RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 KIAA1107Q9UPP5 1409 aa12.53□□□□□ -0.4
SMC1B-202ENST00000404354 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
SMC1B-202ENST00000404354 WASHC2CQ9Y4E1 1318 aa12.52□□□□□ -0.4
SMC1B-202ENST00000404354 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.41
SMC1B-202ENST00000404354 ROCK1Q13464 1354 aa12.51□□□□□ -0.41
SMC1B-202ENST00000404354 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
SMC1B-202ENST00000404354 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
SMC1B-202ENST00000404354 PDE3BQ13370 1112 aa12.5□□□□□ -0.41
SMC1B-202ENST00000404354 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
SMC1B-202ENST00000404354 ANKRD50Q9ULJ7 1429 aa12.49□□□□□ -0.41
SMC1B-202ENST00000404354 WDR43Q15061 677 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMC1B-202ENST00000404354 TARBP1Q13395 1621 aaKnown RBP12.49□□□□□ -0.41
SMC1B-202ENST00000404354 BCAR3O75815 825 aa12.48□□□□□ -0.41
SMC1B-202ENST00000404354 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
SMC1B-202ENST00000404354 C8orf34Q49A92 452 aa12.48□□□□□ -0.41
SMC1B-202ENST00000404354 NEUROD2Q15784 382 aa12.48□□□□□ -0.41
SMC1B-202ENST00000404354 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
SMC1B-202ENST00000404354 ANKRD30AQ9BXX3 1397 aa12.47□□□□□ -0.41
SMC1B-202ENST00000404354 ABCA5Q8WWZ7 1642 aa12.47□□□□□ -0.41
SMC1B-202ENST00000404354 POGKQ9P215 609 aa12.47□□□□□ -0.41
SMC1B-202ENST00000404354 KDM5CP41229 1560 aa12.46□□□□□ -0.42
SMC1B-202ENST00000404354 DISP3Q9P2K9 1392 aa12.46□□□□□ -0.42
SMC1B-202ENST00000404354 SEC24BO95487 1268 aa12.45□□□□□ -0.42
SMC1B-202ENST00000404354 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
SMC1B-202ENST00000404354 CAMSAP2Q08AD1 1489 aa12.44□□□□□ -0.42
SMC1B-202ENST00000404354 CENPQQ7L2Z9 268 aaPredicted RBP12.44□□□□□ -0.42
SMC1B-202ENST00000404354 GZF1Q9H116 711 aaPredicted RBP12.44□□□□□ -0.42
SMC1B-202ENST00000404354 MBD5Q9P267 1494 aa12.44□□□□□ -0.42
SMC1B-202ENST00000404354 CANXP27824 592 aaKnown RBP12.44□□□□□ -0.42
SMC1B-202ENST00000404354 APAF1O14727 1248 aa12.43□□□□□ -0.42
SMC1B-202ENST00000404354 DUSP27Q5VZP5 1158 aa12.43□□□□□ -0.42
SMC1B-202ENST00000404354 PARD3Q8TEW0 1356 aa12.43□□□□□ -0.42
SMC1B-202ENST00000404354 PLEKHH1Q9ULM0 1364 aa12.43□□□□□ -0.42
SMC1B-202ENST00000404354 PLEKHD1A6NEE1 506 aa12.43□□□□□ -0.42
SMC1B-202ENST00000404354 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
SMC1B-202ENST00000404354 GOLGA2Q08379 1002 aa12.43□□□□□ -0.42
SMC1B-202ENST00000404354 NUP153P49790 1475 aaKnown RBP12.43□□□□□ -0.42
SMC1B-202ENST00000404354 IQGAP2Q13576 1575 aa12.43□□□□□ -0.42
SMC1B-202ENST00000404354 IGHDP01880 384 aa12.42□□□□□ -0.42
SMC1B-202ENST00000404354 TNNT2P45379 298 aaPredicted RBP12.42□□□□□ -0.42
SMC1B-202ENST00000404354 KDM2BQ8NHM5 1336 aa12.42□□□□□ -0.42
SMC1B-202ENST00000404354 PLB1Q6P1J6 1458 aa12.42□□□□□ -0.42
SMC1B-202ENST00000404354 WDR62O43379 1518 aa12.42□□□□□ -0.42
SMC1B-202ENST00000404354 KIAA0586Q9BVV6 1533 aa12.42□□□□□ -0.42
SMC1B-202ENST00000404354 COG6Q9Y2V7 657 aa12.42□□□□□ -0.42
SMC1B-202ENST00000404354 DNMT1P26358 1616 aaKnown RBP12.42□□□□□ -0.42
SMC1B-202ENST00000404354 PANK1Q8TE04 598 aa12.41□□□□□ -0.42
SMC1B-202ENST00000404354 BCL2L13Q9BXK5 485 aa12.41□□□□□ -0.42
SMC1B-202ENST00000404354 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
SMC1B-202ENST00000404354 RALGAPBQ86X10 1494 aa12.41□□□□□ -0.42
SMC1B-202ENST00000404354 CHMP7Q8WUX9 453 aaPredicted RBP12.41□□□□□ -0.42
SMC1B-202ENST00000404354 TMF1P82094 1093 aa12.4□□□□□ -0.42
SMC1B-202ENST00000404354 TESK2Q96S53 571 aa12.4□□□□□ -0.42
SMC1B-202ENST00000404354 ZNF608Q9ULD9 1512 aaPredicted RBP12.4□□□□□ -0.42
SMC1B-202ENST00000404354 PPP2R1AP30153 589 aa12.39□□□□□ -0.43
SMC1B-202ENST00000404354 RRP7AQ9Y3A4 280 aaKnown RBP12.39□□□□□ -0.43
SMC1B-202ENST00000404354 GPATCH8Q9UKJ3 1502 aaKnown RBP12.39□□□□□ -0.43
SMC1B-202ENST00000404354 CLUAP1Q96AJ1 413 aa12.39□□□□□ -0.43
SMC1B-202ENST00000404354 POLR1AO95602 1720 aaPredicted RBP12.39□□□□□ -0.43
SMC1B-202ENST00000404354 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.38□□□□□ -0.43
SMC1B-202ENST00000404354 MRC2Q9UBG0 1479 aa12.38□□□□□ -0.43
SMC1B-202ENST00000404354 KIF14Q15058 1648 aa12.38□□□□□ -0.43
SMC1B-202ENST00000404354 SENP3Q9H4L4 574 aaPredicted RBP12.37□□□□□ -0.43
SMC1B-202ENST00000404354 TNNQ9UQP3 1299 aa12.37□□□□□ -0.43
SMC1B-202ENST00000404354 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
SMC1B-202ENST00000404354 CCDC144AA2RUR9 1427 aa12.36□□□□□ -0.43
SMC1B-202ENST00000404354 C9orf84Q5VXU9 1444 aa12.36□□□□□ -0.43
SMC1B-202ENST00000404354 UHRF1BP1Q6BDS2 1440 aa12.35□□□□□ -0.43
SMC1B-202ENST00000404354 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
SMC1B-202ENST00000404354 RRAGDQ9NQL2 400 aaPredicted RBP12.34□□□□□ -0.43
SMC1B-202ENST00000404354 PBRM1Q86U86 1689 aa12.33□□□□□ -0.44
SMC1B-202ENST00000404354 JPH4Q96JJ6 628 aa12.32□□□□□ -0.44
SMC1B-202ENST00000404354 DISP1Q96F81 1524 aa12.32□□□□□ -0.44
SMC1B-202ENST00000404354 ERBINQ96RT1 1412 aa12.32□□□□□ -0.44
SMC1B-202ENST00000404354 PANK2Q9BZ23 570 aa12.31□□□□□ -0.44
SMC1B-202ENST00000404354 USP19O94966 1318 aa12.31□□□□□ -0.44
SMC1B-202ENST00000404354 PRAG1Q86YV5 1406 aa12.31□□□□□ -0.44
SMC1B-202ENST00000404354 NAP1L5Q96NT1 182 aaPredicted RBP12.3□□□□□ -0.44
SMC1B-202ENST00000404354 UBE2Q2Q8WVN8 375 aa12.3□□□□□ -0.44
SMC1B-202ENST00000404354 BLMP54132 1417 aaPredicted RBP12.3□□□□□ -0.44
SMC1B-202ENST00000404354 BECN1Q14457 450 aa12.29□□□□□ -0.44
SMC1B-202ENST00000404354 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
SMC1B-202ENST00000404354 FAM43AQ8N2R8 423 aa12.28□□□□□ -0.44
SMC1B-202ENST00000404354 RAPGEF6Q8TEU7 1601 aa12.27□□□□□ -0.45
SMC1B-202ENST00000404354 MFAP1P55081 439 aaKnown RBP12.27□□□□□ -0.45
SMC1B-202ENST00000404354 PCDHB15Q9Y5E8 787 aa12.27□□□□□ -0.45
SMC1B-202ENST00000404354 CENPJQ9HC77 1338 aaPredicted RBP12.27□□□□□ -0.45
SMC1B-202ENST00000404354 RLBP1P12271 317 aa12.26□□□□□ -0.45
SMC1B-202ENST00000404354 ZMYM4Q5VZL5 1548 aa12.26□□□□□ -0.45
SMC1B-202ENST00000404354 TBC1D2Q9BYX2 928 aa12.26□□□□□ -0.45
SMC1B-202ENST00000404354 ADAMTS12P58397 1594 aa12.26□□□□□ -0.45
SMC1B-202ENST00000404354 MAGI2Q86UL8 1455 aa12.26□□□□□ -0.45
SMC1B-202ENST00000404354 RSPH6AQ9H0K4 717 aa12.26□□□□□ -0.45
SMC1B-202ENST00000404354 UPF2Q9HAU5 1272 aaKnown RBP12.26□□□□□ -0.45
SMC1B-202ENST00000404354 ZNF521Q96K83 1311 aa12.25□□□□□ -0.45
SMC1B-202ENST00000404354 EIF4G3O43432 1585 aaKnown RBP12.25□□□□□ -0.45
SMC1B-202ENST00000404354 KIAA0556O60303 1618 aa12.25□□□□□ -0.45
SMC1B-202ENST00000404354 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
SMC1B-202ENST00000404354 PDZRN3Q9UPQ7 1066 aa12.25□□□□□ -0.45
SMC1B-202ENST00000404354 XRCC6P12956 609 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms