RNA–Protein interactions for RNA: ENST00000407142.5

PPM1F-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PPM1F, Length 5,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-203ENST00000407142 SYAP1Q96A49 352 aaPredicted RBP19.15■□□□□ 0.66
PPM1F-203ENST00000407142 GORABQ5T7V8 394 aa19.15■□□□□ 0.66
PPM1F-203ENST00000407142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.15■□□□□ 0.66
PPM1F-203ENST00000407142 L3MBTL2Q969R5 705 aa19.14■□□□□ 0.66
PPM1F-203ENST00000407142 LTV1Q96GA3 475 aaPredicted RBP19.14■□□□□ 0.65
PPM1F-203ENST00000407142 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.65
PPM1F-203ENST00000407142 G3V3G9 751 aa19.14■□□□□ 0.65
PPM1F-203ENST00000407142 DCAF8Q5TAQ9 597 aa19.14■□□□□ 0.65
PPM1F-203ENST00000407142 FGD5Q6ZNL6 1462 aa19.13■□□□□ 0.65
PPM1F-203ENST00000407142 ITPRIPQ8IWB1 547 aa19.12■□□□□ 0.65
PPM1F-203ENST00000407142 CHMP3Q9Y3E7 222 aa19.12■□□□□ 0.65
PPM1F-203ENST00000407142 RWDD1Q9H446 243 aaPredicted RBP19.12■□□□□ 0.65
PPM1F-203ENST00000407142 EVA1CP58658 441 aa19.11■□□□□ 0.65
PPM1F-203ENST00000407142 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.11■□□□□ 0.65
PPM1F-203ENST00000407142 GNL2Q13823 731 aaKnown RBP19.11■□□□□ 0.65
PPM1F-203ENST00000407142 APBB1O00213 710 aa19.11■□□□□ 0.65
PPM1F-203ENST00000407142 GPATCH3Q96I76 525 aa19.11■□□□□ 0.65
PPM1F-203ENST00000407142 EVC2Q86UK5 1308 aa19.1■□□□□ 0.65
PPM1F-203ENST00000407142 GTF2E1P29083 439 aaPredicted RBP19.09■□□□□ 0.65
PPM1F-203ENST00000407142 COG3Q96JB2 828 aa19.09■□□□□ 0.65
PPM1F-203ENST00000407142 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
PPM1F-203ENST00000407142 HMMRO75330 724 aa19.09■□□□□ 0.65
PPM1F-203ENST00000407142 CLSTN1O94985 981 aa19.06■□□□□ 0.64
PPM1F-203ENST00000407142 PHLDB1Q86UU1 1377 aa19.06■□□□□ 0.64
PPM1F-203ENST00000407142 C1orf141Q5JVX7 400 aa19.06■□□□□ 0.64
PPM1F-203ENST00000407142 SMC4Q9NTJ3 1288 aa19.06■□□□□ 0.64
PPM1F-203ENST00000407142 MEX3CQ5U5Q3 659 aaKnown RBP19.06■□□□□ 0.64
PPM1F-203ENST00000407142 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
PPM1F-203ENST00000407142 PMFBP1Q8TBY8 1022 aa19.04■□□□□ 0.64
PPM1F-203ENST00000407142 MFAP1P55081 439 aaKnown RBP19.04■□□□□ 0.64
PPM1F-203ENST00000407142 TPM4P67936 248 aa19.04■□□□□ 0.64
PPM1F-203ENST00000407142 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
PPM1F-203ENST00000407142 RAD54L2Q9Y4B4 1467 aa19.04■□□□□ 0.64
PPM1F-203ENST00000407142 NOC3LQ8WTT2 800 aaKnown RBP19.03■□□□□ 0.64
PPM1F-203ENST00000407142 CGNL1Q0VF96 1302 aa19.03■□□□□ 0.64
PPM1F-203ENST00000407142 HSP90AA2PQ14568 343 aaPredicted RBP19.02■□□□□ 0.64
PPM1F-203ENST00000407142 GOLGA6L1Q8N7Z2 621 aa19.01■□□□□ 0.63
PPM1F-203ENST00000407142 RSPH6AQ9H0K4 717 aa19.01■□□□□ 0.63
PPM1F-203ENST00000407142 MYOM3Q5VTT5 1437 aa19.01■□□□□ 0.63
PPM1F-203ENST00000407142 SLC4A10Q6U841 1118 aa19■□□□□ 0.63
PPM1F-203ENST00000407142 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
PPM1F-203ENST00000407142 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
PPM1F-203ENST00000407142 IGF1RP08069 1367 aa18.99■□□□□ 0.63
PPM1F-203ENST00000407142 AQRO60306 1485 aaKnown RBP eCLIP18.99■□□□□ 0.631e-6■■■■■ 33
PPM1F-203ENST00000407142 PSME1Q06323 249 aa18.98■□□□□ 0.63
PPM1F-203ENST00000407142 USP35Q9P2H5 1018 aa18.98■□□□□ 0.63
PPM1F-203ENST00000407142 FRAT2O75474 233 aaPredicted RBP18.98■□□□□ 0.63
PPM1F-203ENST00000407142 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
PPM1F-203ENST00000407142 GRIN2BQ13224 1484 aa18.98■□□□□ 0.63
PPM1F-203ENST00000407142 CSPP1Q1MSJ5 1256 aa18.98■□□□□ 0.63
PPM1F-203ENST00000407142 CCDC146Q8IYE0 955 aa18.97■□□□□ 0.63
PPM1F-203ENST00000407142 ATF3P18847 181 aa18.97■□□□□ 0.63
PPM1F-203ENST00000407142 CENPJQ9HC77 1338 aaPredicted RBP18.96■□□□□ 0.63
PPM1F-203ENST00000407142 TEFQ10587 303 aa18.96■□□□□ 0.63
PPM1F-203ENST00000407142 TTC5Q8N0Z6 440 aa18.96■□□□□ 0.63
PPM1F-203ENST00000407142 ST20-MTHFSA0A0A6YYL1 179 aa18.95■□□□□ 0.62
PPM1F-203ENST00000407142 MSH5O43196 834 aa18.95■□□□□ 0.62
PPM1F-203ENST00000407142 PHF14O94880 888 aa18.94■□□□□ 0.62
PPM1F-203ENST00000407142 PANK3Q9H999 370 aa18.94■□□□□ 0.62
PPM1F-203ENST00000407142 STAC3Q96MF2 364 aa18.93■□□□□ 0.62
PPM1F-203ENST00000407142 CUX1P39880 1505 aa18.93■□□□□ 0.62
PPM1F-203ENST00000407142 DDX11L8A8MPP1 907 aa18.93■□□□□ 0.62
PPM1F-203ENST00000407142 TRIM6-TRIM34B2RNG4 842 aa18.92■□□□□ 0.62
PPM1F-203ENST00000407142 MYBBP1AQ9BQG0 1328 aaKnown RBP18.92■□□□□ 0.62
PPM1F-203ENST00000407142 FOXD4L1Q9NU39 408 aa18.92■□□□□ 0.62
PPM1F-203ENST00000407142 MRC2Q9UBG0 1479 aa18.91■□□□□ 0.62
PPM1F-203ENST00000407142 PRDM2Q13029 1718 aa18.91■□□□□ 0.62
PPM1F-203ENST00000407142 RUSC2Q8N2Y8 1516 aa18.91■□□□□ 0.62
PPM1F-203ENST00000407142 HSP90B1P14625 803 aaKnown RBP18.91■□□□□ 0.62
PPM1F-203ENST00000407142 DHX57Q6P158 1386 aaKnown RBP18.9■□□□□ 0.62
PPM1F-203ENST00000407142 CCDC34Q96HJ3 373 aa18.9■□□□□ 0.62
PPM1F-203ENST00000407142 A0A0U1RQG5 324 aaPredicted RBP18.89■□□□□ 0.61
PPM1F-203ENST00000407142 VSIG10Q8N0Z9 540 aa18.88■□□□□ 0.61
PPM1F-203ENST00000407142 GSE1Q14687 1217 aa18.88■□□□□ 0.61
PPM1F-203ENST00000407142 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
PPM1F-203ENST00000407142 SYNJ2O15056 1496 aa18.88■□□□□ 0.61
PPM1F-203ENST00000407142 NEXNQ0ZGT2 675 aa18.87■□□□□ 0.61
PPM1F-203ENST00000407142 NGEFQ8N5V2 710 aa18.87■□□□□ 0.61
PPM1F-203ENST00000407142 IFT140Q96RY7 1462 aa18.87■□□□□ 0.61
PPM1F-203ENST00000407142 ARHGAP5Q13017 1502 aa18.86■□□□□ 0.61
PPM1F-203ENST00000407142 ST18O60284 1047 aa18.86■□□□□ 0.61
PPM1F-203ENST00000407142 PRG4Q92954 1404 aaPredicted RBP18.86■□□□□ 0.61
PPM1F-203ENST00000407142 NOL8Q76FK4 1167 aaKnown RBP18.85■□□□□ 0.61
PPM1F-203ENST00000407142 CLUAP1Q96AJ1 413 aa18.85■□□□□ 0.61
PPM1F-203ENST00000407142 USP47Q96K76 1375 aa18.85■□□□□ 0.61
PPM1F-203ENST00000407142 CHMP4CQ96CF2 233 aa18.84■□□□□ 0.61
PPM1F-203ENST00000407142 TOMM22Q9NS69 142 aa18.84■□□□□ 0.61
PPM1F-203ENST00000407142 DIAPH1O60610 1272 aaKnown RBP18.84■□□□□ 0.61
PPM1F-203ENST00000407142 TPM3P06753 285 aa18.83■□□□□ 0.61
PPM1F-203ENST00000407142 RRP7AQ9Y3A4 280 aaKnown RBP18.83■□□□□ 0.61
PPM1F-203ENST00000407142 SYTL4Q96C24 671 aaPredicted RBP18.83■□□□□ 0.6
PPM1F-203ENST00000407142 MIA2Q96PC5 1412 aa18.83■□□□□ 0.6
PPM1F-203ENST00000407142 SKOR2Q2VWA4 1001 aaPredicted RBP18.82■□□□□ 0.6
PPM1F-203ENST00000407142 SETQ01105 290 aaPredicted RBP18.81■□□□□ 0.6
PPM1F-203ENST00000407142 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
PPM1F-203ENST00000407142 PDE4AP27815 886 aa18.81■□□□□ 0.6
PPM1F-203ENST00000407142 NOL10Q9BSC4 688 aaKnown RBP18.81■□□□□ 0.6
PPM1F-203ENST00000407142 FGD6Q6ZV73 1430 aa18.81■□□□□ 0.6
PPM1F-203ENST00000407142 LRRFIP1Q32MZ4 808 aaKnown RBP18.8■□□□□ 0.6
PPM1F-203ENST00000407142 KIF16BQ96L93 1317 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms