RNA–Protein interactions for RNA: ENST00000410720.1

RNU6-248P-201, Transcript of RNA, U6 small nuclear 248, pseudogene, humanhuman

BASIC

Gene RNU6-248P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-248P-201ENST00000410720 MAP3K7O43318 606 aa9.23□□□□□ -0.93
RNU6-248P-201ENST00000410720 MLLT3P42568 568 aaPredicted RBP9.23□□□□□ -0.93
RNU6-248P-201ENST00000410720 LSM11P83369 360 aaKnown RBP eCLIP9.23□□□□□ -0.93
RNU6-248P-201ENST00000410720 FBXW7Q969H0 707 aa9.23□□□□□ -0.93
RNU6-248P-201ENST00000410720 BCL2L12Q9HB09 334 aa9.23□□□□□ -0.93
RNU6-248P-201ENST00000410720 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
RNU6-248P-201ENST00000410720 SLC24A1O60721 1099 aa9.2□□□□□ -0.94
RNU6-248P-201ENST00000410720 EN1Q05925 392 aaPredicted RBP9.19□□□□□ -0.94
RNU6-248P-201ENST00000410720 TSR1Q2NL82 804 aaKnown RBP9.19□□□□□ -0.94
RNU6-248P-201ENST00000410720 C6orf132Q5T0Z8 1188 aa9.18□□□□□ -0.94
RNU6-248P-201ENST00000410720 OSBPP22059 807 aa9.17□□□□□ -0.94
RNU6-248P-201ENST00000410720 PRIM1P49642 420 aaKnown RBP9.17□□□□□ -0.94
RNU6-248P-201ENST00000410720 COL9A1P20849 921 aa9.16□□□□□ -0.94
RNU6-248P-201ENST00000410720 ADGRD1Q6QNK2 874 aa9.16□□□□□ -0.94
RNU6-248P-201ENST00000410720 RNF166Q96A37 237 aaPredicted RBP9.16□□□□□ -0.94
RNU6-248P-201ENST00000410720 PPP1R3GB7ZBB8 358 aa9.15□□□□□ -0.94
RNU6-248P-201ENST00000410720 MYT1LQ9UL68 1186 aa9.15□□□□□ -0.94
RNU6-248P-201ENST00000410720 STAC3Q96MF2 364 aa9.14□□□□□ -0.95
RNU6-248P-201ENST00000410720 PROX2Q3B8N5 592 aa9.13□□□□□ -0.95
RNU6-248P-201ENST00000410720 CDHR5Q9HBB8 845 aa9.13□□□□□ -0.95
RNU6-248P-201ENST00000410720 TESPA1A2RU30 521 aaPredicted RBP9.12□□□□□ -0.95
RNU6-248P-201ENST00000410720 SMYD5Q6GMV2 418 aa9.12□□□□□ -0.95
RNU6-248P-201ENST00000410720 ZBED2Q9BTP6 218 aa9.12□□□□□ -0.95
RNU6-248P-201ENST00000410720 NUTM2FA1L443 756 aa9.11□□□□□ -0.95
RNU6-248P-201ENST00000410720 VPS9D1Q9Y2B5 631 aa9.11□□□□□ -0.95
RNU6-248P-201ENST00000410720 TK2O00142 265 aa9.1□□□□□ -0.95
RNU6-248P-201ENST00000410720 RBM26Q5T8P6 1007 aaKnown RBP9.09□□□□□ -0.95
RNU6-248P-201ENST00000410720 TULP1O00294 542 aaPredicted RBP9.08□□□□□ -0.96
RNU6-248P-201ENST00000410720 KIAA1468Q9P260 1216 aa9.06□□□□□ -0.96
RNU6-248P-201ENST00000410720 GOLGA8CPA6NN73 597 aa9.05□□□□□ -0.96
RNU6-248P-201ENST00000410720 TRIM6-TRIM34B2RNG4 842 aa9.05□□□□□ -0.96
RNU6-248P-201ENST00000410720 HRO43593 1189 aa9.05□□□□□ -0.96
RNU6-248P-201ENST00000410720 MRPL50Q8N5N7 158 aaKnown RBP9.05□□□□□ -0.96
RNU6-248P-201ENST00000410720 CERKQ8TCT0 537 aa9.05□□□□□ -0.96
RNU6-248P-201ENST00000410720 CDCA7LQ96GN5 454 aa9.05□□□□□ -0.96
RNU6-248P-201ENST00000410720 SLC4A5Q9BY07 1137 aa9.05□□□□□ -0.96
RNU6-248P-201ENST00000410720 NBPF3Q9H094 633 aa9.05□□□□□ -0.96
RNU6-248P-201ENST00000410720 PRSS12P56730 875 aa9.04□□□□□ -0.96
RNU6-248P-201ENST00000410720 SEPT9Q9UHD8 586 aaPredicted RBP9.03□□□□□ -0.96
RNU6-248P-201ENST00000410720 RABGEF1Q9UJ41 708 aa9.03□□□□□ -0.96
RNU6-248P-201ENST00000410720 TSKSQ9UJT2 592 aa9.03□□□□□ -0.96
RNU6-248P-201ENST00000410720 PADI6Q6TGC4 694 aa9.02□□□□□ -0.97
RNU6-248P-201ENST00000410720 PACS2Q86VP3 889 aa9.02□□□□□ -0.97
RNU6-248P-201ENST00000410720 PTGDRQ13258 359 aa9.01□□□□□ -0.97
RNU6-248P-201ENST00000410720 GPIHBP1Q8IV16 184 aa9.01□□□□□ -0.97
RNU6-248P-201ENST00000410720 KCTD12Q96CX2 325 aaKnown RBP9.01□□□□□ -0.97
RNU6-248P-201ENST00000410720 NPDC1Q9NQX5 325 aaPredicted RBP9.01□□□□□ -0.97
RNU6-248P-201ENST00000410720 BHMG1C9JSJ3 638 aaPredicted RBP9□□□□□ -0.97
RNU6-248P-201ENST00000410720 SMAPO00193 183 aa9□□□□□ -0.97
RNU6-248P-201ENST00000410720 FCHSD2O94868 740 aa9□□□□□ -0.97
RNU6-248P-201ENST00000410720 FAM198AQ9UFP1 575 aa8.99□□□□□ -0.97
RNU6-248P-201ENST00000410720 PNMA3Q9UL41 463 aa8.99□□□□□ -0.97
RNU6-248P-201ENST00000410720 NBPF26B4DH59 902 aa8.97□□□□□ -0.97
RNU6-248P-201ENST00000410720 ONECUT3O60422 494 aaPredicted RBP8.97□□□□□ -0.97
RNU6-248P-201ENST00000410720 NUDT18Q6ZVK8 323 aa8.97□□□□□ -0.97
RNU6-248P-201ENST00000410720 WNT2BQ93097 391 aa8.97□□□□□ -0.97
RNU6-248P-201ENST00000410720 TATDN2Q93075 761 aa8.96□□□□□ -0.98
RNU6-248P-201ENST00000410720 FAM161AQ3B820 660 aa8.95□□□□□ -0.98
RNU6-248P-201ENST00000410720 RBM27Q9P2N5 1060 aaKnown RBP8.95□□□□□ -0.98
RNU6-248P-201ENST00000410720 C3orf80F5H4A9 247 aa8.94□□□□□ -0.98
RNU6-248P-201ENST00000410720 PTPN5P54829 565 aa8.94□□□□□ -0.98
RNU6-248P-201ENST00000410720 FAM98CQ17RN3 349 aaKnown RBP8.94□□□□□ -0.98
RNU6-248P-201ENST00000410720 LMOD2Q6P5Q4 547 aa8.94□□□□□ -0.98
RNU6-248P-201ENST00000410720 ANKK1Q8NFD2 765 aa8.94□□□□□ -0.98
RNU6-248P-201ENST00000410720 HIC1Q14526 733 aa8.93□□□□□ -0.98
RNU6-248P-201ENST00000410720 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.98
RNU6-248P-201ENST00000410720 LAPTM4BQ86VI4 370 aa8.93□□□□□ -0.98
RNU6-248P-201ENST00000410720 ZFRQ96KR1 1074 aaKnown RBP8.93□□□□□ -0.98
RNU6-248P-201ENST00000410720 GNPATO15228 680 aa8.92□□□□□ -0.98
RNU6-248P-201ENST00000410720 RNF40O75150 1001 aa8.92□□□□□ -0.98
RNU6-248P-201ENST00000410720 FECHP22830 423 aa8.92□□□□□ -0.98
RNU6-248P-201ENST00000410720 BCAMP50895 628 aa8.91□□□□□ -0.98
RNU6-248P-201ENST00000410720 BCANQ96GW7 911 aa8.91□□□□□ -0.98
RNU6-248P-201ENST00000410720 GPR37O15354 613 aa8.9□□□□□ -0.98
RNU6-248P-201ENST00000410720 TTC13Q8NBP0 860 aa8.9□□□□□ -0.98
RNU6-248P-201ENST00000410720 THSD4Q6ZMP0 1018 aa8.89□□□□□ -0.99
RNU6-248P-201ENST00000410720 SAMD7Q7Z3H4 446 aa8.89□□□□□ -0.99
RNU6-248P-201ENST00000410720 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
RNU6-248P-201ENST00000410720 HCSTQ9UBK5 93 aa8.89□□□□□ -0.99
RNU6-248P-201ENST00000410720 HDGFP51858 240 aaKnown RBP8.88□□□□□ -0.99
RNU6-248P-201ENST00000410720 RBM46Q8TBY0 533 aaKnown RBP8.88□□□□□ -0.99
RNU6-248P-201ENST00000410720 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.88□□□□□ -0.99
RNU6-248P-201ENST00000410720 ADGRG1Q9Y653 693 aa8.88□□□□□ -0.99
RNU6-248P-201ENST00000410720 SOWAHBA6NEL2 793 aa8.86□□□□□ -0.99
RNU6-248P-201ENST00000410720 EYA1Q99502 592 aa8.85□□□□□ -0.99
RNU6-248P-201ENST00000410720 HPS5Q9UPZ3 1129 aa8.85□□□□□ -0.99
RNU6-248P-201ENST00000410720 SWT1Q5T5J6 900 aaKnown RBP8.84□□□□□ -0.99
RNU6-248P-201ENST00000410720 RCCD1A6NED2 376 aa8.83□□□□□ -1
RNU6-248P-201ENST00000410720 OATP04181 439 aa8.83□□□□□ -1
RNU6-248P-201ENST00000410720 DNAJB2P25686 324 aa8.83□□□□□ -1
RNU6-248P-201ENST00000410720 KRI1Q8N9T8 703 aaKnown RBP8.83□□□□□ -1
RNU6-248P-201ENST00000410720 SLC4A3P48751 1232 aa8.82□□□□□ -1
RNU6-248P-201ENST00000410720 PPP4CP60510 307 aa8.82□□□□□ -1
RNU6-248P-201ENST00000410720 METTL3Q86U44 580 aaKnown RBP8.82□□□□□ -1
RNU6-248P-201ENST00000410720 ZC3H15Q8WU90 426 aaKnown RBP8.82□□□□□ -1
RNU6-248P-201ENST00000410720 NLRP7Q8WX94 980 aa8.82□□□□□ -1
RNU6-248P-201ENST00000410720 WBP1LQ9NX94 342 aa8.82□□□□□ -1
RNU6-248P-201ENST00000410720 PLA2G2EQ9NZK7 142 aa8.82□□□□□ -1
RNU6-248P-201ENST00000410720 MAP2K5Q13163 448 aa8.81□□□□□ -1
RNU6-248P-201ENST00000410720 PXYLP1Q8TE99 480 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms