RNA–Protein interactions for RNA: ENST00000399367.7

ITSN1-212, Transcript of intersectin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITSN1, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-212ENST00000399367 CCDC18Q5T9S5 1454 aa18.74■□□□□ 0.59
ITSN1-212ENST00000399367 AEBP2Q6ZN18 517 aaPredicted RBP18.73■□□□□ 0.59
ITSN1-212ENST00000399367 MFAP1P55081 439 aaKnown RBP18.73■□□□□ 0.59
ITSN1-212ENST00000399367 OSCARQ8IYS5 282 aa18.73■□□□□ 0.59
ITSN1-212ENST00000399367 NOL8Q76FK4 1167 aaKnown RBP18.72■□□□□ 0.59
ITSN1-212ENST00000399367 CHAF1AQ13111 956 aaPredicted RBP18.72■□□□□ 0.59
ITSN1-212ENST00000399367 SLKQ9H2G2 1235 aaPredicted RBP18.72■□□□□ 0.59
ITSN1-212ENST00000399367 COG3Q96JB2 828 aa18.71■□□□□ 0.59
ITSN1-212ENST00000399367 RAPGEF2Q9Y4G8 1499 aa18.71■□□□□ 0.59
ITSN1-212ENST00000399367 C1orf141Q5JVX7 400 aa18.71■□□□□ 0.59
ITSN1-212ENST00000399367 PMFBP1Q8TBY8 1022 aa18.71■□□□□ 0.59
ITSN1-212ENST00000399367 NGEFQ8N5V2 710 aa18.7■□□□□ 0.58
ITSN1-212ENST00000399367 MINK1Q8N4C8 1332 aaPredicted RBP18.7■□□□□ 0.58
ITSN1-212ENST00000399367 VGFO15240 615 aaPredicted RBP18.7■□□□□ 0.58
ITSN1-212ENST00000399367 RASSF8Q8NHQ8 419 aa18.7■□□□□ 0.58
ITSN1-212ENST00000399367 NLRP13Q86W25 1043 aa18.69■□□□□ 0.58
ITSN1-212ENST00000399367 CENPJQ9HC77 1338 aaPredicted RBP18.69■□□□□ 0.58
ITSN1-212ENST00000399367 PTPRGP23470 1445 aa18.69■□□□□ 0.58
ITSN1-212ENST00000399367 ST20-MTHFSA0A0A6YYL1 179 aa18.69■□□□□ 0.58
ITSN1-212ENST00000399367 MSNP26038 577 aaKnown RBP18.68■□□□□ 0.58
ITSN1-212ENST00000399367 SYTL4Q96C24 671 aaPredicted RBP18.68■□□□□ 0.58
ITSN1-212ENST00000399367 HTATSF1O43719 755 aaKnown RBP18.67■□□□□ 0.58
ITSN1-212ENST00000399367 KIAA2012Q0VF49 1180 aa18.67■□□□□ 0.58
ITSN1-212ENST00000399367 PANK3Q9H999 370 aa18.67■□□□□ 0.58
ITSN1-212ENST00000399367 GZF1Q9H116 711 aaPredicted RBP18.67■□□□□ 0.58
ITSN1-212ENST00000399367 CCDC144AA2RUR9 1427 aa18.67■□□□□ 0.58
ITSN1-212ENST00000399367 VPS53Q5VIR6 699 aa18.67■□□□□ 0.58
ITSN1-212ENST00000399367 TEFQ10587 303 aa18.66■□□□□ 0.58
ITSN1-212ENST00000399367 MEX3CQ5U5Q3 659 aaKnown RBP18.66■□□□□ 0.58
ITSN1-212ENST00000399367 GBP4Q96PP9 640 aa18.66■□□□□ 0.58
ITSN1-212ENST00000399367 FAM69CQ0P6D2 419 aa18.64■□□□□ 0.57
ITSN1-212ENST00000399367 BCL2L13Q9BXK5 485 aa18.64■□□□□ 0.57
ITSN1-212ENST00000399367 L1TD1Q5T7N2 865 aaKnown RBP18.63■□□□□ 0.57
ITSN1-212ENST00000399367 CREBRFQ8IUR6 639 aa18.63■□□□□ 0.57
ITSN1-212ENST00000399367 TTC5Q8N0Z6 440 aa18.63■□□□□ 0.57
ITSN1-212ENST00000399367 FOXD4L1Q9NU39 408 aa18.63■□□□□ 0.57
ITSN1-212ENST00000399367 PSME1Q06323 249 aa18.63■□□□□ 0.57
ITSN1-212ENST00000399367 EVC2Q86UK5 1308 aa18.63■□□□□ 0.57
ITSN1-212ENST00000399367 MARCH6O60337 910 aa18.63■□□□□ 0.57
ITSN1-212ENST00000399367 EIF2S2P20042 333 aaKnown RBP18.63■□□□□ 0.57
ITSN1-212ENST00000399367 PDE4CQ08493 712 aa18.62■□□□□ 0.57
ITSN1-212ENST00000399367 TSHZ2Q9NRE2 1034 aa18.6■□□□□ 0.57
ITSN1-212ENST00000399367 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
ITSN1-212ENST00000399367 CCDC34Q96HJ3 373 aa18.6■□□□□ 0.57
ITSN1-212ENST00000399367 NECTIN2Q92692 538 aa18.58■□□□□ 0.57
ITSN1-212ENST00000399367 RILPL2Q969X0 211 aa18.58■□□□□ 0.57
ITSN1-212ENST00000399367 TCERG1O14776 1098 aaKnown RBP18.57■□□□□ 0.56
ITSN1-212ENST00000399367 UACAQ9BZF9 1416 aa18.57■□□□□ 0.56
ITSN1-212ENST00000399367 RAD21O60216 631 aa18.57■□□□□ 0.56
ITSN1-212ENST00000399367 PRM3Q9NNZ6 103 aa18.57■□□□□ 0.56
ITSN1-212ENST00000399367 KLHL34Q8N239 644 aa18.56■□□□□ 0.56
ITSN1-212ENST00000399367 NOC3LQ8WTT2 800 aaKnown RBP18.56■□□□□ 0.56
ITSN1-212ENST00000399367 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
ITSN1-212ENST00000399367 FOXD4L5Q5VV16 416 aaPredicted RBP18.55■□□□□ 0.56
ITSN1-212ENST00000399367 FOXD4L4Q8WXT5 416 aaPredicted RBP18.55■□□□□ 0.56
ITSN1-212ENST00000399367 SYAP1Q96A49 352 aaPredicted RBP18.55■□□□□ 0.56
ITSN1-212ENST00000399367 TPM4P67936 248 aa18.55■□□□□ 0.56
ITSN1-212ENST00000399367 KIF15Q9NS87 1388 aa18.54■□□□□ 0.56
ITSN1-212ENST00000399367 KIF16BQ96L93 1317 aa18.54■□□□□ 0.56
ITSN1-212ENST00000399367 C9orf78Q9NZ63 289 aaPredicted RBP18.54■□□□□ 0.56
ITSN1-212ENST00000399367 FANCD2Q9BXW9 1451 aa18.53■□□□□ 0.56
ITSN1-212ENST00000399367 PDE3BQ13370 1112 aa18.53■□□□□ 0.56
ITSN1-212ENST00000399367 WIZO95785 1651 aa18.53■□□□□ 0.56
ITSN1-212ENST00000399367 SF3A1Q15459 793 aaKnown RBP18.53■□□□□ 0.56
ITSN1-212ENST00000399367 MYBBP1AQ9BQG0 1328 aaKnown RBP18.53■□□□□ 0.56
ITSN1-212ENST00000399367 ANKRD45Q5TZF3 282 aa18.52■□□□□ 0.56
ITSN1-212ENST00000399367 ATF3P18847 181 aa18.52■□□□□ 0.55
ITSN1-212ENST00000399367 FBXW7Q969H0 707 aa18.51■□□□□ 0.55
ITSN1-212ENST00000399367 TOP2AP11388 1531 aaKnown RBP18.51■□□□□ 0.55
ITSN1-212ENST00000399367 PHLDB1Q86UU1 1377 aa18.51■□□□□ 0.55
ITSN1-212ENST00000399367 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
ITSN1-212ENST00000399367 PTMSP20962 102 aa18.51■□□□□ 0.55
ITSN1-212ENST00000399367 ANO8Q9HCE9 1232 aaPredicted RBP18.51■□□□□ 0.55
ITSN1-212ENST00000399367 ST18O60284 1047 aa18.49■□□□□ 0.55
ITSN1-212ENST00000399367 TRIM34Q9BYJ4 488 aa18.49■□□□□ 0.55
ITSN1-212ENST00000399367 NOL10Q9BSC4 688 aaKnown RBP18.49■□□□□ 0.55
ITSN1-212ENST00000399367 DIAPH1O60610 1272 aaKnown RBP18.49■□□□□ 0.55
ITSN1-212ENST00000399367 NUTM2GQ5VZR2 741 aa18.49■□□□□ 0.55
ITSN1-212ENST00000399367 KIF3AQ9Y496 699 aa18.48■□□□□ 0.55
ITSN1-212ENST00000399367 PLIN1O60240 522 aa18.48■□□□□ 0.55
ITSN1-212ENST00000399367 VPS37DQ86XT2 251 aa18.48■□□□□ 0.55
ITSN1-212ENST00000399367 AKAP17AQ02040 695 aaKnown RBP18.48■□□□□ 0.55
ITSN1-212ENST00000399367 ATAD2BQ9ULI0 1458 aa18.48■□□□□ 0.55
ITSN1-212ENST00000399367 CSPP1Q1MSJ5 1256 aa18.47■□□□□ 0.55
ITSN1-212ENST00000399367 ZKSCAN2Q63HK3 967 aa18.47■□□□□ 0.55
ITSN1-212ENST00000399367 H3BQV1 296 aa18.47■□□□□ 0.55
ITSN1-212ENST00000399367 APAF1O14727 1248 aa18.47■□□□□ 0.55
ITSN1-212ENST00000399367 IFFO2Q5TF58 517 aa18.47■□□□□ 0.55
ITSN1-212ENST00000399367 PES1O00541 588 aaKnown RBP18.46■□□□□ 0.55
ITSN1-212ENST00000399367 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.46■□□□□ 0.55
ITSN1-212ENST00000399367 APPP05067 770 aa18.45■□□□□ 0.54
ITSN1-212ENST00000399367 CTDP1Q9Y5B0 961 aaPredicted RBP18.45■□□□□ 0.54
ITSN1-212ENST00000399367 FAM184AQ8NB25 1140 aa18.45■□□□□ 0.54
ITSN1-212ENST00000399367 RAPGEF4Q8WZA2 1011 aa18.45■□□□□ 0.54
ITSN1-212ENST00000399367 AMOTL1Q8IY63 956 aa18.45■□□□□ 0.54
ITSN1-212ENST00000399367 NLRP2Q9NX02 1062 aa18.45■□□□□ 0.54
ITSN1-212ENST00000399367 RIPK4P57078 832 aa18.44■□□□□ 0.54
ITSN1-212ENST00000399367 IPO9Q96P70 1041 aaKnown RBP18.44■□□□□ 0.54
ITSN1-212ENST00000399367 DIAPH3Q9NSV4 1193 aa18.44■□□□□ 0.54
ITSN1-212ENST00000399367 FOXD4L6Q3SYB3 417 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms