RNA–Protein interactions for RNA: ENST00000409168.7

SHISA6-202, Transcript of shisa family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA6, Length 7,262 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA6-202ENST00000409168 NECTIN2Q92692 538 aa20.1■□□□□ 0.81
SHISA6-202ENST00000409168 PLEKHD1A6NEE1 506 aa20.09■□□□□ 0.81
SHISA6-202ENST00000409168 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
SHISA6-202ENST00000409168 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.81
SHISA6-202ENST00000409168 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.09■□□□□ 0.81
SHISA6-202ENST00000409168 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.81
SHISA6-202ENST00000409168 DCAF11Q8TEB1 546 aa20.08■□□□□ 0.81
SHISA6-202ENST00000409168 GGT6Q6P531 493 aa20.08■□□□□ 0.8
SHISA6-202ENST00000409168 HSP90AB2PQ58FF8 381 aa20.08■□□□□ 0.8
SHISA6-202ENST00000409168 CCDC146Q8IYE0 955 aa20.07■□□□□ 0.8
SHISA6-202ENST00000409168 MAP7D2Q96T17 732 aa20.07■□□□□ 0.8
SHISA6-202ENST00000409168 GOLGA6L3A6NEY3 463 aa20.07■□□□□ 0.8
SHISA6-202ENST00000409168 FAM184AQ8NB25 1140 aa20.07■□□□□ 0.8
SHISA6-202ENST00000409168 SIN3AQ96ST3 1273 aa20.06■□□□□ 0.8
SHISA6-202ENST00000409168 KIF16BQ96L93 1317 aa20.06■□□□□ 0.8
SHISA6-202ENST00000409168 EVA1CP58658 441 aa20.05■□□□□ 0.8
SHISA6-202ENST00000409168 STK31Q9BXU1 1019 aa20.04■□□□□ 0.8
SHISA6-202ENST00000409168 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
SHISA6-202ENST00000409168 GOLGA6L19H0YKK7 550 aa20.03■□□□□ 0.8
SHISA6-202ENST00000409168 ANKRD62A6NC57 917 aa20.03■□□□□ 0.8
SHISA6-202ENST00000409168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.02■□□□□ 0.8
SHISA6-202ENST00000409168 CCDC70Q6NSX1 233 aa20.02■□□□□ 0.8
SHISA6-202ENST00000409168 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.8
SHISA6-202ENST00000409168 ELL2O00472 640 aaPredicted RBP20.01■□□□□ 0.79
SHISA6-202ENST00000409168 VPS37DQ86XT2 251 aa20.01■□□□□ 0.79
SHISA6-202ENST00000409168 CFDP1Q9UEE9 299 aaPredicted RBP20.01■□□□□ 0.79
SHISA6-202ENST00000409168 BECN2A8MW95 431 aa20■□□□□ 0.79
SHISA6-202ENST00000409168 NOL10Q9BSC4 688 aaKnown RBP20■□□□□ 0.79
SHISA6-202ENST00000409168 R3HCC1Q9Y3T6 440 aaKnown RBP20■□□□□ 0.79
SHISA6-202ENST00000409168 ZNF428Q96B54 188 aa20■□□□□ 0.79
SHISA6-202ENST00000409168 TPM1P09493 284 aa19.99■□□□□ 0.79
SHISA6-202ENST00000409168 HOMER1Q86YM7 354 aa19.99■□□□□ 0.79
SHISA6-202ENST00000409168 SMC4Q9NTJ3 1288 aa19.98■□□□□ 0.79
SHISA6-202ENST00000409168 IKQ13123 557 aaPredicted RBP19.97■□□□□ 0.79
SHISA6-202ENST00000409168 HDGFL2Q7Z4V5 671 aaPredicted RBP19.96■□□□□ 0.79
SHISA6-202ENST00000409168 CCAR1Q8IX12 1150 aaKnown RBP19.96■□□□□ 0.79
SHISA6-202ENST00000409168 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
SHISA6-202ENST00000409168 HSP90AA2PQ14568 343 aaPredicted RBP19.95■□□□□ 0.78
SHISA6-202ENST00000409168 TMF1P82094 1093 aa19.94■□□□□ 0.78
SHISA6-202ENST00000409168 RUFY1Q96T51 708 aa19.94■□□□□ 0.78
SHISA6-202ENST00000409168 SYNE3Q6ZMZ3 975 aa19.94■□□□□ 0.78
SHISA6-202ENST00000409168 SPAG9O60271 1321 aaKnown RBP19.94■□□□□ 0.78
SHISA6-202ENST00000409168 STK11IPQ8N1F8 1099 aa19.94■□□□□ 0.78
SHISA6-202ENST00000409168 IPO8O15397 1037 aaKnown RBP19.93■□□□□ 0.78
SHISA6-202ENST00000409168 DCAF8L1A6NGE4 600 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 FAM177BA6PVY3 158 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 NFXL1Q6ZNB6 911 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 AMPHP49418 695 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 NGDNQ8NEJ9 315 aaKnown RBP19.93■□□□□ 0.78
SHISA6-202ENST00000409168 EIF2S2P20042 333 aaKnown RBP19.93■□□□□ 0.78
SHISA6-202ENST00000409168 AMOTL1Q8IY63 956 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 CSPP1Q1MSJ5 1256 aa19.92■□□□□ 0.78
SHISA6-202ENST00000409168 RRP7AQ9Y3A4 280 aaKnown RBP19.92■□□□□ 0.78
SHISA6-202ENST00000409168 NEFHP12036 1026 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 EPS15P42566 896 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 CHMP4CQ96CF2 233 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 FOXD1Q16676 465 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 HSP90AB3PQ58FF7 597 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 PLIN1O60240 522 aa19.9■□□□□ 0.78
SHISA6-202ENST00000409168 CHMP4BP1P59074 171 aa19.9■□□□□ 0.78
SHISA6-202ENST00000409168 CCDC27Q2M243 656 aa19.9■□□□□ 0.78
SHISA6-202ENST00000409168 IPO7O95373 1038 aaKnown RBP19.89■□□□□ 0.77
SHISA6-202ENST00000409168 TRIM29Q14134 588 aa19.89■□□□□ 0.77
SHISA6-202ENST00000409168 GPS2Q13227 327 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 TTC16Q8NEE8 873 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 BCL2L13Q9BXK5 485 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 MAPK8IP2Q13387 824 aaPredicted RBP19.88■□□□□ 0.77
SHISA6-202ENST00000409168 PDILTQ8N807 584 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 PLCD3Q8N3E9 789 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 FAM13BQ9NYF5 915 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 RWDD1Q9H446 243 aaPredicted RBP19.87■□□□□ 0.77
SHISA6-202ENST00000409168 TCERG1O14776 1098 aaKnown RBP19.87■□□□□ 0.77
SHISA6-202ENST00000409168 ANO2Q9NQ90 1003 aa19.84■□□□□ 0.77
SHISA6-202ENST00000409168 MYCNP04198 464 aaPredicted RBP19.84■□□□□ 0.77
SHISA6-202ENST00000409168 LMOD3Q0VAK6 560 aa19.84■□□□□ 0.77
SHISA6-202ENST00000409168 CAGE1Q8TC20 777 aa19.84■□□□□ 0.77
SHISA6-202ENST00000409168 HDGFP51858 240 aaKnown RBP19.84■□□□□ 0.77
SHISA6-202ENST00000409168 PSMD1Q99460 953 aa19.84■□□□□ 0.77
SHISA6-202ENST00000409168 RBM19Q9Y4C8 960 aaKnown RBP19.83■□□□□ 0.76
SHISA6-202ENST00000409168 PHF14O94880 888 aa19.82■□□□□ 0.76
SHISA6-202ENST00000409168 BICD2Q8TD16 824 aa19.81■□□□□ 0.76
SHISA6-202ENST00000409168 BRPF1P55201 1214 aaPredicted RBP19.81■□□□□ 0.76
SHISA6-202ENST00000409168 WWC2Q6AWC2 1192 aa19.81■□□□□ 0.76
SHISA6-202ENST00000409168 DDX49Q9Y6V7 483 aaKnown RBP19.81■□□□□ 0.76
SHISA6-202ENST00000409168 OFD1O75665 1012 aa19.81■□□□□ 0.76
SHISA6-202ENST00000409168 H0YHG0 523 aa19.8■□□□□ 0.76
SHISA6-202ENST00000409168 ANKRD45Q5TZF3 282 aa19.8■□□□□ 0.76
SHISA6-202ENST00000409168 ATP2B2Q01814 1243 aa19.8■□□□□ 0.76
SHISA6-202ENST00000409168 RBM33Q96EV2 1170 aaKnown RBP19.8■□□□□ 0.76
SHISA6-202ENST00000409168 ST18O60284 1047 aa19.8■□□□□ 0.76
SHISA6-202ENST00000409168 CCDC47Q96A33 483 aaKnown RBP19.8■□□□□ 0.76
SHISA6-202ENST00000409168 CPLX1O14810 134 aa19.79■□□□□ 0.76
SHISA6-202ENST00000409168 ATP2B1P20020 1258 aa19.79■□□□□ 0.76
SHISA6-202ENST00000409168 HMMRO75330 724 aa19.78■□□□□ 0.76
SHISA6-202ENST00000409168 CFAP44Q96MT7 982 aa19.77■□□□□ 0.76
SHISA6-202ENST00000409168 ANKRD20A12PQ8NF67 263 aa19.76■□□□□ 0.75
SHISA6-202ENST00000409168 CCDC191Q8NCU4 936 aa19.76■□□□□ 0.75
SHISA6-202ENST00000409168 ENOX2Q16206 610 aaKnown RBP19.76■□□□□ 0.75
SHISA6-202ENST00000409168 TEX35Q5T0J7 233 aa19.75■□□□□ 0.75
SHISA6-202ENST00000409168 VPS37CA5D8V6 355 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms