RNA–Protein interactions for RNA: ENST00000410833.1

RNU2-40P-201, Transcript of RNA, U2 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU2-40P, Length 196 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-40P-201ENST00000410833 STK17AQ9UEE5 414 aa4.13□□□□□ -1.75
RNU2-40P-201ENST00000410833 PPP1R3GB7ZBB8 358 aa4.12□□□□□ -1.75
RNU2-40P-201ENST00000410833 MYT1Q01538 1121 aa4.12□□□□□ -1.75
RNU2-40P-201ENST00000410833 TSR3Q9UJK0 312 aaKnown RBP4.12□□□□□ -1.75
RNU2-40P-201ENST00000410833 HPS5Q9UPZ3 1129 aa4.12□□□□□ -1.75
RNU2-40P-201ENST00000410833 COL9A1P20849 921 aa4.11□□□□□ -1.75
RNU2-40P-201ENST00000410833 TJAP1Q5JTD0 557 aa4.11□□□□□ -1.75
RNU2-40P-201ENST00000410833 KIAA1468Q9P260 1216 aa4.11□□□□□ -1.75
RNU2-40P-201ENST00000410833 SEPT9Q9UHD8 586 aaPredicted RBP4.11□□□□□ -1.75
RNU2-40P-201ENST00000410833 TAOK2Q9UL54 1235 aa4.11□□□□□ -1.75
RNU2-40P-201ENST00000410833 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.1□□□□□ -1.75
RNU2-40P-201ENST00000410833 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.1□□□□□ -1.75
RNU2-40P-201ENST00000410833 PKDCCQ504Y2 493 aa4.09□□□□□ -1.75
RNU2-40P-201ENST00000410833 LRCH3Q96II8 777 aa4.09□□□□□ -1.75
RNU2-40P-201ENST00000410833 ANO8Q9HCE9 1232 aaPredicted RBP4.09□□□□□ -1.75
RNU2-40P-201ENST00000410833 WFS1O76024 890 aa4.08□□□□□ -1.76
RNU2-40P-201ENST00000410833 TRIM67Q6ZTA4 783 aa4.08□□□□□ -1.76
RNU2-40P-201ENST00000410833 EVI5O60447 810 aa4.07□□□□□ -1.76
RNU2-40P-201ENST00000410833 DGAT1O75907 488 aa4.07□□□□□ -1.76
RNU2-40P-201ENST00000410833 FAM98CQ17RN3 349 aaKnown RBP4.07□□□□□ -1.76
RNU2-40P-201ENST00000410833 ZNF516Q92618 1163 aa4.07□□□□□ -1.76
RNU2-40P-201ENST00000410833 MTRQ99707 1265 aa4.07□□□□□ -1.76
RNU2-40P-201ENST00000410833 IL21Q9HBE4 155 aa4.06□□□□□ -1.76
RNU2-40P-201ENST00000410833 PPP4CP60510 307 aa4.05□□□□□ -1.76
RNU2-40P-201ENST00000410833 INSM1Q01101 510 aaPredicted RBP4.05□□□□□ -1.76
RNU2-40P-201ENST00000410833 NKX2-3Q8TAU0 364 aa4.05□□□□□ -1.76
RNU2-40P-201ENST00000410833 ST8SIA5O15466 376 aa4.04□□□□□ -1.76
RNU2-40P-201ENST00000410833 WIPF1O43516 503 aa4.04□□□□□ -1.76
RNU2-40P-201ENST00000410833 ONECUT3O60422 494 aaPredicted RBP4.04□□□□□ -1.76
RNU2-40P-201ENST00000410833 PCDHGA10Q9Y5H3 936 aa4.04□□□□□ -1.76
RNU2-40P-201ENST00000410833 FAM187AA6NFU0 413 aa4.03□□□□□ -1.76
RNU2-40P-201ENST00000410833 NFX1Q12986 1120 aaKnown RBP4.03□□□□□ -1.76
RNU2-40P-201ENST00000410833 SUZ12Q15022 739 aaKnown RBP4.03□□□□□ -1.76
RNU2-40P-201ENST00000410833 TRIM6-TRIM34B2RNG4 842 aa4.02□□□□□ -1.77
RNU2-40P-201ENST00000410833 PPP1R15BQ5SWA1 713 aa4.02□□□□□ -1.77
RNU2-40P-201ENST00000410833 GGCXP38435 758 aa4.01□□□□□ -1.77
RNU2-40P-201ENST00000410833 SLC19A1P41440 591 aa4.01□□□□□ -1.77
RNU2-40P-201ENST00000410833 TYW1BQ6NUM6 668 aa4.01□□□□□ -1.77
RNU2-40P-201ENST00000410833 AAASQ9NRG9 546 aa4.01□□□□□ -1.77
RNU2-40P-201ENST00000410833 PRR20EP86478 221 aa4□□□□□ -1.77
RNU2-40P-201ENST00000410833 PRR20CP86479 221 aa4□□□□□ -1.77
RNU2-40P-201ENST00000410833 PRR20DP86480 221 aa4□□□□□ -1.77
RNU2-40P-201ENST00000410833 PRR20BP86481 221 aa4□□□□□ -1.77
RNU2-40P-201ENST00000410833 PRR20AP86496 221 aa4□□□□□ -1.77
RNU2-40P-201ENST00000410833 SAMD7Q7Z3H4 446 aa4□□□□□ -1.77
RNU2-40P-201ENST00000410833 FBXW7Q969H0 707 aa4□□□□□ -1.77
RNU2-40P-201ENST00000410833 EMID1Q96A84 441 aaPredicted RBP4□□□□□ -1.77
RNU2-40P-201ENST00000410833 DACH1Q9UI36 760 aa4□□□□□ -1.77
RNU2-40P-201ENST00000410833 TNFRSF10AO00220 468 aa3.99□□□□□ -1.77
RNU2-40P-201ENST00000410833 MAP3K9P80192 1104 aa3.99□□□□□ -1.77
RNU2-40P-201ENST00000410833 C6orf132Q5T0Z8 1188 aa3.99□□□□□ -1.77
RNU2-40P-201ENST00000410833 LCE2CQ5TA81 110 aa3.99□□□□□ -1.77
RNU2-40P-201ENST00000410833 TMUB1Q9BVT8 246 aa3.99□□□□□ -1.77
RNU2-40P-201ENST00000410833 CRISPLD2Q9H0B8 497 aa3.99□□□□□ -1.77
RNU2-40P-201ENST00000410833 C11orf95C9JLR9 678 aaPredicted RBP3.98□□□□□ -1.77
RNU2-40P-201ENST00000410833 SPRYD7Q5W111 196 aa3.98□□□□□ -1.77
RNU2-40P-201ENST00000410833 ZNF598Q86UK7 904 aaKnown RBP3.98□□□□□ -1.77
RNU2-40P-201ENST00000410833 PHF14O94880 888 aa3.97□□□□□ -1.77
RNU2-40P-201ENST00000410833 APLP1P51693 650 aa3.97□□□□□ -1.77
RNU2-40P-201ENST00000410833 COPS2P61201 443 aa3.97□□□□□ -1.77
RNU2-40P-201ENST00000410833 RNF223E7ERA6 249 aa3.96□□□□□ -1.78
RNU2-40P-201ENST00000410833 SMAPO00193 183 aa3.96□□□□□ -1.78
RNU2-40P-201ENST00000410833 GDF9O60383 454 aa3.96□□□□□ -1.78
RNU2-40P-201ENST00000410833 ZNF697Q5TEC3 545 aa3.96□□□□□ -1.78
RNU2-40P-201ENST00000410833 GMPR2Q9P2T1 348 aaKnown RBP3.96□□□□□ -1.78
RNU2-40P-201ENST00000410833 TSKSQ9UJT2 592 aa3.96□□□□□ -1.78
RNU2-40P-201ENST00000410833 RGL2O15211 777 aa3.95□□□□□ -1.78
RNU2-40P-201ENST00000410833 PACS2Q86VP3 889 aa3.95□□□□□ -1.78
RNU2-40P-201ENST00000410833 FAM181BA6NEQ2 426 aa3.94□□□□□ -1.78
RNU2-40P-201ENST00000410833 RNF40O75150 1001 aa3.94□□□□□ -1.78
RNU2-40P-201ENST00000410833 ECM2O94769 699 aaPredicted RBP3.94□□□□□ -1.78
RNU2-40P-201ENST00000410833 LIAT1Q6ZQX7 453 aa3.94□□□□□ -1.78
RNU2-40P-201ENST00000410833 RBM33Q96EV2 1170 aaKnown RBP3.94□□□□□ -1.78
RNU2-40P-201ENST00000410833 NCKAP5LQ9HCH0 1330 aa3.94□□□□□ -1.78
RNU2-40P-201ENST00000410833 ZPR1O75312 459 aa3.93□□□□□ -1.78
RNU2-40P-201ENST00000410833 CRIPAKQ8N1N5 446 aa3.93□□□□□ -1.78
RNU2-40P-201ENST00000410833 TERTO14746 1132 aaKnown RBP3.92□□□□□ -1.78
RNU2-40P-201ENST00000410833 PPEF1O14829 653 aaPredicted RBP3.92□□□□□ -1.78
RNU2-40P-201ENST00000410833 PDE4AP27815 886 aa3.92□□□□□ -1.78
RNU2-40P-201ENST00000410833 EPAS1Q99814 870 aa3.92□□□□□ -1.78
RNU2-40P-201ENST00000410833 EMILIN3Q9NT22 766 aa3.92□□□□□ -1.78
RNU2-40P-201ENST00000410833 AXIN1O15169 862 aa3.91□□□□□ -1.78
RNU2-40P-201ENST00000410833 C3orf80F5H4A9 247 aa3.9□□□□□ -1.79
RNU2-40P-201ENST00000410833 LORP23490 312 aaPredicted RBP3.9□□□□□ -1.79
RNU2-40P-201ENST00000410833 ANKLE1Q8NAG6 615 aa3.9□□□□□ -1.79
RNU2-40P-201ENST00000410833 LARP6Q9BRS8 491 aaKnown RBP3.9□□□□□ -1.79
RNU2-40P-201ENST00000410833 AVPP01185 164 aa3.89□□□□□ -1.79
RNU2-40P-201ENST00000410833 SNRPBP14678 240 aaKnown RBP3.89□□□□□ -1.79
RNU2-40P-201ENST00000410833 FOXC1Q12948 553 aa3.89□□□□□ -1.79
RNU2-40P-201ENST00000410833 ZSCAN1Q8NBB4 408 aa3.89□□□□□ -1.79
RNU2-40P-201ENST00000410833 DDX27Q96GQ7 796 aaKnown RBP3.89□□□□□ -1.79
RNU2-40P-201ENST00000410833 PKD2L1Q9P0L9 805 aa3.89□□□□□ -1.79
RNU2-40P-201ENST00000410833 FAM198AQ9UFP1 575 aa3.89□□□□□ -1.79
RNU2-40P-201ENST00000410833 TLL1O43897 1013 aa3.88□□□□□ -1.79
RNU2-40P-201ENST00000410833 TSR1Q2NL82 804 aaKnown RBP3.88□□□□□ -1.79
RNU2-40P-201ENST00000410833 TATDN2Q93075 761 aa3.88□□□□□ -1.79
RNU2-40P-201ENST00000410833 CDCA7LQ96GN5 454 aa3.88□□□□□ -1.79
RNU2-40P-201ENST00000410833 PNMA3Q9UL41 463 aa3.88□□□□□ -1.79
RNU2-40P-201ENST00000410833 S1PR4O95977 384 aa3.87□□□□□ -1.79
RNU2-40P-201ENST00000410833 HDGFP51858 240 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms