RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 HFM1A2PYH4 1435 aa21.48■■□□□ 1.03
PCDHA13-202ENST00000409494 NGEFQ8N5V2 710 aa21.47■■□□□ 1.03
PCDHA13-202ENST00000409494 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.47■■□□□ 1.03
PCDHA13-202ENST00000409494 CGNL1Q0VF96 1302 aa21.46■■□□□ 1.03
PCDHA13-202ENST00000409494 ST20-MTHFSA0A0A6YYL1 179 aa21.46■■□□□ 1.03
PCDHA13-202ENST00000409494 IQGAP2Q13576 1575 aa21.46■■□□□ 1.03
PCDHA13-202ENST00000409494 NOP58Q9Y2X3 529 aaKnown RBP21.46■■□□□ 1.03
PCDHA13-202ENST00000409494 OS9Q13438 667 aaPredicted RBP21.46■■□□□ 1.03
PCDHA13-202ENST00000409494 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
PCDHA13-202ENST00000409494 ZNF644Q9H582 1327 aaPredicted RBP21.46■■□□□ 1.03
PCDHA13-202ENST00000409494 TSHZ2Q9NRE2 1034 aa21.45■■□□□ 1.02
PCDHA13-202ENST00000409494 AMPHP49418 695 aa21.45■■□□□ 1.02
PCDHA13-202ENST00000409494 USP47Q96K76 1375 aa21.43■■□□□ 1.02
PCDHA13-202ENST00000409494 GOLGA6L22H0YM25 854 aa21.43■■□□□ 1.02
PCDHA13-202ENST00000409494 NCLP19338 710 aaKnown RBP21.43■■□□□ 1.02
PCDHA13-202ENST00000409494 COG3Q96JB2 828 aa21.41■■□□□ 1.02
PCDHA13-202ENST00000409494 MYBBP1AQ9BQG0 1328 aaKnown RBP21.41■■□□□ 1.02
PCDHA13-202ENST00000409494 NUTM2DQ5VT03 806 aaPredicted RBP21.4■■□□□ 1.02
PCDHA13-202ENST00000409494 AFAP1Q8N556 730 aa21.4■■□□□ 1.02
PCDHA13-202ENST00000409494 GRIN2AQ12879 1464 aa21.4■■□□□ 1.02
PCDHA13-202ENST00000409494 STK31Q9BXU1 1019 aa21.4■■□□□ 1.02
PCDHA13-202ENST00000409494 POGZQ7Z3K3 1410 aa21.4■■□□□ 1.02
PCDHA13-202ENST00000409494 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
PCDHA13-202ENST00000409494 SLC52A1Q9NWF4 448 aa21.38■■□□□ 1.01
PCDHA13-202ENST00000409494 C9orf84Q5VXU9 1444 aa21.38■■□□□ 1.01
PCDHA13-202ENST00000409494 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
PCDHA13-202ENST00000409494 GOLGA2Q08379 1002 aa21.37■■□□□ 1.01
PCDHA13-202ENST00000409494 UNC13AQ9UPW8 1703 aa21.36■■□□□ 1.01
PCDHA13-202ENST00000409494 TIAM1Q13009 1591 aa21.36■■□□□ 1.01
PCDHA13-202ENST00000409494 PANK3Q9H999 370 aa21.35■■□□□ 1.01
PCDHA13-202ENST00000409494 SUPT6HQ7KZ85 1726 aaKnown RBP21.33■■□□□ 1.01
PCDHA13-202ENST00000409494 EPRSP07814 1512 aaKnown RBP21.33■■□□□ 1.01
PCDHA13-202ENST00000409494 URB2Q14146 1524 aaKnown RBP21.33■■□□□ 1
PCDHA13-202ENST00000409494 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
PCDHA13-202ENST00000409494 MAP3K1Q13233 1512 aa21.32■■□□□ 1
PCDHA13-202ENST00000409494 THEMISQ8N1K5 641 aaPredicted RBP21.3■■□□□ 1
PCDHA13-202ENST00000409494 RPGRIP1LQ68CZ1 1315 aa21.3■■□□□ 1
PCDHA13-202ENST00000409494 RWDD1Q9H446 243 aaPredicted RBP21.29■■□□□ 1
PCDHA13-202ENST00000409494 ROCK1Q13464 1354 aa21.29■■□□□ 1
PCDHA13-202ENST00000409494 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
PCDHA13-202ENST00000409494 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.29■■□□□ 1
PCDHA13-202ENST00000409494 SCAPERQ9BY12 1400 aa21.29■■□□□ 1
PCDHA13-202ENST00000409494 MINK1Q8N4C8 1332 aaPredicted RBP21.28■■□□□ 1
PCDHA13-202ENST00000409494 RGS3P49796 1198 aa21.28■■□□□ 1
PCDHA13-202ENST00000409494 MCCP23508 829 aa21.27■■□□□ 1
PCDHA13-202ENST00000409494 HMMRO75330 724 aa21.26■□□□□ 0.99
PCDHA13-202ENST00000409494 CCDC9Q9Y3X0 531 aaKnown RBP21.26■□□□□ 0.99
PCDHA13-202ENST00000409494 KIAA1107Q9UPP5 1409 aa21.26■□□□□ 0.99
PCDHA13-202ENST00000409494 KCNJ4P48050 445 aa21.24■□□□□ 0.99
PCDHA13-202ENST00000409494 PMFBP1Q8TBY8 1022 aa21.24■□□□□ 0.99
PCDHA13-202ENST00000409494 ATF3P18847 181 aa21.23■□□□□ 0.99
PCDHA13-202ENST00000409494 DAPK1P53355 1430 aa21.22■□□□□ 0.99
PCDHA13-202ENST00000409494 PRKRIP1Q9H875 184 aaPredicted RBP21.22■□□□□ 0.99
PCDHA13-202ENST00000409494 PSME1Q06323 249 aa21.22■□□□□ 0.99
PCDHA13-202ENST00000409494 TMX4Q9H1E5 349 aaPredicted RBP21.22■□□□□ 0.99
PCDHA13-202ENST00000409494 CCDC141Q6ZP82 1450 aa21.21■□□□□ 0.99
PCDHA13-202ENST00000409494 FGD1P98174 961 aa21.21■□□□□ 0.99
PCDHA13-202ENST00000409494 ANKRD30BQ9BXX2 1392 aa21.2■□□□□ 0.98
PCDHA13-202ENST00000409494 C1orf141Q5JVX7 400 aa21.2■□□□□ 0.98
PCDHA13-202ENST00000409494 SMC4Q9NTJ3 1288 aa21.2■□□□□ 0.98
PCDHA13-202ENST00000409494 CD109Q6YHK3 1445 aa21.2■□□□□ 0.98
PCDHA13-202ENST00000409494 NUTM2FA1L443 756 aa21.2■□□□□ 0.98
PCDHA13-202ENST00000409494 ZRSR1Q15695 479 aaKnown RBP21.19■□□□□ 0.98
PCDHA13-202ENST00000409494 TXNDC2Q86VQ3 553 aa21.18■□□□□ 0.98
PCDHA13-202ENST00000409494 WASHC2AQ641Q2 1341 aa21.18■□□□□ 0.98
PCDHA13-202ENST00000409494 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
PCDHA13-202ENST00000409494 DIAPH1O60610 1272 aaKnown RBP21.17■□□□□ 0.98
PCDHA13-202ENST00000409494 GLIPR1L2Q4G1C9 344 aa21.17■□□□□ 0.98
PCDHA13-202ENST00000409494 E9PSI1 815 aa21.17■□□□□ 0.98
PCDHA13-202ENST00000409494 EVA1CP58658 441 aa21.16■□□□□ 0.98
PCDHA13-202ENST00000409494 DEKP35659 375 aaKnown RBP21.16■□□□□ 0.98
PCDHA13-202ENST00000409494 ITPRIPQ8IWB1 547 aa21.15■□□□□ 0.98
PCDHA13-202ENST00000409494 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
PCDHA13-202ENST00000409494 GPATCH3Q96I76 525 aa21.15■□□□□ 0.98
PCDHA13-202ENST00000409494 KIF14Q15058 1648 aa21.15■□□□□ 0.98
PCDHA13-202ENST00000409494 LTV1Q96GA3 475 aaPredicted RBP21.14■□□□□ 0.97
PCDHA13-202ENST00000409494 CDK11BP21127 795 aaKnown RBP21.14■□□□□ 0.97
PCDHA13-202ENST00000409494 TEFQ10587 303 aa21.14■□□□□ 0.97
PCDHA13-202ENST00000409494 CCDC7Q96M83 1385 aa21.13■□□□□ 0.97
PCDHA13-202ENST00000409494 TCERG1O14776 1098 aaKnown RBP21.13■□□□□ 0.97
PCDHA13-202ENST00000409494 KIAA1211Q6ZU35 1233 aa21.12■□□□□ 0.97
PCDHA13-202ENST00000409494 GPRASP1Q5JY77 1395 aa21.12■□□□□ 0.97
PCDHA13-202ENST00000409494 PLB1Q6P1J6 1458 aa21.11■□□□□ 0.97
PCDHA13-202ENST00000409494 CDK13Q14004 1512 aaKnown RBP21.1■□□□□ 0.97
PCDHA13-202ENST00000409494 ANKLE2Q86XL3 938 aa21.09■□□□□ 0.97
PCDHA13-202ENST00000409494 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
PCDHA13-202ENST00000409494 RAPGEF3O95398 923 aa21.09■□□□□ 0.97
PCDHA13-202ENST00000409494 TRIM44Q96DX7 344 aaPredicted RBP21.09■□□□□ 0.97
PCDHA13-202ENST00000409494 ZNF692Q9BU19 519 aaPredicted RBP21.09■□□□□ 0.97
PCDHA13-202ENST00000409494 HSP90AB1P08238 724 aaKnown RBP21.08■□□□□ 0.96
PCDHA13-202ENST00000409494 CCDC146Q8IYE0 955 aa21.07■□□□□ 0.96
PCDHA13-202ENST00000409494 TAF7LQ5H9L4 462 aa21.07■□□□□ 0.96
PCDHA13-202ENST00000409494 HSCBQ8IWL3 235 aa21.07■□□□□ 0.96
PCDHA13-202ENST00000409494 ZNF330Q9Y3S2 320 aaPredicted RBP21.06■□□□□ 0.96
PCDHA13-202ENST00000409494 PCF11O94913 1555 aaKnown RBP21.06■□□□□ 0.96
PCDHA13-202ENST00000409494 ADGRL1O94910 1474 aa21.06■□□□□ 0.96
PCDHA13-202ENST00000409494 CFAP70Q5T0N1 1121 aa21.06■□□□□ 0.96
PCDHA13-202ENST00000409494 ZBED9Q6R2W3 1325 aa21.05■□□□□ 0.96
PCDHA13-202ENST00000409494 CNTLNQ9NXG0 1405 aa21.05■□□□□ 0.96
PCDHA13-202ENST00000409494 ARHGEF11O15085 1522 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms