3 1129 aa7.06□□□□□ -1.28
SEMA3C-202ENST00000411788 GFRA3O60609 400 aa7.03□□□□□ -1.28
SEMA3C-202ENST00000411788 PPP4CP60510 307 aa7.02□□□□□ -1.29
SEMA3C-202ENST00000411788 TRAF7Q6Q0C0 670 aa7.02□□□□□ -1.29
SEMA3C-202ENST00000411788 PACS2Q86VP3 889 aa7.02□□□□□ -1.29
SEMA3C-202ENST00000411788 P3H3Q8IVL6 736 aa7.02□□□□□ -1.29
SEMA3C-202ENST00000411788 RBM33Q96EV2 1170 aaKnown RBP7.02□□□□□ -1.29
SEMA3C-202ENST00000411788 DPYSL4O14531 572 aa7.01□□□□□ -1.29
SEMA3C-202ENST00000411788 CAMK2BQ13554 666 aa7.01□□□□□ -1.29
SEMA3C-202ENST00000411788 CADPS2Q86UW7 1296 aa6.99□□□□□ -1.29
SEMA3C-202ENST00000411788 NRG2O14511 850 aaPredicted RBP6.98□□□□□ -1.29
SEMA3C-202ENST00000411788 DDX12PQ92771 950 aa6.98□□□□□ -1.29
SEMA3C-202ENST00000411788 PRKD2Q9BZL6 878 aa6.98□□□□□ -1.29
SEMA3C-202ENST00000411788 MAP3K7O43318 606 aa6.97□□□□□ -1.29
SEMA3C-202ENST00000411788 EN1Q05925 392 aaPredicted RBP6.97□□□□□ -1.29
SEMA3C-202ENST00000411788 TJAP1Q5JTD0 557 aa6.97□□□□□ -1.29
SEMA3C-202ENST00000411788 BCL11AQ9H165 835 aa6.97□□□□□ -1.29
SEMA3C-202ENST00000411788 TSKSQ9UJT2 592 aa6.97□□□□□ -1.29
SEMA3C-202ENST00000411788 TPRNQ4KMQ1 711 aa6.96□□□□□ -1.3
SEMA3C-202ENST00000411788 IL21Q9HBE4 155 aa6.96□□□□□ -1.3
SEMA3C-202ENST00000411788 V9GY48 417 aaPredicted RBP6.96□□□□□ -1.3
SEMA3C-202ENST00000411788 LCE2BO14633 110 aa6.95□□□□□ -1.3
SEMA3C-202ENST00000411788 SAMD7Q7Z3H4 446 aa6.95□□□□□ -1.3
SEMA3C-202ENST00000411788 WDR70Q9NW82 654 aa6.95□□□□□ -1.3
SEMA3C-202ENST00000411788 TSR1Q2NL82 804 aaKnown RBP6.94□□□□□ -1.3
SEMA3C-202ENST00000411788 PPP1R18Q6NYC8 613 aa6.94□□□□□ -1.3
SEMA3C-202ENST00000411788 CERKQ8TCT0 537 aa6.94□□□□□ -1.3
SEMA3C-202ENST00000411788 MTRQ99707 1265 aa6.94□□□□□ -1.3
SEMA3C-202ENST00000411788 EIF5BO60841 1220 aaKnown RBP6.93□□□□□ -1.3
SEMA3C-202ENST00000411788 HDGFP51858 240 aaKnown RBP6.93□□□□□ -1.3
SEMA3C-202ENST00000411788 CDCA7LQ96GN5 454 aa6.93□□□□□ -1.3
SEMA3C-202ENST00000411788 SPDYE16A6NNV3 312 aaPredicted RBP6.92□□□□□ -1.3
SEMA3C-202ENST00000411788 NBPF26B4DH59 902 aa6.92□□□□□ -1.3
SEMA3C-202ENST00000411788 PRSS12P56730 875 aa6.92□□□□□ -1.3
SEMA3C-202ENST00000411788 PDIA6Q15084 440 aa6.92□□□□□ -1.3
SEMA3C-202ENST00000411788 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.92□□□□□ -1.3
SEMA3C-202ENST00000411788 SMAPO00193 183 aa6.91□□□□□ -1.3
SEMA3C-202ENST00000411788 TULP1O00294 542 aaPredicted RBP6.9□□□□□ -1.3
SEMA3C-202ENST00000411788 GGCXP38435 758 aa6.9□□□□□ -1.3
SEMA3C-202ENST00000411788 ZNF787Q6DD87 383 aa6.9□□□□□ -1.3
SEMA3C-202ENST00000411788 NECTIN2Q92692 538 aa6.9□□□□□ -1.3
SEMA3C-202ENST00000411788 TATDN2Q93075 761 aa6.9□□□□□ -1.3
SEMA3C-202ENST00000411788 PNMA3Q9UL41 463 aa6.9□□□□□ -1.3
SEMA3C-202ENST00000411788 RNF40O75150 1001 aa6.89□□□□□ -1.31
SEMA3C-202ENST00000411788 PDZRN3Q9UPQ7 1066 aa6.89□□□□□ -1.31
SEMA3C-202ENST00000411788 ZNF516Q92618 1163 aa6.88□□□□□ -1.31
SEMA3C-202ENST00000411788 FAM198AQ9UFP1 575 aa6.87□□□□□ -1.31
SEMA3C-202ENST00000411788 APLP1P51693 650 aa6.86□□□□□ -1.31
SEMA3C-202ENST00000411788 RBM27Q9P2N5 1060 aaKnown RBP6.86□□□□□ -1.31
SEMA3C-202ENST00000411788 NUDT18Q6ZVK8 323 aa6.85□□□□□ -1.31
SEMA3C-202ENST00000411788 TMUB1Q9BVT8 246 aa6.85□□□□□ -1.31
SEMA3C-202ENST00000411788 GRXCR2A6NFK2 248 aa6.84□□□□□ -1.31
SEMA3C-202ENST00000411788 C3orf80F5H4A9 247 aa6.84□□□□□ -1.31
SEMA3C-202ENST00000411788 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
SEMA3C-202ENST00000411788 SLF2Q8IX21 1173 aa6.84□□□□□ -1.31
SEMA3C-202ENST00000411788 NKX2-3Q8TAU0 364 aa6.84□□□□□ -1.31
SEMA3C-202ENST00000411788 HRCP23327 699 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms