RNA–Protein interactions for RNA: ENST00000402541.5

HS1BP3-202, Transcript of HCLS1 binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene HS1BP3, Length 4,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3-202ENST00000402541 U2AF1L5P0DN76 240 aaPredicted RBP14.6□□□□□ -0.07
HS1BP3-202ENST00000402541 MS4A1P11836 297 aa14.6□□□□□ -0.07
HS1BP3-202ENST00000402541 U2AF1Q01081 240 aaKnown RBP eCLIP14.6□□□□□ -0.07
HS1BP3-202ENST00000402541 NAP1L2Q9ULW6 460 aaPredicted RBP14.59□□□□□ -0.07
HS1BP3-202ENST00000402541 CHMP4BQ9H444 224 aaKnown RBP14.59□□□□□ -0.07
HS1BP3-202ENST00000402541 RAPGEF6Q8TEU7 1601 aa14.59□□□□□ -0.07
HS1BP3-202ENST00000402541 TROQ12816 1431 aaPredicted RBP14.59□□□□□ -0.07
HS1BP3-202ENST00000402541 APBB1O00213 710 aa14.58□□□□□ -0.07
HS1BP3-202ENST00000402541 L3MBTL2Q969R5 705 aa14.58□□□□□ -0.07
HS1BP3-202ENST00000402541 CLASP1Q7Z460 1538 aa14.58□□□□□ -0.07
HS1BP3-202ENST00000402541 GOLGA2Q08379 1002 aa14.58□□□□□ -0.08
HS1BP3-202ENST00000402541 RTF1Q92541 710 aaKnown RBP14.58□□□□□ -0.08
HS1BP3-202ENST00000402541 TIAM1Q13009 1591 aa14.58□□□□□ -0.08
HS1BP3-202ENST00000402541 PTMAP06454 111 aaKnown RBP14.58□□□□□ -0.08
HS1BP3-202ENST00000402541 NUTM2DQ5VT03 806 aaPredicted RBP14.58□□□□□ -0.08
HS1BP3-202ENST00000402541 ARHGEF11O15085 1522 aa14.58□□□□□ -0.08
HS1BP3-202ENST00000402541 PLCB2Q00722 1185 aa14.57□□□□□ -0.08
HS1BP3-202ENST00000402541 HDGFL2Q7Z4V5 671 aaPredicted RBP14.57□□□□□ -0.08
HS1BP3-202ENST00000402541 SPAG9O60271 1321 aaKnown RBP14.57□□□□□ -0.08
HS1BP3-202ENST00000402541 ERCC6L2Q5T890 1561 aa14.57□□□□□ -0.08
HS1BP3-202ENST00000402541 NUP153P49790 1475 aaKnown RBP14.57□□□□□ -0.08
HS1BP3-202ENST00000402541 ZNF330Q9Y3S2 320 aaPredicted RBP14.56□□□□□ -0.08
HS1BP3-202ENST00000402541 ATP10BO94823 1461 aa14.55□□□□□ -0.08
HS1BP3-202ENST00000402541 NUTM2FA1L443 756 aa14.55□□□□□ -0.08
HS1BP3-202ENST00000402541 CSB-PGBD3P0DP91 1061 aa14.54□□□□□ -0.08
HS1BP3-202ENST00000402541 NCOA2Q15596 1464 aa14.54□□□□□ -0.08
HS1BP3-202ENST00000402541 RBM19Q9Y4C8 960 aaKnown RBP14.53□□□□□ -0.08
HS1BP3-202ENST00000402541 EHBP1L1Q8N3D4 1523 aa14.53□□□□□ -0.08
HS1BP3-202ENST00000402541 HSP90AB1P08238 724 aaKnown RBP14.53□□□□□ -0.08
HS1BP3-202ENST00000402541 ABCC2Q92887 1545 aa14.53□□□□□ -0.08
HS1BP3-202ENST00000402541 ZNF644Q9H582 1327 aaPredicted RBP14.52□□□□□ -0.08
HS1BP3-202ENST00000402541 ROCK2O75116 1388 aaKnown RBP14.52□□□□□ -0.09
HS1BP3-202ENST00000402541 PHLDB1Q86UU1 1377 aa14.51□□□□□ -0.09
HS1BP3-202ENST00000402541 RSPH4AQ5TD94 716 aa14.51□□□□□ -0.09
HS1BP3-202ENST00000402541 KTN1Q86UP2 1357 aaKnown RBP14.51□□□□□ -0.09
HS1BP3-202ENST00000402541 WASHC2CQ9Y4E1 1318 aa14.5□□□□□ -0.09
HS1BP3-202ENST00000402541 CCER2I3L3R5 266 aa14.5□□□□□ -0.09
HS1BP3-202ENST00000402541 DNTTIP2Q5QJE6 756 aaKnown RBP14.5□□□□□ -0.09
HS1BP3-202ENST00000402541 DNAJC5Q9H3Z4 198 aa14.5□□□□□ -0.09
HS1BP3-202ENST00000402541 MAP3K1Q13233 1512 aa14.5□□□□□ -0.09
HS1BP3-202ENST00000402541 MYOM3Q5VTT5 1437 aa14.5□□□□□ -0.09
HS1BP3-202ENST00000402541 DHX57Q6P158 1386 aaKnown RBP14.49□□□□□ -0.09
HS1BP3-202ENST00000402541 SPRYD3Q8NCJ5 442 aa14.48□□□□□ -0.09
HS1BP3-202ENST00000402541 ASXL2Q76L83 1435 aa14.47□□□□□ -0.09
HS1BP3-202ENST00000402541 FGD6Q6ZV73 1430 aa14.47□□□□□ -0.09
HS1BP3-202ENST00000402541 IPO8O15397 1037 aaKnown RBP14.46□□□□□ -0.09
HS1BP3-202ENST00000402541 NGDNQ8NEJ9 315 aaKnown RBP14.46□□□□□ -0.09
HS1BP3-202ENST00000402541 SHROOM2Q13796 1616 aa14.46□□□□□ -0.1
HS1BP3-202ENST00000402541 TRAK1Q9UPV9 953 aa14.45□□□□□ -0.1
HS1BP3-202ENST00000402541 SUPT6HQ7KZ85 1726 aaKnown RBP14.45□□□□□ -0.1
HS1BP3-202ENST00000402541 ABCA8O94911 1581 aa14.45□□□□□ -0.1
HS1BP3-202ENST00000402541 ISY1Q9ULR0 285 aaKnown RBP14.45□□□□□ -0.1
HS1BP3-202ENST00000402541 GOLGA6L4A6NEF3 574 aa14.45□□□□□ -0.1
HS1BP3-202ENST00000402541 PKNOX2Q96KN3 472 aa14.45□□□□□ -0.1
HS1BP3-202ENST00000402541 RCAN3Q9UKA8 241 aa14.45□□□□□ -0.1
HS1BP3-202ENST00000402541 CLUAP1Q96AJ1 413 aa14.45□□□□□ -0.1
HS1BP3-202ENST00000402541 NOP58Q9Y2X3 529 aaKnown RBP14.45□□□□□ -0.1
HS1BP3-202ENST00000402541 ARHGAP5Q13017 1502 aa14.44□□□□□ -0.1
HS1BP3-202ENST00000402541 PODXL2Q9NZ53 605 aa14.44□□□□□ -0.1
HS1BP3-202ENST00000402541 LTV1Q96GA3 475 aaPredicted RBP14.44□□□□□ -0.1
HS1BP3-202ENST00000402541 CCDC9Q9Y3X0 531 aaKnown RBP14.44□□□□□ -0.1
HS1BP3-202ENST00000402541 ITPRIPQ8IWB1 547 aa14.43□□□□□ -0.1
HS1BP3-202ENST00000402541 TERF2IPQ9NYB0 399 aa14.43□□□□□ -0.1
HS1BP3-202ENST00000402541 KIF14Q15058 1648 aa14.43□□□□□ -0.1
HS1BP3-202ENST00000402541 HSCBQ8IWL3 235 aa14.43□□□□□ -0.1
HS1BP3-202ENST00000402541 EID1Q9Y6B2 187 aa14.43□□□□□ -0.1
HS1BP3-202ENST00000402541 WDR7Q9Y4E6 1490 aa14.42□□□□□ -0.1
HS1BP3-202ENST00000402541 UHRF1BP1LA0JNW5 1464 aa14.42□□□□□ -0.1
HS1BP3-202ENST00000402541 RALBP1Q15311 655 aa14.42□□□□□ -0.1
HS1BP3-202ENST00000402541 CD109Q6YHK3 1445 aa14.42□□□□□ -0.1
HS1BP3-202ENST00000402541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.42□□□□□ -0.1
HS1BP3-202ENST00000402541 CCDC146Q8IYE0 955 aa14.41□□□□□ -0.1
HS1BP3-202ENST00000402541 STK31Q9BXU1 1019 aa14.4□□□□□ -0.1
HS1BP3-202ENST00000402541 RIMBP3CA6NJZ7 1639 aa14.39□□□□□ -0.11
HS1BP3-202ENST00000402541 RIMBP3BA6NNM3 1639 aa14.39□□□□□ -0.11
HS1BP3-202ENST00000402541 RIMBP3Q9UFD9 1639 aa14.39□□□□□ -0.11
HS1BP3-202ENST00000402541 CALD1Q05682 793 aaKnown RBP14.39□□□□□ -0.11
HS1BP3-202ENST00000402541 KDM5BQ9UGL1 1544 aa14.39□□□□□ -0.11
HS1BP3-202ENST00000402541 MIA2Q96PC5 1412 aa14.39□□□□□ -0.11
HS1BP3-202ENST00000402541 ST20-MTHFSA0A0A6YYL1 179 aa14.39□□□□□ -0.11
HS1BP3-202ENST00000402541 MCCP23508 829 aa14.38□□□□□ -0.11
HS1BP3-202ENST00000402541 AMPHP49418 695 aa14.38□□□□□ -0.11
HS1BP3-202ENST00000402541 SMC4Q9NTJ3 1288 aa14.38□□□□□ -0.11
HS1BP3-202ENST00000402541 ERICH6BQ5W0A0 696 aa14.38□□□□□ -0.11
HS1BP3-202ENST00000402541 SLC4A10Q6U841 1118 aa14.38□□□□□ -0.11
HS1BP3-202ENST00000402541 KIAA1211Q6ZU35 1233 aa14.38□□□□□ -0.11
HS1BP3-202ENST00000402541 NLRP13Q86W25 1043 aa14.38□□□□□ -0.11
HS1BP3-202ENST00000402541 AFAP1Q8N556 730 aa14.37□□□□□ -0.11
HS1BP3-202ENST00000402541 CFAP43Q8NDM7 1665 aa14.37□□□□□ -0.11
HS1BP3-202ENST00000402541 CHMP3Q9Y3E7 222 aa14.37□□□□□ -0.11
HS1BP3-202ENST00000402541 RWDD1Q9H446 243 aaPredicted RBP14.35□□□□□ -0.11
HS1BP3-202ENST00000402541 ELL2O00472 640 aaPredicted RBP14.35□□□□□ -0.11
HS1BP3-202ENST00000402541 RRP7AQ9Y3A4 280 aaKnown RBP14.35□□□□□ -0.11
HS1BP3-202ENST00000402541 RRBP1Q9P2E9 1410 aaKnown RBP14.34□□□□□ -0.11
HS1BP3-202ENST00000402541 SLKQ9H2G2 1235 aaPredicted RBP14.34□□□□□ -0.11
HS1BP3-202ENST00000402541 GORABQ5T7V8 394 aa14.34□□□□□ -0.11
HS1BP3-202ENST00000402541 GPATCH8Q9UKJ3 1502 aaKnown RBP14.33□□□□□ -0.11
HS1BP3-202ENST00000402541 PLEKHH2Q8IVE3 1493 aa14.33□□□□□ -0.12
HS1BP3-202ENST00000402541 SCAPERQ9BY12 1400 aa14.33□□□□□ -0.12
HS1BP3-202ENST00000402541 CCDC144AA2RUR9 1427 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms