RNA–Protein interactions for RNA: ENST00000410662.1

RN7SKP235-201, Transcript of RNA, 7SK small nuclear pseudogene 235, humanhuman

BASIC

Gene RN7SKP235, Length 305 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP235-201ENST00000410662 SCUBE2Q9NQ36 999 aa7.65□□□□□ -1.18
RN7SKP235-201ENST00000410662 FCHSD2O94868 740 aa7.64□□□□□ -1.19
RN7SKP235-201ENST00000410662 SLAIN1Q8ND83 568 aa7.64□□□□□ -1.19
RN7SKP235-201ENST00000410662 ZSWIM6Q9HCJ5 1215 aa7.64□□□□□ -1.19
RN7SKP235-201ENST00000410662 MINK1Q8N4C8 1332 aaPredicted RBP7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 GNPATO15228 680 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 EN1Q05925 392 aaPredicted RBP7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 MAP2K5Q13163 448 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 PTGDRQ13258 359 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 NEUROD2Q15784 382 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 LAMC3Q9Y6N6 1575 aa7.63□□□□□ -1.19
RN7SKP235-201ENST00000410662 RIMBP2O15034 1052 aa7.62□□□□□ -1.19
RN7SKP235-201ENST00000410662 HOXB3P14651 431 aaPredicted RBP7.62□□□□□ -1.19
RN7SKP235-201ENST00000410662 JPH4Q96JJ6 628 aa7.62□□□□□ -1.19
RN7SKP235-201ENST00000410662 PCDHGA10Q9Y5H3 936 aa7.62□□□□□ -1.19
RN7SKP235-201ENST00000410662 CADPSQ9ULU8 1353 aa7.61□□□□□ -1.19
RN7SKP235-201ENST00000410662 TYW1BQ6NUM6 668 aa7.61□□□□□ -1.19
RN7SKP235-201ENST00000410662 FBXW7Q969H0 707 aa7.61□□□□□ -1.19
RN7SKP235-201ENST00000410662 PRDM2Q13029 1718 aa7.61□□□□□ -1.19
RN7SKP235-201ENST00000410662 TRIM66O15016 1216 aa7.6□□□□□ -1.19
RN7SKP235-201ENST00000410662 IRF6O14896 467 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 FOSBP53539 338 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 GPR153Q6NV75 609 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 CFTRP13569 1480 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 KIF21AQ7Z4S6 1674 aa7.59□□□□□ -1.19
RN7SKP235-201ENST00000410662 MAP3K7O43318 606 aa7.58□□□□□ -1.2
RN7SKP235-201ENST00000410662 ARSIQ5FYB1 569 aa7.58□□□□□ -1.2
RN7SKP235-201ENST00000410662 CCDC102AQ96A19 550 aa7.58□□□□□ -1.2
RN7SKP235-201ENST00000410662 NPDC1Q9NQX5 325 aaPredicted RBP7.58□□□□□ -1.2
RN7SKP235-201ENST00000410662 NUDT7P0C024 238 aa7.57□□□□□ -1.2
RN7SKP235-201ENST00000410662 FECHP22830 423 aa7.57□□□□□ -1.2
RN7SKP235-201ENST00000410662 PDE4DQ08499 809 aa7.57□□□□□ -1.2
RN7SKP235-201ENST00000410662 CDHR5Q9HBB8 845 aa7.57□□□□□ -1.2
RN7SKP235-201ENST00000410662 AMHR2Q16671 573 aa7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 TSR1Q2NL82 804 aaKnown RBP7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 ZNF710Q8N1W2 664 aa7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 KHSRPQ92945 711 aaKnown RBP eCLIP7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 ZDHHC16Q969W1 377 aa7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 RBM33Q96EV2 1170 aaKnown RBP7.56□□□□□ -1.2
RN7SKP235-201ENST00000410662 PDS5BQ9NTI5 1447 aa7.55□□□□□ -1.2
RN7SKP235-201ENST00000410662 SNPHO15079 494 aa7.55□□□□□ -1.2
RN7SKP235-201ENST00000410662 ZNF454Q8N9F8 522 aa7.55□□□□□ -1.2
RN7SKP235-201ENST00000410662 DAXXQ9UER7 740 aaPredicted RBP7.55□□□□□ -1.2
RN7SKP235-201ENST00000410662 CERKQ8TCT0 537 aa7.54□□□□□ -1.2
RN7SKP235-201ENST00000410662 KDM4CQ9H3R0 1056 aa7.54□□□□□ -1.2
RN7SKP235-201ENST00000410662 GPBP1L1Q9HC44 474 aaPredicted RBP7.54□□□□□ -1.2
RN7SKP235-201ENST00000410662 ERCC6Q03468 1493 aa7.54□□□□□ -1.2
RN7SKP235-201ENST00000410662 PSDA5PKW4 1024 aaPredicted RBP7.53□□□□□ -1.2
RN7SKP235-201ENST00000410662 C6orf132Q5T0Z8 1188 aa7.53□□□□□ -1.2
RN7SKP235-201ENST00000410662 GTF3C3Q9Y5Q9 886 aa7.53□□□□□ -1.2
RN7SKP235-201ENST00000410662 FANCD2Q9BXW9 1451 aa7.53□□□□□ -1.2
RN7SKP235-201ENST00000410662 LHX6Q9UPM6 363 aa7.52□□□□□ -1.21
RN7SKP235-201ENST00000410662 HOXB1P14653 301 aaPredicted RBP7.51□□□□□ -1.21
RN7SKP235-201ENST00000410662 OTUD5Q96G74 571 aa7.51□□□□□ -1.21
RN7SKP235-201ENST00000410662 ADAM33Q9BZ11 813 aa7.51□□□□□ -1.21
RN7SKP235-201ENST00000410662 RBM27Q9P2N5 1060 aaKnown RBP7.51□□□□□ -1.21
RN7SKP235-201ENST00000410662 THOC2Q8NI27 1593 aaKnown RBP7.5□□□□□ -1.21
RN7SKP235-201ENST00000410662 CEP164Q9UPV0 1460 aa7.5□□□□□ -1.21
RN7SKP235-201ENST00000410662 PPP4R3BQ5MIZ7 849 aa7.5□□□□□ -1.21
RN7SKP235-201ENST00000410662 PARP9Q8IXQ6 854 aa7.49□□□□□ -1.21
RN7SKP235-201ENST00000410662 TTC13Q8NBP0 860 aa7.48□□□□□ -1.21
RN7SKP235-201ENST00000410662 BCL2L12Q9HB09 334 aa7.48□□□□□ -1.21
RN7SKP235-201ENST00000410662 PADI6Q6TGC4 694 aa7.47□□□□□ -1.21
RN7SKP235-201ENST00000410662 MRC2Q9UBG0 1479 aa7.47□□□□□ -1.21
RN7SKP235-201ENST00000410662 OATP04181 439 aa7.46□□□□□ -1.22
RN7SKP235-201ENST00000410662 PRSS12P56730 875 aa7.46□□□□□ -1.22
RN7SKP235-201ENST00000410662 DDRGK1Q96HY6 314 aa7.46□□□□□ -1.22
RN7SKP235-201ENST00000410662 URB2Q14146 1524 aaKnown RBP7.46□□□□□ -1.22
RN7SKP235-201ENST00000410662 TTLL12Q14166 644 aaPredicted RBP7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 LHX8Q68G74 356 aa7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 METTL3Q86U44 580 aaKnown RBP7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 IL27Q8NEV9 243 aa7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 TMUB1Q9BVT8 246 aa7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 WDR62O43379 1518 aa7.45□□□□□ -1.22
RN7SKP235-201ENST00000410662 PPP1R3GB7ZBB8 358 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 PTPREP23469 700 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 CLCN1P35523 988 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 GIGYF2Q6Y7W6 1299 aaKnown RBP7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 CDCA7LQ96GN5 454 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 PHOX2BQ99453 314 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 FAM117AQ9C073 453 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 ADGRG1Q9Y653 693 aa7.44□□□□□ -1.22
RN7SKP235-201ENST00000410662 TOPBP1Q92547 1522 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 ABCC8Q09428 1581 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 DNMBPQ6XZF7 1577 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 COL9A1P20849 921 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 ERICH6Q7L0X2 663 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 PXYLP1Q8TE99 480 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 GPCPD1Q9NPB8 672 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 CUX2O14529 1486 aa7.43□□□□□ -1.22
RN7SKP235-201ENST00000410662 CUX1P39880 1505 aa7.42□□□□□ -1.22
RN7SKP235-201ENST00000410662 REPIN1Q9BWE0 567 aaKnown RBP7.42□□□□□ -1.22
RN7SKP235-201ENST00000410662 PLEKHG3A1L390 1219 aa7.41□□□□□ -1.22
RN7SKP235-201ENST00000410662 MS4A1P11836 297 aa7.41□□□□□ -1.22
RN7SKP235-201ENST00000410662 FAM161AQ3B820 660 aa7.41□□□□□ -1.22
RN7SKP235-201ENST00000410662 MDM2Q00987 491 aaPredicted RBP7.4□□□□□ -1.22
RN7SKP235-201ENST00000410662 RBM46Q8TBY0 533 aaKnown RBP7.4□□□□□ -1.22
RN7SKP235-201ENST00000410662 BIVM-ERCC5R4GMW8 1640 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 SYNJ1O43426 1573 aa7.39□□□□□ -1.23
RN7SKP235-201ENST00000410662 GOPCQ9HD26 462 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms