RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 CD109Q6YHK3 1445 aa10.45□□□□□ -0.74
LTBP1-202ENST00000404525 PDE4AP27815 886 aa10.45□□□□□ -0.74
LTBP1-202ENST00000404525 WASHC2AQ641Q2 1341 aa10.45□□□□□ -0.74
LTBP1-202ENST00000404525 ANKRD50Q9ULJ7 1429 aa10.45□□□□□ -0.74
LTBP1-202ENST00000404525 TRIM44Q96DX7 344 aaPredicted RBP10.45□□□□□ -0.74
LTBP1-202ENST00000404525 CNTLNQ9NXG0 1405 aa10.44□□□□□ -0.74
LTBP1-202ENST00000404525 ARHGEF11O15085 1522 aa10.44□□□□□ -0.74
LTBP1-202ENST00000404525 CCDC144AA2RUR9 1427 aa10.43□□□□□ -0.74
LTBP1-202ENST00000404525 C9orf84Q5VXU9 1444 aa10.43□□□□□ -0.74
LTBP1-202ENST00000404525 SCAPERQ9BY12 1400 aa10.43□□□□□ -0.74
LTBP1-202ENST00000404525 EID1Q9Y6B2 187 aa10.43□□□□□ -0.74
LTBP1-202ENST00000404525 NCLP19338 710 aaKnown RBP10.43□□□□□ -0.74
LTBP1-202ENST00000404525 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.42□□□□□ -0.74
LTBP1-202ENST00000404525 BRPF3Q9ULD4 1205 aa10.42□□□□□ -0.74
LTBP1-202ENST00000404525 TNNT2P45379 298 aaPredicted RBP10.41□□□□□ -0.74
LTBP1-202ENST00000404525 CCDC184Q52MB2 194 aa10.41□□□□□ -0.74
LTBP1-202ENST00000404525 CFAP53Q96M91 514 aa10.41□□□□□ -0.74
LTBP1-202ENST00000404525 CEP170Q5SW79 1584 aa10.41□□□□□ -0.74
LTBP1-202ENST00000404525 KNSTRNQ9Y448 316 aa10.41□□□□□ -0.74
LTBP1-202ENST00000404525 MS4A1P11836 297 aa10.4□□□□□ -0.74
LTBP1-202ENST00000404525 AKNAQ7Z591 1439 aa10.4□□□□□ -0.74
LTBP1-202ENST00000404525 DAPK1P53355 1430 aa10.4□□□□□ -0.75
LTBP1-202ENST00000404525 ATP10BO94823 1461 aa10.39□□□□□ -0.75
LTBP1-202ENST00000404525 TMF1P82094 1093 aa10.39□□□□□ -0.75
LTBP1-202ENST00000404525 SMG6Q86US8 1419 aaKnown RBP10.39□□□□□ -0.75
LTBP1-202ENST00000404525 NUP153P49790 1475 aaKnown RBP10.39□□□□□ -0.75
LTBP1-202ENST00000404525 CCDC141Q6ZP82 1450 aa10.39□□□□□ -0.75
LTBP1-202ENST00000404525 RCAN3Q9UKA8 241 aa10.38□□□□□ -0.75
LTBP1-202ENST00000404525 ADGRL1O94910 1474 aa10.38□□□□□ -0.75
LTBP1-202ENST00000404525 CAMSAP2Q08AD1 1489 aa10.38□□□□□ -0.75
LTBP1-202ENST00000404525 CCDC7Q96M83 1385 aa10.38□□□□□ -0.75
LTBP1-202ENST00000404525 DISP1Q96F81 1524 aa10.38□□□□□ -0.75
LTBP1-202ENST00000404525 ASXL2Q76L83 1435 aa10.38□□□□□ -0.75
LTBP1-202ENST00000404525 ROCK2O75116 1388 aaKnown RBP10.38□□□□□ -0.75
LTBP1-202ENST00000404525 PTPN23Q9H3S7 1636 aa10.37□□□□□ -0.75
LTBP1-202ENST00000404525 RAPGEF3O95398 923 aa10.37□□□□□ -0.75
LTBP1-202ENST00000404525 EIF3AQ14152 1382 aaKnown RBP10.37□□□□□ -0.75
LTBP1-202ENST00000404525 NAP1L5Q96NT1 182 aaPredicted RBP10.37□□□□□ -0.75
LTBP1-202ENST00000404525 ABCC2Q92887 1545 aa10.37□□□□□ -0.75
LTBP1-202ENST00000404525 NFKBIBQ15653 356 aa10.36□□□□□ -0.75
LTBP1-202ENST00000404525 EXOC6Q8TAG9 804 aa10.36□□□□□ -0.75
LTBP1-202ENST00000404525 L3MBTL2Q969R5 705 aa10.36□□□□□ -0.75
LTBP1-202ENST00000404525 WDR7Q9Y4E6 1490 aa10.36□□□□□ -0.75
LTBP1-202ENST00000404525 C11orf95C9JLR9 678 aaPredicted RBP10.36□□□□□ -0.75
LTBP1-202ENST00000404525 POGZQ7Z3K3 1410 aa10.36□□□□□ -0.75
LTBP1-202ENST00000404525 RRP1P56182 461 aaKnown RBP10.36□□□□□ -0.75
LTBP1-202ENST00000404525 VGFO15240 615 aaPredicted RBP10.35□□□□□ -0.75
LTBP1-202ENST00000404525 CHD1O14646 1710 aa10.35□□□□□ -0.75
LTBP1-202ENST00000404525 FANCAO15360 1455 aa10.35□□□□□ -0.75
LTBP1-202ENST00000404525 FRAT1Q92837 279 aaPredicted RBP10.35□□□□□ -0.75
LTBP1-202ENST00000404525 ROCK1Q13464 1354 aa10.35□□□□□ -0.75
LTBP1-202ENST00000404525 L1TD1Q5T7N2 865 aaKnown RBP10.35□□□□□ -0.75
LTBP1-202ENST00000404525 STK26Q9P289 416 aa10.35□□□□□ -0.75
LTBP1-202ENST00000404525 HFM1A2PYH4 1435 aa10.34□□□□□ -0.75
LTBP1-202ENST00000404525 TEX14Q8IWB6 1497 aa10.34□□□□□ -0.75
LTBP1-202ENST00000404525 BACH2Q9BYV9 841 aa10.34□□□□□ -0.75
LTBP1-202ENST00000404525 ITSN2Q9NZM3 1697 aa10.34□□□□□ -0.75
LTBP1-202ENST00000404525 FTSJ3Q8IY81 847 aaKnown RBP10.34□□□□□ -0.75
LTBP1-202ENST00000404525 CHMP4BQ9H444 224 aaKnown RBP10.34□□□□□ -0.75
LTBP1-202ENST00000404525 SAMD9Q5K651 1589 aa10.34□□□□□ -0.75
LTBP1-202ENST00000404525 CASC1Q6TDU7 716 aa10.34□□□□□ -0.75
LTBP1-202ENST00000404525 SRPK2P78362 688 aaKnown RBP10.33□□□□□ -0.76
LTBP1-202ENST00000404525 DENND4BO75064 1496 aaPredicted RBP10.33□□□□□ -0.76
LTBP1-202ENST00000404525 STAC3Q96MF2 364 aa10.33□□□□□ -0.76
LTBP1-202ENST00000404525 SLC4A3P48751 1232 aa10.33□□□□□ -0.76
LTBP1-202ENST00000404525 FAM43AQ8N2R8 423 aa10.33□□□□□ -0.76
LTBP1-202ENST00000404525 PKNOX2Q96KN3 472 aa10.33□□□□□ -0.76
LTBP1-202ENST00000404525 PLCH2O75038 1416 aa10.32□□□□□ -0.76
LTBP1-202ENST00000404525 PTMAP06454 111 aaKnown RBP10.32□□□□□ -0.76
LTBP1-202ENST00000404525 HAP1P54257 671 aaPredicted RBP10.32□□□□□ -0.76
LTBP1-202ENST00000404525 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.32□□□□□ -0.76
LTBP1-202ENST00000404525 GPATCH8Q9UKJ3 1502 aaKnown RBP10.31□□□□□ -0.76
LTBP1-202ENST00000404525 CDK11BP21127 795 aaKnown RBP10.31□□□□□ -0.76
LTBP1-202ENST00000404525 KIF7Q2M1P5 1343 aa10.31□□□□□ -0.76
LTBP1-202ENST00000404525 SAFB2Q14151 953 aaKnown RBP eCLIP10.31□□□□□ -0.76
LTBP1-202ENST00000404525 CFAP43Q8NDM7 1665 aa10.3□□□□□ -0.76
LTBP1-202ENST00000404525 NUTM2DQ5VT03 806 aaPredicted RBP10.3□□□□□ -0.76
LTBP1-202ENST00000404525 NEUROD2Q15784 382 aa10.3□□□□□ -0.76
LTBP1-202ENST00000404525 ABCC5O15440 1437 aa10.3□□□□□ -0.76
LTBP1-202ENST00000404525 MAPK8IP3Q9UPT6 1336 aa10.3□□□□□ -0.76
LTBP1-202ENST00000404525 PDE3BQ13370 1112 aa10.3□□□□□ -0.76
LTBP1-202ENST00000404525 RGS3P49796 1198 aa10.29□□□□□ -0.76
LTBP1-202ENST00000404525 ZRSR1Q15695 479 aaKnown RBP10.29□□□□□ -0.76
LTBP1-202ENST00000404525 VSIG10Q8N0Z9 540 aa10.29□□□□□ -0.76
LTBP1-202ENST00000404525 PNNQ9H307 717 aaKnown RBP10.29□□□□□ -0.76
LTBP1-202ENST00000404525 ZBTB7CA1YPR0 619 aa10.29□□□□□ -0.76
LTBP1-202ENST00000404525 HSP90AA2PQ14568 343 aaPredicted RBP10.27□□□□□ -0.77
LTBP1-202ENST00000404525 HDGFL2Q7Z4V5 671 aaPredicted RBP10.27□□□□□ -0.77
LTBP1-202ENST00000404525 RALBP1Q15311 655 aa10.27□□□□□ -0.77
LTBP1-202ENST00000404525 LMOD2Q6P5Q4 547 aa10.27□□□□□ -0.77
LTBP1-202ENST00000404525 CC2D1BQ5T0F9 858 aaKnown RBP10.27□□□□□ -0.77
LTBP1-202ENST00000404525 KIAA1107Q9UPP5 1409 aa10.26□□□□□ -0.77
LTBP1-202ENST00000404525 PLEKHG5O94827 1062 aa10.26□□□□□ -0.77
LTBP1-202ENST00000404525 DNTTIP2Q5QJE6 756 aaKnown RBP10.26□□□□□ -0.77
LTBP1-202ENST00000404525 NAIPQ13075 1403 aa10.26□□□□□ -0.77
LTBP1-202ENST00000404525 FAM161AQ3B820 660 aa10.26□□□□□ -0.77
LTBP1-202ENST00000404525 SLC52A1Q9NWF4 448 aa10.25□□□□□ -0.77
LTBP1-202ENST00000404525 NCOA1Q15788 1441 aa10.25□□□□□ -0.77
LTBP1-202ENST00000404525 UHRF1BP1LA0JNW5 1464 aa10.24□□□□□ -0.77
LTBP1-202ENST00000404525 FRAT2O75474 233 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms