RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 HSP90AA2PQ14568 343 aaPredicted RBP16.64■□□□□ 0.25
SNED1-205ENST00000405547 LMOD3Q0VAK6 560 aa16.64■□□□□ 0.25
SNED1-205ENST00000405547 CCDC146Q8IYE0 955 aa16.64■□□□□ 0.25
SNED1-205ENST00000405547 E9PSI1 815 aa16.63■□□□□ 0.25
SNED1-205ENST00000405547 KIF21BO75037 1637 aa16.63■□□□□ 0.25
SNED1-205ENST00000405547 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
SNED1-205ENST00000405547 CLUAP1Q96AJ1 413 aa16.62■□□□□ 0.25
SNED1-205ENST00000405547 STK31Q9BXU1 1019 aa16.62■□□□□ 0.25
SNED1-205ENST00000405547 TPM4P67936 248 aa16.62■□□□□ 0.25
SNED1-205ENST00000405547 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
SNED1-205ENST00000405547 PRDM2Q13029 1718 aa16.61■□□□□ 0.25
SNED1-205ENST00000405547 TRIM6-TRIM34B2RNG4 842 aa16.61■□□□□ 0.25
SNED1-205ENST00000405547 SOX12O15370 315 aa16.61■□□□□ 0.25
SNED1-205ENST00000405547 GGT6Q6P531 493 aa16.6■□□□□ 0.25
SNED1-205ENST00000405547 UACAQ9BZF9 1416 aa16.6■□□□□ 0.25
SNED1-205ENST00000405547 PANK3Q9H999 370 aa16.6■□□□□ 0.25
SNED1-205ENST00000405547 EXOC6Q8TAG9 804 aa16.58■□□□□ 0.25
SNED1-205ENST00000405547 CCDC34Q96HJ3 373 aa16.58■□□□□ 0.25
SNED1-205ENST00000405547 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
SNED1-205ENST00000405547 HNRNPMP52272 730 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNED1-205ENST00000405547 CADPSQ9ULU8 1353 aa16.56■□□□□ 0.24
SNED1-205ENST00000405547 PLIN1O60240 522 aa16.55■□□□□ 0.24
SNED1-205ENST00000405547 NPHP1O15259 732 aa16.55■□□□□ 0.24
SNED1-205ENST00000405547 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
SNED1-205ENST00000405547 DDX49Q9Y6V7 483 aaKnown RBP16.54■□□□□ 0.24
SNED1-205ENST00000405547 ZKSCAN2Q63HK3 967 aa16.54■□□□□ 0.24
SNED1-205ENST00000405547 ATP6V1DQ9Y5K8 247 aa16.54■□□□□ 0.24
SNED1-205ENST00000405547 KIF3AQ9Y496 699 aa16.54■□□□□ 0.24
SNED1-205ENST00000405547 KIF16BQ96L93 1317 aa16.53■□□□□ 0.24
SNED1-205ENST00000405547 CNTLNQ9NXG0 1405 aa16.53■□□□□ 0.24
SNED1-205ENST00000405547 ARID3AQ99856 593 aa16.53■□□□□ 0.24
SNED1-205ENST00000405547 TULP1O00294 542 aaPredicted RBP16.52■□□□□ 0.24
SNED1-205ENST00000405547 KIF3BO15066 747 aa16.52■□□□□ 0.23
SNED1-205ENST00000405547 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
SNED1-205ENST00000405547 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
SNED1-205ENST00000405547 AAMPQ13685 434 aa16.51■□□□□ 0.23
SNED1-205ENST00000405547 SLC4A3P48751 1232 aa16.5■□□□□ 0.23
SNED1-205ENST00000405547 ANKRD45Q5TZF3 282 aa16.5■□□□□ 0.23
SNED1-205ENST00000405547 FGD6Q6ZV73 1430 aa16.5■□□□□ 0.23
SNED1-205ENST00000405547 LRRC9Q6ZRR7 1453 aa16.5■□□□□ 0.23
SNED1-205ENST00000405547 SLC4A10Q6U841 1118 aa16.5■□□□□ 0.23
SNED1-205ENST00000405547 DDX19BQ9UMR2 479 aa16.49■□□□□ 0.23
SNED1-205ENST00000405547 MYOM3Q5VTT5 1437 aa16.48■□□□□ 0.23
SNED1-205ENST00000405547 ERICH3Q5RHP9 1530 aa16.48■□□□□ 0.23
SNED1-205ENST00000405547 GOLGA6L1Q8N7Z2 621 aa16.48■□□□□ 0.23
SNED1-205ENST00000405547 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
SNED1-205ENST00000405547 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
SNED1-205ENST00000405547 HSP90B1P14625 803 aaKnown RBP16.47■□□□□ 0.23
SNED1-205ENST00000405547 REC8O95072 547 aa16.47■□□□□ 0.23
SNED1-205ENST00000405547 COG6Q9Y2V7 657 aa16.47■□□□□ 0.23
SNED1-205ENST00000405547 RRP7AQ9Y3A4 280 aaKnown RBP16.47■□□□□ 0.23
SNED1-205ENST00000405547 CHMP4CQ96CF2 233 aa16.46■□□□□ 0.23
SNED1-205ENST00000405547 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
SNED1-205ENST00000405547 BCL2L13Q9BXK5 485 aa16.45■□□□□ 0.22
SNED1-205ENST00000405547 BRD4O60885 1362 aaPredicted RBP16.45■□□□□ 0.22
SNED1-205ENST00000405547 MLECQ14165 292 aa16.44■□□□□ 0.22
SNED1-205ENST00000405547 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
SNED1-205ENST00000405547 EVC2Q86UK5 1308 aa16.44■□□□□ 0.22
SNED1-205ENST00000405547 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
SNED1-205ENST00000405547 APAF1O14727 1248 aa16.44■□□□□ 0.22
SNED1-205ENST00000405547 KIF7Q2M1P5 1343 aa16.43■□□□□ 0.22
SNED1-205ENST00000405547 GOLGA6L19H0YKK7 550 aa16.43■□□□□ 0.22
SNED1-205ENST00000405547 NOL8Q76FK4 1167 aaKnown RBP16.43■□□□□ 0.22
SNED1-205ENST00000405547 TRAK1Q9UPV9 953 aa16.43■□□□□ 0.22
SNED1-205ENST00000405547 ROCK1Q13464 1354 aa16.42■□□□□ 0.22
SNED1-205ENST00000405547 WASHC2CQ9Y4E1 1318 aa16.42■□□□□ 0.22
SNED1-205ENST00000405547 FANCD2Q9BXW9 1451 aa16.41■□□□□ 0.22
SNED1-205ENST00000405547 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
SNED1-205ENST00000405547 DZIP1LQ8IYY4 767 aaKnown RBP16.41■□□□□ 0.22
SNED1-205ENST00000405547 NFKBIBQ15653 356 aa16.4■□□□□ 0.22
SNED1-205ENST00000405547 SF3A1Q15459 793 aaKnown RBP16.4■□□□□ 0.22
SNED1-205ENST00000405547 JPH4Q96JJ6 628 aa16.4■□□□□ 0.22
SNED1-205ENST00000405547 RRBP1Q9P2E9 1410 aaKnown RBP16.4■□□□□ 0.22
SNED1-205ENST00000405547 FYCO1Q9BQS8 1478 aa16.4■□□□□ 0.22
SNED1-205ENST00000405547 NOC3LQ8WTT2 800 aaKnown RBP16.4■□□□□ 0.22
SNED1-205ENST00000405547 STAC3Q96MF2 364 aa16.4■□□□□ 0.22
SNED1-205ENST00000405547 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
SNED1-205ENST00000405547 NUCB2P80303 420 aa16.4■□□□□ 0.22
SNED1-205ENST00000405547 FOXD4L5Q5VV16 416 aaPredicted RBP16.39■□□□□ 0.21
SNED1-205ENST00000405547 FOXD4L4Q8WXT5 416 aaPredicted RBP16.39■□□□□ 0.21
SNED1-205ENST00000405547 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.39■□□□□ 0.21
SNED1-205ENST00000405547 H3BQV1 296 aa16.39■□□□□ 0.21
SNED1-205ENST00000405547 IFFO2Q5TF58 517 aa16.39■□□□□ 0.21
SNED1-205ENST00000405547 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
SNED1-205ENST00000405547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.39■□□□□ 0.21
SNED1-205ENST00000405547 AMPHP49418 695 aa16.38■□□□□ 0.21
SNED1-205ENST00000405547 CHMP3Q9Y3E7 222 aa16.38■□□□□ 0.21
SNED1-205ENST00000405547 RUNDC1Q96C34 613 aa16.37■□□□□ 0.21
SNED1-205ENST00000405547 SUPT6HQ7KZ85 1726 aaKnown RBP16.37■□□□□ 0.21
SNED1-205ENST00000405547 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
SNED1-205ENST00000405547 TAF7LQ5H9L4 462 aa16.37■□□□□ 0.21
SNED1-205ENST00000405547 VGFO15240 615 aaPredicted RBP16.36■□□□□ 0.21
SNED1-205ENST00000405547 FAM43AQ8N2R8 423 aa16.36■□□□□ 0.21
SNED1-205ENST00000405547 RUFY2Q8WXA3 655 aa16.36■□□□□ 0.21
SNED1-205ENST00000405547 BECN2A8MW95 431 aa16.36■□□□□ 0.21
SNED1-205ENST00000405547 CASKIN1Q8WXD9 1431 aa16.36■□□□□ 0.21
SNED1-205ENST00000405547 VSIG10Q8N0Z9 540 aa16.36■□□□□ 0.21
SNED1-205ENST00000405547 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
SNED1-205ENST00000405547 TPM3P06753 285 aa16.36■□□□□ 0.21
SNED1-205ENST00000405547 C22orf23Q9BZE7 217 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms