RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 FANCIQ9NVI1 1328 aa13.72□□□□□ -0.21
CACNA1C-216ENST00000399638 CHMP4AQ9BY43 222 aa13.72□□□□□ -0.21
CACNA1C-216ENST00000399638 MSNP26038 577 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-216ENST00000399638 CCDC43Q96MW1 224 aaKnown RBP13.72□□□□□ -0.21
CACNA1C-216ENST00000399638 VSIG10Q8N0Z9 540 aa13.71□□□□□ -0.21
CACNA1C-216ENST00000399638 U2AF1L5P0DN76 240 aaPredicted RBP13.71□□□□□ -0.21
CACNA1C-216ENST00000399638 U2AF1Q01081 240 aaKnown RBP eCLIP13.71□□□□□ -0.21
CACNA1C-216ENST00000399638 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.22
CACNA1C-216ENST00000399638 WASHC2AQ641Q2 1341 aa13.7□□□□□ -0.22
CACNA1C-216ENST00000399638 PAF1Q8N7H5 531 aa13.7□□□□□ -0.22
CACNA1C-216ENST00000399638 TRIM6-TRIM34B2RNG4 842 aa13.69□□□□□ -0.22
CACNA1C-216ENST00000399638 SLC4A3P48751 1232 aa13.69□□□□□ -0.22
CACNA1C-216ENST00000399638 OSCARQ8IYS5 282 aa13.69□□□□□ -0.22
CACNA1C-216ENST00000399638 FAM69CQ0P6D2 419 aa13.69□□□□□ -0.22
CACNA1C-216ENST00000399638 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.69□□□□□ -0.221e-7■■■■■ 115.4
CACNA1C-216ENST00000399638 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
CACNA1C-216ENST00000399638 PES1O00541 588 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-216ENST00000399638 TMEM132AQ24JP5 1023 aa13.67□□□□□ -0.22
CACNA1C-216ENST00000399638 DHX37Q8IY37 1157 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-216ENST00000399638 GOLGA6L1Q8N7Z2 621 aa13.67□□□□□ -0.22
CACNA1C-216ENST00000399638 AK7Q96M32 723 aa13.67□□□□□ -0.22
CACNA1C-216ENST00000399638 AKAP17AQ02040 695 aaKnown RBP13.67□□□□□ -0.22
CACNA1C-216ENST00000399638 CCDC34Q96HJ3 373 aa13.67□□□□□ -0.22
CACNA1C-216ENST00000399638 HDAC5Q9UQL6 1122 aa13.67□□□□□ -0.22
CACNA1C-216ENST00000399638 TOP2AP11388 1531 aaKnown RBP13.66□□□□□ -0.22
CACNA1C-216ENST00000399638 KIF27Q86VH2 1401 aa13.66□□□□□ -0.22
CACNA1C-216ENST00000399638 TERF2IPQ9NYB0 399 aa13.66□□□□□ -0.22
CACNA1C-216ENST00000399638 WWC2Q6AWC2 1192 aa13.66□□□□□ -0.22
CACNA1C-216ENST00000399638 R3HCC1Q9Y3T6 440 aaKnown RBP13.65□□□□□ -0.22
CACNA1C-216ENST00000399638 SOGA1O94964 1423 aa13.65□□□□□ -0.22
CACNA1C-216ENST00000399638 HSCBQ8IWL3 235 aa13.64□□□□□ -0.23
CACNA1C-216ENST00000399638 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
CACNA1C-216ENST00000399638 PPM1FP49593 454 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-216ENST00000399638 IBSPP21815 317 aaPredicted RBP13.64□□□□□ -0.23
CACNA1C-216ENST00000399638 ITPRIPQ8IWB1 547 aa13.64□□□□□ -0.23
CACNA1C-216ENST00000399638 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
CACNA1C-216ENST00000399638 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
CACNA1C-216ENST00000399638 DEKP35659 375 aaKnown RBP13.63□□□□□ -0.23
CACNA1C-216ENST00000399638 IKQ13123 557 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-216ENST00000399638 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
CACNA1C-216ENST00000399638 SETD5Q9C0A6 1442 aa13.63□□□□□ -0.23
CACNA1C-216ENST00000399638 BCL11BQ9C0K0 894 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-216ENST00000399638 CECR2Q9BXF3 1484 aa13.63□□□□□ -0.23
CACNA1C-216ENST00000399638 TPM4P67936 248 aa13.63□□□□□ -0.23
CACNA1C-216ENST00000399638 SETQ01105 290 aaPredicted RBP13.63□□□□□ -0.23
CACNA1C-216ENST00000399638 FYB1O15117 783 aa13.62□□□□□ -0.23
CACNA1C-216ENST00000399638 HTATSF1O43719 755 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-216ENST00000399638 WDR70Q9NW82 654 aa13.62□□□□□ -0.23
CACNA1C-216ENST00000399638 DHX57Q6P158 1386 aaKnown RBP13.62□□□□□ -0.23
CACNA1C-216ENST00000399638 FAM177BA6PVY3 158 aa13.61□□□□□ -0.23
CACNA1C-216ENST00000399638 TEFQ10587 303 aa13.61□□□□□ -0.23
CACNA1C-216ENST00000399638 GZF1Q9H116 711 aaPredicted RBP13.61□□□□□ -0.23
CACNA1C-216ENST00000399638 STRN4Q9NRL3 753 aa13.61□□□□□ -0.23
CACNA1C-216ENST00000399638 CCDC88BA6NC98 1476 aa13.6□□□□□ -0.23
CACNA1C-216ENST00000399638 B4GALNT3Q6L9W6 998 aa13.6□□□□□ -0.23
CACNA1C-216ENST00000399638 TPD52L1Q16890 204 aaPredicted RBP13.6□□□□□ -0.23
CACNA1C-216ENST00000399638 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
CACNA1C-216ENST00000399638 SYNE3Q6ZMZ3 975 aa13.59□□□□□ -0.23
CACNA1C-216ENST00000399638 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
CACNA1C-216ENST00000399638 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
CACNA1C-216ENST00000399638 NOL8Q76FK4 1167 aaKnown RBP13.58□□□□□ -0.24
CACNA1C-216ENST00000399638 HNRNPMP52272 730 aaKnown RBP eCLIP13.58□□□□□ -0.24
CACNA1C-216ENST00000399638 CCDC27Q2M243 656 aa13.57□□□□□ -0.24
CACNA1C-216ENST00000399638 CCAR2Q8N163 923 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-216ENST00000399638 MTMR7Q9Y216 660 aa13.57□□□□□ -0.24
CACNA1C-216ENST00000399638 RRP12Q5JTH9 1297 aaKnown RBP13.57□□□□□ -0.24
CACNA1C-216ENST00000399638 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
CACNA1C-216ENST00000399638 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-216ENST00000399638 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
CACNA1C-216ENST00000399638 NEXNQ0ZGT2 675 aa13.56□□□□□ -0.24
CACNA1C-216ENST00000399638 COG3Q96JB2 828 aa13.56□□□□□ -0.24
CACNA1C-216ENST00000399638 TRAK1Q9UPV9 953 aa13.56□□□□□ -0.24
CACNA1C-216ENST00000399638 PKD2Q13563 968 aa13.55□□□□□ -0.24
CACNA1C-216ENST00000399638 EIF3AQ14152 1382 aaKnown RBP13.55□□□□□ -0.24
CACNA1C-216ENST00000399638 HMMRO75330 724 aa13.54□□□□□ -0.24
CACNA1C-216ENST00000399638 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
CACNA1C-216ENST00000399638 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
CACNA1C-216ENST00000399638 SF3A1Q15459 793 aaKnown RBP13.54□□□□□ -0.24
CACNA1C-216ENST00000399638 NLRP2Q9NX02 1062 aa13.54□□□□□ -0.24
CACNA1C-216ENST00000399638 TPM2P07951 284 aa13.53□□□□□ -0.24
CACNA1C-216ENST00000399638 RBM5P52756 815 aaKnown RBP eCLIP13.53□□□□□ -0.24
CACNA1C-216ENST00000399638 RAPGEF4Q8WZA2 1011 aa13.53□□□□□ -0.24
CACNA1C-216ENST00000399638 NUTM2GQ5VZR2 741 aa13.53□□□□□ -0.24
CACNA1C-216ENST00000399638 RBM42Q9BTD8 480 aaKnown RBP13.53□□□□□ -0.24
CACNA1C-216ENST00000399638 PLIN1O60240 522 aa13.53□□□□□ -0.24
CACNA1C-216ENST00000399638 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
CACNA1C-216ENST00000399638 WDHD1O75717 1129 aaPredicted RBP13.52□□□□□ -0.24
CACNA1C-216ENST00000399638 GRM1Q13255 1194 aa13.52□□□□□ -0.25
CACNA1C-216ENST00000399638 PROSER2Q86WR7 435 aaPredicted RBP13.52□□□□□ -0.25
CACNA1C-216ENST00000399638 TMEM87AQ8NBN3 555 aa13.52□□□□□ -0.25
CACNA1C-216ENST00000399638 C16orf71Q8IYS4 520 aaPredicted RBP13.51□□□□□ -0.25
CACNA1C-216ENST00000399638 CUX2O14529 1486 aa13.51□□□□□ -0.25
CACNA1C-216ENST00000399638 SKIDA1Q1XH10 827 aa13.51□□□□□ -0.25
CACNA1C-216ENST00000399638 TTLL12Q14166 644 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-216ENST00000399638 FOXD4L5Q5VV16 416 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-216ENST00000399638 FOXD4L4Q8WXT5 416 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-216ENST00000399638 PCMTD1Q96MG8 357 aaPredicted RBP13.5□□□□□ -0.25
CACNA1C-216ENST00000399638 FOXD4L1Q9NU39 408 aa13.5□□□□□ -0.25
CACNA1C-216ENST00000399638 PDE3BQ13370 1112 aa13.5□□□□□ -0.25
CACNA1C-216ENST00000399638 SMC4Q9NTJ3 1288 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms