RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 RRBP1Q9P2E9 1410 aaKnown RBP13.22□□□□□ -0.29
POLR1A-203ENST00000409681 CCDC141Q6ZP82 1450 aa13.22□□□□□ -0.29
POLR1A-203ENST00000409681 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
POLR1A-203ENST00000409681 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
POLR1A-203ENST00000409681 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
POLR1A-203ENST00000409681 NUTM2FA1L443 756 aa13.2□□□□□ -0.3
POLR1A-203ENST00000409681 AMPHP49418 695 aa13.2□□□□□ -0.3
POLR1A-203ENST00000409681 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
POLR1A-203ENST00000409681 RALBP1Q15311 655 aa13.2□□□□□ -0.3
POLR1A-203ENST00000409681 CHMP4BQ9H444 224 aaKnown RBP13.2□□□□□ -0.3
POLR1A-203ENST00000409681 ASXL2Q76L83 1435 aa13.19□□□□□ -0.3
POLR1A-203ENST00000409681 FANCAO15360 1455 aa13.18□□□□□ -0.3
POLR1A-203ENST00000409681 DAPK1P53355 1430 aa13.18□□□□□ -0.3
POLR1A-203ENST00000409681 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.18□□□□□ -0.3
POLR1A-203ENST00000409681 PROSER2Q86WR7 435 aaPredicted RBP13.18□□□□□ -0.3
POLR1A-203ENST00000409681 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
POLR1A-203ENST00000409681 PSME1Q06323 249 aa13.18□□□□□ -0.3
POLR1A-203ENST00000409681 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
POLR1A-203ENST00000409681 MS4A1P11836 297 aa13.17□□□□□ -0.3
POLR1A-203ENST00000409681 NUP160Q12769 1436 aa13.17□□□□□ -0.3
POLR1A-203ENST00000409681 RPGRIP1LQ68CZ1 1315 aa13.17□□□□□ -0.3
POLR1A-203ENST00000409681 PCF11O94913 1555 aaKnown RBP13.16□□□□□ -0.3
POLR1A-203ENST00000409681 COG3Q96JB2 828 aa13.16□□□□□ -0.3
POLR1A-203ENST00000409681 MAP3K1Q13233 1512 aa13.16□□□□□ -0.3
POLR1A-203ENST00000409681 UGGT2Q9NYU1 1516 aa13.16□□□□□ -0.3
POLR1A-203ENST00000409681 CENPJQ9HC77 1338 aaPredicted RBP13.15□□□□□ -0.3
POLR1A-203ENST00000409681 UPF2Q9HAU5 1272 aaKnown RBP13.15□□□□□ -0.3
POLR1A-203ENST00000409681 WDR7Q9Y4E6 1490 aa13.15□□□□□ -0.3
POLR1A-203ENST00000409681 EVA1CP58658 441 aa13.15□□□□□ -0.3
POLR1A-203ENST00000409681 ROCK1Q13464 1354 aa13.15□□□□□ -0.3
POLR1A-203ENST00000409681 MIER1Q8N108 512 aa13.14□□□□□ -0.31
POLR1A-203ENST00000409681 DMRT2Q9Y5R5 561 aa13.14□□□□□ -0.31
POLR1A-203ENST00000409681 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.14□□□□□ -0.31
POLR1A-203ENST00000409681 U2AF1L5P0DN76 240 aaPredicted RBP13.13□□□□□ -0.31
POLR1A-203ENST00000409681 U2AF1Q01081 240 aaKnown RBP eCLIP13.13□□□□□ -0.314e-6■■■□□ 19.2
POLR1A-203ENST00000409681 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
POLR1A-203ENST00000409681 RAPGEF6Q8TEU7 1601 aa13.13□□□□□ -0.31
POLR1A-203ENST00000409681 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
POLR1A-203ENST00000409681 ST20-MTHFSA0A0A6YYL1 179 aa13.13□□□□□ -0.31
POLR1A-203ENST00000409681 CAMSAP2Q08AD1 1489 aa13.13□□□□□ -0.31
POLR1A-203ENST00000409681 THOC2Q8NI27 1593 aaKnown RBP13.11□□□□□ -0.31
POLR1A-203ENST00000409681 ATP10BO94823 1461 aa13.1□□□□□ -0.31
POLR1A-203ENST00000409681 PLCH2O75038 1416 aa13.1□□□□□ -0.31
POLR1A-203ENST00000409681 LMOD3Q0VAK6 560 aa13.1□□□□□ -0.31
POLR1A-203ENST00000409681 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
POLR1A-203ENST00000409681 CCDC136Q96JN2 1154 aa13.1□□□□□ -0.31
POLR1A-203ENST00000409681 KIAA1107Q9UPP5 1409 aa13.1□□□□□ -0.31
POLR1A-203ENST00000409681 ABCC2Q92887 1545 aa13.09□□□□□ -0.31
POLR1A-203ENST00000409681 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
POLR1A-203ENST00000409681 USP47Q96K76 1375 aa13.09□□□□□ -0.31
POLR1A-203ENST00000409681 ANKRD30BQ9BXX2 1392 aa13.09□□□□□ -0.31
POLR1A-203ENST00000409681 CCER2I3L3R5 266 aa13.07□□□□□ -0.32
POLR1A-203ENST00000409681 FKBP8Q14318 412 aa13.07□□□□□ -0.32
POLR1A-203ENST00000409681 GTF3C3Q9Y5Q9 886 aa13.07□□□□□ -0.32
POLR1A-203ENST00000409681 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
POLR1A-203ENST00000409681 PBRM1Q86U86 1689 aa13.06□□□□□ -0.32
POLR1A-203ENST00000409681 DHX29Q7Z478 1369 aaKnown RBP13.06□□□□□ -0.32
POLR1A-203ENST00000409681 CTTNBP2Q8WZ74 1663 aa13.06□□□□□ -0.32
POLR1A-203ENST00000409681 EIF5BO60841 1220 aaKnown RBP13.05□□□□□ -0.32
POLR1A-203ENST00000409681 ABCA5Q8WWZ7 1642 aa13.04□□□□□ -0.32
POLR1A-203ENST00000409681 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
POLR1A-203ENST00000409681 NLRP13Q86W25 1043 aa13.04□□□□□ -0.32
POLR1A-203ENST00000409681 PANK3Q9H999 370 aa13.04□□□□□ -0.32
POLR1A-203ENST00000409681 TMX4Q9H1E5 349 aaPredicted RBP13.03□□□□□ -0.32
POLR1A-203ENST00000409681 NUP153P49790 1475 aaKnown RBP13.03□□□□□ -0.32
POLR1A-203ENST00000409681 ERBINQ96RT1 1412 aa13.03□□□□□ -0.32
POLR1A-203ENST00000409681 RTL5Q5HYW3 569 aaPredicted RBP13.03□□□□□ -0.32
POLR1A-203ENST00000409681 TMEM132EQ6IEE7 984 aa13.03□□□□□ -0.32
POLR1A-203ENST00000409681 ESCO1Q5FWF5 840 aa13.03□□□□□ -0.32
POLR1A-203ENST00000409681 C1orf141Q5JVX7 400 aa13.03□□□□□ -0.32
POLR1A-203ENST00000409681 CFAP70Q5T0N1 1121 aa13.02□□□□□ -0.32
POLR1A-203ENST00000409681 ABCC5O15440 1437 aa13.02□□□□□ -0.32
POLR1A-203ENST00000409681 PTPN23Q9H3S7 1636 aa13.02□□□□□ -0.33
POLR1A-203ENST00000409681 CEP170Q5SW79 1584 aa13.02□□□□□ -0.33
POLR1A-203ENST00000409681 HDAC5Q9UQL6 1122 aa13.01□□□□□ -0.33
POLR1A-203ENST00000409681 IPO8O15397 1037 aaKnown RBP13.01□□□□□ -0.33
POLR1A-203ENST00000409681 HSP90AA1P07900 732 aaKnown RBP13.01□□□□□ -0.33
POLR1A-203ENST00000409681 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
POLR1A-203ENST00000409681 SLC26A8Q96RN1 970 aa13□□□□□ -0.33
POLR1A-203ENST00000409681 STK31Q9BXU1 1019 aa13□□□□□ -0.33
POLR1A-203ENST00000409681 OS9Q13438 667 aaPredicted RBP13□□□□□ -0.33
POLR1A-203ENST00000409681 ANP32AP39687 249 aaKnown RBP13□□□□□ -0.33
POLR1A-203ENST00000409681 GOLGA2Q08379 1002 aa13□□□□□ -0.33
POLR1A-203ENST00000409681 FRAT1Q92837 279 aaPredicted RBP13□□□□□ -0.33
POLR1A-203ENST00000409681 ABCC10Q5T3U5 1492 aa12.99□□□□□ -0.33
POLR1A-203ENST00000409681 PRAM1Q96QH2 718 aa12.99□□□□□ -0.33
POLR1A-203ENST00000409681 TARBP1Q13395 1621 aaKnown RBP12.98□□□□□ -0.33
POLR1A-203ENST00000409681 ZNF692Q9BU19 519 aaPredicted RBP12.98□□□□□ -0.33
POLR1A-203ENST00000409681 ZNF330Q9Y3S2 320 aaPredicted RBP12.98□□□□□ -0.33
POLR1A-203ENST00000409681 TNRQ92752 1358 aa12.98□□□□□ -0.33
POLR1A-203ENST00000409681 NLRP6P59044 892 aa12.97□□□□□ -0.33
POLR1A-203ENST00000409681 CASC1Q6TDU7 716 aa12.97□□□□□ -0.33
POLR1A-203ENST00000409681 NCOA1Q15788 1441 aa12.96□□□□□ -0.33
POLR1A-203ENST00000409681 A2MP01023 1474 aa12.96□□□□□ -0.33
POLR1A-203ENST00000409681 ITSN2Q9NZM3 1697 aa12.96□□□□□ -0.33
POLR1A-203ENST00000409681 CEBPAP49715 358 aaPredicted RBP12.96□□□□□ -0.33
POLR1A-203ENST00000409681 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.33
POLR1A-203ENST00000409681 MYBBP1AQ9BQG0 1328 aaKnown RBP12.96□□□□□ -0.33
POLR1A-203ENST00000409681 RAPGEF4Q8WZA2 1011 aa12.96□□□□□ -0.34
POLR1A-203ENST00000409681 CABP2Q9NPB3 220 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms