RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
PCDHGA11-201ENST00000398587 PRG4Q92954 1404 aaPredicted RBP18.1■□□□□ 0.49
PCDHGA11-201ENST00000398587 KIF7Q2M1P5 1343 aa18.1■□□□□ 0.49
PCDHGA11-201ENST00000398587 CFAP44Q96MT7 982 aa18.1■□□□□ 0.49
PCDHGA11-201ENST00000398587 CENPJQ9HC77 1338 aaPredicted RBP18.09■□□□□ 0.49
PCDHGA11-201ENST00000398587 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.49
PCDHGA11-201ENST00000398587 TROQ12816 1431 aaPredicted RBP18.08■□□□□ 0.48
PCDHGA11-201ENST00000398587 PEG3Q9GZU2 1588 aa18.08■□□□□ 0.48
PCDHGA11-201ENST00000398587 CGNL1Q0VF96 1302 aa18.08■□□□□ 0.48
PCDHGA11-201ENST00000398587 ITPRIPQ8IWB1 547 aa18.08■□□□□ 0.48
PCDHGA11-201ENST00000398587 HFM1A2PYH4 1435 aa18.08■□□□□ 0.48
PCDHGA11-201ENST00000398587 SMC4Q9NTJ3 1288 aa18.07■□□□□ 0.48
PCDHGA11-201ENST00000398587 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
PCDHGA11-201ENST00000398587 TSHZ2Q9NRE2 1034 aa18.07■□□□□ 0.48
PCDHGA11-201ENST00000398587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.06■□□□□ 0.48
PCDHGA11-201ENST00000398587 TRIM44Q96DX7 344 aaPredicted RBP18.06■□□□□ 0.48
PCDHGA11-201ENST00000398587 CHMP4AQ9BY43 222 aa18.06■□□□□ 0.48
PCDHGA11-201ENST00000398587 LMOD3Q0VAK6 560 aa18.05■□□□□ 0.48
PCDHGA11-201ENST00000398587 HSCBQ8IWL3 235 aa18.05■□□□□ 0.48
PCDHGA11-201ENST00000398587 NGDNQ8NEJ9 315 aaKnown RBP18.05■□□□□ 0.48
PCDHGA11-201ENST00000398587 CNTLNQ9NXG0 1405 aa18.04■□□□□ 0.48
PCDHGA11-201ENST00000398587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.04■□□□□ 0.48
PCDHGA11-201ENST00000398587 SNAPC4Q5SXM2 1469 aa18.04■□□□□ 0.48
PCDHGA11-201ENST00000398587 AFAP1Q8N556 730 aa18.03■□□□□ 0.48
PCDHGA11-201ENST00000398587 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
PCDHGA11-201ENST00000398587 HECW1Q76N89 1606 aa18.02■□□□□ 0.48
PCDHGA11-201ENST00000398587 WASHC2AQ641Q2 1341 aa18.02■□□□□ 0.48
PCDHGA11-201ENST00000398587 NGEFQ8N5V2 710 aa18.02■□□□□ 0.47
PCDHGA11-201ENST00000398587 KIAA0586Q9BVV6 1533 aa18.01■□□□□ 0.47
PCDHGA11-201ENST00000398587 LAMC3Q9Y6N6 1575 aa18.01■□□□□ 0.47
PCDHGA11-201ENST00000398587 KCNJ4P48050 445 aa18.01■□□□□ 0.47
PCDHGA11-201ENST00000398587 CLUAP1Q96AJ1 413 aa18.01■□□□□ 0.47
PCDHGA11-201ENST00000398587 STK31Q9BXU1 1019 aa18■□□□□ 0.47
PCDHGA11-201ENST00000398587 E9PSI1 815 aa18■□□□□ 0.47
PCDHGA11-201ENST00000398587 C9orf84Q5VXU9 1444 aa17.99■□□□□ 0.47
PCDHGA11-201ENST00000398587 MINK1Q8N4C8 1332 aaPredicted RBP17.99■□□□□ 0.47
PCDHGA11-201ENST00000398587 RRP7AQ9Y3A4 280 aaKnown RBP17.99■□□□□ 0.47
PCDHGA11-201ENST00000398587 MCCP23508 829 aa17.98■□□□□ 0.47
PCDHGA11-201ENST00000398587 AMPHP49418 695 aa17.98■□□□□ 0.47
PCDHGA11-201ENST00000398587 KIAA1107Q9UPP5 1409 aa17.98■□□□□ 0.47
PCDHGA11-201ENST00000398587 NUTM2FA1L443 756 aa17.97■□□□□ 0.47
PCDHGA11-201ENST00000398587 RRP1P56182 461 aaKnown RBP17.97■□□□□ 0.47
PCDHGA11-201ENST00000398587 APAF1O14727 1248 aa17.97■□□□□ 0.47
PCDHGA11-201ENST00000398587 PLEKHH2Q8IVE3 1493 aa17.97■□□□□ 0.47
PCDHGA11-201ENST00000398587 FAM69CQ0P6D2 419 aa17.97■□□□□ 0.47
PCDHGA11-201ENST00000398587 APBB1O00213 710 aa17.96■□□□□ 0.47
PCDHGA11-201ENST00000398587 FGD1P98174 961 aa17.96■□□□□ 0.47
PCDHGA11-201ENST00000398587 CSB-PGBD3P0DP91 1061 aa17.95■□□□□ 0.46
PCDHGA11-201ENST00000398587 COG3Q96JB2 828 aa17.95■□□□□ 0.46
PCDHGA11-201ENST00000398587 EPRSP07814 1512 aaKnown RBP17.95■□□□□ 0.46
PCDHGA11-201ENST00000398587 SUPT6HQ7KZ85 1726 aaKnown RBP17.95■□□□□ 0.46
PCDHGA11-201ENST00000398587 DAPK1P53355 1430 aa17.94■□□□□ 0.46
PCDHGA11-201ENST00000398587 ZRSR1Q15695 479 aaKnown RBP17.94■□□□□ 0.46
PCDHGA11-201ENST00000398587 MAP3K1Q13233 1512 aa17.93■□□□□ 0.46
PCDHGA11-201ENST00000398587 HMMRO75330 724 aa17.92■□□□□ 0.46
PCDHGA11-201ENST00000398587 CUL7Q14999 1698 aa17.92■□□□□ 0.46
PCDHGA11-201ENST00000398587 NAIPQ13075 1403 aa17.92■□□□□ 0.46
PCDHGA11-201ENST00000398587 IQGAP2Q13576 1575 aa17.92■□□□□ 0.46
PCDHGA11-201ENST00000398587 NBPF8Q3BBV2 869 aa17.91■□□□□ 0.46
PCDHGA11-201ENST00000398587 CENPQQ7L2Z9 268 aaPredicted RBP17.91■□□□□ 0.46
PCDHGA11-201ENST00000398587 EXOC6Q8TAG9 804 aa17.91■□□□□ 0.46
PCDHGA11-201ENST00000398587 HDAC5Q9UQL6 1122 aa17.91■□□□□ 0.46
PCDHGA11-201ENST00000398587 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.91■□□□□ 0.46
PCDHGA11-201ENST00000398587 PTMAP06454 111 aaKnown RBP17.91■□□□□ 0.46
PCDHGA11-201ENST00000398587 BRD4O60885 1362 aaPredicted RBP17.9■□□□□ 0.46
PCDHGA11-201ENST00000398587 PLIN1O60240 522 aa17.9■□□□□ 0.46
PCDHGA11-201ENST00000398587 IPO9Q96P70 1041 aaKnown RBP17.9■□□□□ 0.46
PCDHGA11-201ENST00000398587 ROCK1Q13464 1354 aa17.89■□□□□ 0.46
PCDHGA11-201ENST00000398587 PCF11O94913 1555 aaKnown RBP17.89■□□□□ 0.45
PCDHGA11-201ENST00000398587 CDK13Q14004 1512 aaKnown RBP17.89■□□□□ 0.45
PCDHGA11-201ENST00000398587 DIAPH1O60610 1272 aaKnown RBP17.88■□□□□ 0.45
PCDHGA11-201ENST00000398587 ZKSCAN2Q63HK3 967 aa17.88■□□□□ 0.45
PCDHGA11-201ENST00000398587 CFAP70Q5T0N1 1121 aa17.88■□□□□ 0.45
PCDHGA11-201ENST00000398587 NPHP1O15259 732 aa17.87■□□□□ 0.45
PCDHGA11-201ENST00000398587 KIAA1211Q6ZU35 1233 aa17.87■□□□□ 0.45
PCDHGA11-201ENST00000398587 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
PCDHGA11-201ENST00000398587 TPRNQ4KMQ1 711 aa17.87■□□□□ 0.45
PCDHGA11-201ENST00000398587 SPRYD3Q8NCJ5 442 aa17.87■□□□□ 0.45
PCDHGA11-201ENST00000398587 BCL2L13Q9BXK5 485 aa17.87■□□□□ 0.45
PCDHGA11-201ENST00000398587 CRBNQ96SW2 442 aa17.87■□□□□ 0.45
PCDHGA11-201ENST00000398587 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
PCDHGA11-201ENST00000398587 SLC4A10Q6U841 1118 aa17.86■□□□□ 0.45
PCDHGA11-201ENST00000398587 NBPF1Q3BBV0 1214 aa17.86■□□□□ 0.45
PCDHGA11-201ENST00000398587 BIVM-ERCC5R4GMW8 1640 aa17.86■□□□□ 0.45
PCDHGA11-201ENST00000398587 RUNDC1Q96C34 613 aa17.85■□□□□ 0.45
PCDHGA11-201ENST00000398587 TMEM132EQ6IEE7 984 aa17.84■□□□□ 0.45
PCDHGA11-201ENST00000398587 MFAP1P55081 439 aaKnown RBP17.84■□□□□ 0.45
PCDHGA11-201ENST00000398587 SCAPERQ9BY12 1400 aa17.83■□□□□ 0.44
PCDHGA11-201ENST00000398587 ELL2O00472 640 aaPredicted RBP17.83■□□□□ 0.44
PCDHGA11-201ENST00000398587 SLKQ9H2G2 1235 aaPredicted RBP17.83■□□□□ 0.44
PCDHGA11-201ENST00000398587 COG6Q9Y2V7 657 aa17.83■□□□□ 0.44
PCDHGA11-201ENST00000398587 UNC13AQ9UPW8 1703 aa17.82■□□□□ 0.44
PCDHGA11-201ENST00000398587 NAP1L2Q9ULW6 460 aaPredicted RBP17.82■□□□□ 0.44
PCDHGA11-201ENST00000398587 GLIPR1L2Q4G1C9 344 aa17.82■□□□□ 0.44
PCDHGA11-201ENST00000398587 URB2Q14146 1524 aaKnown RBP17.81■□□□□ 0.44
PCDHGA11-201ENST00000398587 PDE4AP27815 886 aa17.81■□□□□ 0.44
PCDHGA11-201ENST00000398587 GOLGA6L4A6NEF3 574 aa17.8■□□□□ 0.44
PCDHGA11-201ENST00000398587 GBP4Q96PP9 640 aa17.8■□□□□ 0.44
PCDHGA11-201ENST00000398587 L1TD1Q5T7N2 865 aaKnown RBP17.8■□□□□ 0.44
PCDHGA11-201ENST00000398587 RIPK4P57078 832 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms