RNA–Protein interactions for RNA: ENST00000409168.7

SHISA6-202, Transcript of shisa family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA6, Length 7,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA6-202ENST00000409168 NECTIN2Q92692 538 aa20.1■□□□□ 0.81
SHISA6-202ENST00000409168 PLEKHD1A6NEE1 506 aa20.09■□□□□ 0.81
SHISA6-202ENST00000409168 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
SHISA6-202ENST00000409168 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.81
SHISA6-202ENST00000409168 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.09■□□□□ 0.81
SHISA6-202ENST00000409168 CALD1Q05682 793 aaKnown RBP20.08■□□□□ 0.81
SHISA6-202ENST00000409168 DCAF11Q8TEB1 546 aa20.08■□□□□ 0.81
SHISA6-202ENST00000409168 GGT6Q6P531 493 aa20.08■□□□□ 0.8
SHISA6-202ENST00000409168 HSP90AB2PQ58FF8 381 aa20.08■□□□□ 0.8
SHISA6-202ENST00000409168 CCDC146Q8IYE0 955 aa20.07■□□□□ 0.8
SHISA6-202ENST00000409168 MAP7D2Q96T17 732 aa20.07■□□□□ 0.8
SHISA6-202ENST00000409168 GOLGA6L3A6NEY3 463 aa20.07■□□□□ 0.8
SHISA6-202ENST00000409168 FAM184AQ8NB25 1140 aa20.07■□□□□ 0.8
SHISA6-202ENST00000409168 SIN3AQ96ST3 1273 aa20.06■□□□□ 0.8
SHISA6-202ENST00000409168 KIF16BQ96L93 1317 aa20.06■□□□□ 0.8
SHISA6-202ENST00000409168 EVA1CP58658 441 aa20.05■□□□□ 0.8
SHISA6-202ENST00000409168 STK31Q9BXU1 1019 aa20.04■□□□□ 0.8
SHISA6-202ENST00000409168 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
SHISA6-202ENST00000409168 GOLGA6L19H0YKK7 550 aa20.03■□□□□ 0.8
SHISA6-202ENST00000409168 ANKRD62A6NC57 917 aa20.03■□□□□ 0.8
SHISA6-202ENST00000409168 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.02■□□□□ 0.8
SHISA6-202ENST00000409168 CCDC70Q6NSX1 233 aa20.02■□□□□ 0.8
SHISA6-202ENST00000409168 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.8
SHISA6-202ENST00000409168 ELL2O00472 640 aaPredicted RBP20.01■□□□□ 0.79
SHISA6-202ENST00000409168 VPS37DQ86XT2 251 aa20.01■□□□□ 0.79
SHISA6-202ENST00000409168 CFDP1Q9UEE9 299 aaPredicted RBP20.01■□□□□ 0.79
SHISA6-202ENST00000409168 BECN2A8MW95 431 aa20■□□□□ 0.79
SHISA6-202ENST00000409168 NOL10Q9BSC4 688 aaKnown RBP20■□□□□ 0.79
SHISA6-202ENST00000409168 R3HCC1Q9Y3T6 440 aaKnown RBP20■□□□□ 0.79
SHISA6-202ENST00000409168 ZNF428Q96B54 188 aa20■□□□□ 0.79
SHISA6-202ENST00000409168 TPM1P09493 284 aa19.99■□□□□ 0.79
SHISA6-202ENST00000409168 HOMER1Q86YM7 354 aa19.99■□□□□ 0.79
SHISA6-202ENST00000409168 SMC4Q9NTJ3 1288 aa19.98■□□□□ 0.79
SHISA6-202ENST00000409168 IKQ13123 557 aaPredicted RBP19.97■□□□□ 0.79
SHISA6-202ENST00000409168 HDGFL2Q7Z4V5 671 aaPredicted RBP19.96■□□□□ 0.79
SHISA6-202ENST00000409168 CCAR1Q8IX12 1150 aaKnown RBP19.96■□□□□ 0.79
SHISA6-202ENST00000409168 USP35Q9P2H5 1018 aa19.95■□□□□ 0.78
SHISA6-202ENST00000409168 HSP90AA2PQ14568 343 aaPredicted RBP19.95■□□□□ 0.78
SHISA6-202ENST00000409168 TMF1P82094 1093 aa19.94■□□□□ 0.78
SHISA6-202ENST00000409168 RUFY1Q96T51 708 aa19.94■□□□□ 0.78
SHISA6-202ENST00000409168 SYNE3Q6ZMZ3 975 aa19.94■□□□□ 0.78
SHISA6-202ENST00000409168 SPAG9O60271 1321 aaKnown RBP19.94■□□□□ 0.78
SHISA6-202ENST00000409168 STK11IPQ8N1F8 1099 aa19.94■□□□□ 0.78
SHISA6-202ENST00000409168 IPO8O15397 1037 aaKnown RBP19.93■□□□□ 0.78
SHISA6-202ENST00000409168 DCAF8L1A6NGE4 600 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 FAM177BA6PVY3 158 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 NFXL1Q6ZNB6 911 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 AMPHP49418 695 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 NGDNQ8NEJ9 315 aaKnown RBP19.93■□□□□ 0.78
SHISA6-202ENST00000409168 EIF2S2P20042 333 aaKnown RBP19.93■□□□□ 0.78
SHISA6-202ENST00000409168 AMOTL1Q8IY63 956 aa19.93■□□□□ 0.78
SHISA6-202ENST00000409168 CSPP1Q1MSJ5 1256 aa19.92■□□□□ 0.78
SHISA6-202ENST00000409168 RRP7AQ9Y3A4 280 aaKnown RBP19.92■□□□□ 0.78
SHISA6-202ENST00000409168 NEFHP12036 1026 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 EPS15P42566 896 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 CHMP4CQ96CF2 233 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 FOXD1Q16676 465 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 HSP90AB3PQ58FF7 597 aa19.91■□□□□ 0.78
SHISA6-202ENST00000409168 PLIN1O60240 522 aa19.9■□□□□ 0.78
SHISA6-202ENST00000409168 CHMP4BP1P59074 171 aa19.9■□□□□ 0.78
SHISA6-202ENST00000409168 CCDC27Q2M243 656 aa19.9■□□□□ 0.78
SHISA6-202ENST00000409168 IPO7O95373 1038 aaKnown RBP19.89■□□□□ 0.77
SHISA6-202ENST00000409168 TRIM29Q14134 588 aa19.89■□□□□ 0.77
SHISA6-202ENST00000409168 GPS2Q13227 327 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 TTC16Q8NEE8 873 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 BCL2L13Q9BXK5 485 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 MAPK8IP2Q13387 824 aaPredicted RBP19.88■□□□□ 0.77
SHISA6-202ENST00000409168 PDILTQ8N807 584 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 PLCD3Q8N3E9 789 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 FAM13BQ9NYF5 915 aa19.88■□□□□ 0.77
SHISA6-202ENST00000409168 RWDD1Q9H446 243 aaPredicted RBP19.87■□□□□ 0.77
SHISA6-202ENST00000409168 TCERG1O14776 1098 aaKnown RBP19.87■□□□□ 0.77
SHISA6-202ENST00000409168 ANO2Q9NQ90 1003 aa19.84■□□□□ 0.77
SHISA6-202ENST00000409168 MYCNP04198 464 aaPredicted RBP19.84■□□□□ 0.77
SHISA6-202ENST00000409168 LMOD3Q0VAK6 560 aa19.84■□□□□ 0.77
SHISA6-202ENST00000409168 CAGE1Q8TC20 777 aa19.84■□□□□ 0.77
SHISA6-202ENST00000409168 HDGFP51858 240 aaKnown RBP19.84■□□□□ 0.77
SHISA6-202ENST00000409168 PSMD1Q99460 953 aa19.84■□□□□ 0.77
SHISA6-202ENST00000409168 RBM19Q9Y4C8 960 aaKnown RBP19.83■□□□□ 0.76
SHISA6-202ENST00000409168 PHF14O94880 888 aa19.82■□□□□ 0.76
SHISA6-202ENST00000409168 BICD2Q8TD16 824 aa19.81■□□□□ 0.76
SHISA6-202ENST00000409168 BRPF1P55201 1214 aaPredicted RBP19.81■□□□□ 0.76
SHISA6-202ENST00000409168 WWC2Q6AWC2 1192 aa19.81■□□□□ 0.76
SHISA6-202ENST00000409168 DDX49Q9Y6V7 483 aaKnown RBP19.81■□□□□ 0.76
SHISA6-202ENST00000409168 OFD1O75665 1012 aa19.81■□□□□ 0.76
SHISA6-202ENST00000409168 H0YHG0 523 aa19.8■□□□□ 0.76
SHISA6-202ENST00000409168 ANKRD45Q5TZF3 282 aa19.8■□□□□ 0.76
SHISA6-202ENST00000409168 ATP2B2Q01814 1243 aa19.8■□□□□ 0.76
SHISA6-202ENST00000409168 RBM33Q96EV2 1170 aaKnown RBP19.8■□□□□ 0.76
SHISA6-202ENST00000409168 ST18O60284 1047 aa19.8■□□□□ 0.76
SHISA6-202ENST00000409168 CCDC47Q96A33 483 aaKnown RBP19.8■□□□□ 0.76
SHISA6-202ENST00000409168 CPLX1O14810 134 aa19.79■□□□□ 0.76
SHISA6-202ENST00000409168 ATP2B1P20020 1258 aa19.79■□□□□ 0.76
SHISA6-202ENST00000409168 HMMRO75330 724 aa19.78■□□□□ 0.76
SHISA6-202ENST00000409168 CFAP44Q96MT7 982 aa19.77■□□□□ 0.76
SHISA6-202ENST00000409168 ANKRD20A12PQ8NF67 263 aa19.76■□□□□ 0.75
SHISA6-202ENST00000409168 CCDC191Q8NCU4 936 aa19.76■□□□□ 0.75
SHISA6-202ENST00000409168 ENOX2Q16206 610 aaKnown RBP19.76■□□□□ 0.75
SHISA6-202ENST00000409168 TEX35Q5T0J7 233 aa19.75■□□□□ 0.75
SHISA6-202ENST00000409168 VPS37CA5D8V6 355 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms