RNA–Protein interactions for RNA: ENST00000397968.3

CDH7-202, Transcript of cadherin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH7, Length 12,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7-202ENST00000397968 GOLGA6L19H0YKK7 550 aa12.28□□□□□ -0.44
CDH7-202ENST00000397968 TRIM6-TRIM34B2RNG4 842 aa12.28□□□□□ -0.44
CDH7-202ENST00000397968 MROH2BQ7Z745 1585 aa12.27□□□□□ -0.44
CDH7-202ENST00000397968 STAC3Q96MF2 364 aa12.27□□□□□ -0.45
CDH7-202ENST00000397968 CUX1P39880 1505 aa12.27□□□□□ -0.45
CDH7-202ENST00000397968 PDE4AP27815 886 aa12.27□□□□□ -0.45
CDH7-202ENST00000397968 TSR1Q2NL82 804 aaKnown RBP12.27□□□□□ -0.45
CDH7-202ENST00000397968 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.45
CDH7-202ENST00000397968 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
CDH7-202ENST00000397968 A0A0U1RQG5 324 aaPredicted RBP12.26□□□□□ -0.45
CDH7-202ENST00000397968 DDX49Q9Y6V7 483 aaKnown RBP12.26□□□□□ -0.45
CDH7-202ENST00000397968 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
CDH7-202ENST00000397968 TPM1P09493 284 aa12.26□□□□□ -0.45
CDH7-202ENST00000397968 HSP90B1P14625 803 aaKnown RBP12.25□□□□□ -0.45
CDH7-202ENST00000397968 RRP1P56182 461 aaKnown RBP12.25□□□□□ -0.45
CDH7-202ENST00000397968 L3MBTL2Q969R5 705 aa12.25□□□□□ -0.45
CDH7-202ENST00000397968 MAP7D2Q96T17 732 aa12.25□□□□□ -0.45
CDH7-202ENST00000397968 DDX19BQ9UMR2 479 aa12.24□□□□□ -0.45
CDH7-202ENST00000397968 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.24□□□□□ -0.45
CDH7-202ENST00000397968 DHX57Q6P158 1386 aaKnown RBP12.24□□□□□ -0.45
CDH7-202ENST00000397968 TEX35Q5T0J7 233 aa12.24□□□□□ -0.45
CDH7-202ENST00000397968 PRKRIP1Q9H875 184 aaPredicted RBP12.24□□□□□ -0.45
CDH7-202ENST00000397968 GORABQ5T7V8 394 aa12.23□□□□□ -0.45
CDH7-202ENST00000397968 KANK4Q5T7N3 995 aaPredicted RBP12.23□□□□□ -0.45
CDH7-202ENST00000397968 TPM2P07951 284 aa12.23□□□□□ -0.45
CDH7-202ENST00000397968 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
CDH7-202ENST00000397968 WIZO95785 1651 aa12.23□□□□□ -0.45
CDH7-202ENST00000397968 ZKSCAN2Q63HK3 967 aa12.22□□□□□ -0.45
CDH7-202ENST00000397968 CEP89Q96ST8 783 aa12.22□□□□□ -0.45
CDH7-202ENST00000397968 HOOK1Q9UJC3 728 aaKnown RBP12.22□□□□□ -0.45
CDH7-202ENST00000397968 BECN2A8MW95 431 aa12.21□□□□□ -0.45
CDH7-202ENST00000397968 TAOK2Q9UL54 1235 aa12.21□□□□□ -0.45
CDH7-202ENST00000397968 NUCB2P80303 420 aa12.21□□□□□ -0.46
CDH7-202ENST00000397968 RUFY2Q8WXA3 655 aa12.21□□□□□ -0.46
CDH7-202ENST00000397968 TMX4Q9H1E5 349 aaPredicted RBP12.21□□□□□ -0.46
CDH7-202ENST00000397968 CHMP5Q9NZZ3 219 aa12.21□□□□□ -0.46
CDH7-202ENST00000397968 SF3A1Q15459 793 aaKnown RBP12.2□□□□□ -0.46
CDH7-202ENST00000397968 H3BQV1 296 aa12.2□□□□□ -0.46
CDH7-202ENST00000397968 IFFO2Q5TF58 517 aa12.2□□□□□ -0.46
CDH7-202ENST00000397968 CLSTN1O94985 981 aa12.2□□□□□ -0.46
CDH7-202ENST00000397968 APBB1O00213 710 aa12.19□□□□□ -0.46
CDH7-202ENST00000397968 ZKSCAN1P17029 563 aaPredicted RBP12.19□□□□□ -0.46
CDH7-202ENST00000397968 CPLX2Q6PUV4 134 aaKnown RBP12.19□□□□□ -0.46
CDH7-202ENST00000397968 IPO7O95373 1038 aaKnown RBP12.19□□□□□ -0.46
CDH7-202ENST00000397968 RASSF8Q8NHQ8 419 aa12.18□□□□□ -0.46
CDH7-202ENST00000397968 ISY1Q9ULR0 285 aaKnown RBP12.18□□□□□ -0.46
CDH7-202ENST00000397968 USP47Q96K76 1375 aa12.18□□□□□ -0.46
CDH7-202ENST00000397968 DHX8Q14562 1220 aaKnown RBP12.18□□□□□ -0.46
CDH7-202ENST00000397968 ANKRD20A12PQ8NF67 263 aa12.18□□□□□ -0.46
CDH7-202ENST00000397968 NOM1Q5C9Z4 860 aaKnown RBP12.18□□□□□ -0.46
CDH7-202ENST00000397968 FAM184AQ8NB25 1140 aa12.18□□□□□ -0.46
CDH7-202ENST00000397968 ARGLU1Q9NWB6 273 aaPredicted RBP12.17□□□□□ -0.46
CDH7-202ENST00000397968 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
CDH7-202ENST00000397968 PLEKHG5O94827 1062 aa12.17□□□□□ -0.46
CDH7-202ENST00000397968 RNF20Q5VTR2 975 aa12.17□□□□□ -0.46
CDH7-202ENST00000397968 FAM43AQ8N2R8 423 aa12.16□□□□□ -0.46
CDH7-202ENST00000397968 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
CDH7-202ENST00000397968 DIAPH3Q9NSV4 1193 aa12.16□□□□□ -0.46
CDH7-202ENST00000397968 LETM1O95202 739 aaPredicted RBP12.16□□□□□ -0.46
CDH7-202ENST00000397968 ACBD3Q9H3P7 528 aa12.16□□□□□ -0.46
CDH7-202ENST00000397968 TPD52L1Q16890 204 aaPredicted RBP12.15□□□□□ -0.46
CDH7-202ENST00000397968 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
CDH7-202ENST00000397968 EVC2Q86UK5 1308 aa12.15□□□□□ -0.46
CDH7-202ENST00000397968 WWC1Q8IX03 1113 aa12.15□□□□□ -0.46
CDH7-202ENST00000397968 MRE11P49959 708 aa12.15□□□□□ -0.47
CDH7-202ENST00000397968 SMARCA4P51532 1647 aa12.14□□□□□ -0.47
CDH7-202ENST00000397968 CDR1P51861 262 aa12.14□□□□□ -0.47
CDH7-202ENST00000397968 NAT10Q9H0A0 1025 aaKnown RBP12.14□□□□□ -0.47
CDH7-202ENST00000397968 INTS3Q68E01 1043 aaKnown RBP12.14□□□□□ -0.47
CDH7-202ENST00000397968 GGT6Q6P531 493 aa12.14□□□□□ -0.47
CDH7-202ENST00000397968 SENP3Q9H4L4 574 aaPredicted RBP12.14□□□□□ -0.47
CDH7-202ENST00000397968 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
CDH7-202ENST00000397968 ANKRD45Q5TZF3 282 aa12.13□□□□□ -0.47
CDH7-202ENST00000397968 FOXD1Q16676 465 aa12.13□□□□□ -0.47
CDH7-202ENST00000397968 NINLQ9Y2I6 1382 aa12.13□□□□□ -0.47
CDH7-202ENST00000397968 SLC4A10Q6U841 1118 aa12.13□□□□□ -0.47
CDH7-202ENST00000397968 WASHC2AQ641Q2 1341 aa12.12□□□□□ -0.47
CDH7-202ENST00000397968 WASHC2CQ9Y4E1 1318 aa12.12□□□□□ -0.47
CDH7-202ENST00000397968 SAFB2Q14151 953 aaKnown RBP eCLIP12.12□□□□□ -0.47
CDH7-202ENST00000397968 CCDC47Q96A33 483 aaKnown RBP12.12□□□□□ -0.47
CDH7-202ENST00000397968 CNTLNQ9NXG0 1405 aa12.12□□□□□ -0.47
CDH7-202ENST00000397968 API5Q9BZZ5 524 aaKnown RBP12.12□□□□□ -0.47
CDH7-202ENST00000397968 ZNF771Q7L3S4 317 aaPredicted RBP12.12□□□□□ -0.47
CDH7-202ENST00000397968 ST20-MTHFSA0A0A6YYL1 179 aa12.12□□□□□ -0.47
CDH7-202ENST00000397968 HSP90AB4PQ58FF6 505 aa12.12□□□□□ -0.47
CDH7-202ENST00000397968 VGFO15240 615 aaPredicted RBP12.11□□□□□ -0.47
CDH7-202ENST00000397968 STK26Q9P289 416 aa12.11□□□□□ -0.47
CDH7-202ENST00000397968 SYNE3Q6ZMZ3 975 aa12.11□□□□□ -0.47
CDH7-202ENST00000397968 MCM2P49736 904 aa12.11□□□□□ -0.47
CDH7-202ENST00000397968 MYOM3Q5VTT5 1437 aa12.11□□□□□ -0.47
CDH7-202ENST00000397968 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
CDH7-202ENST00000397968 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
CDH7-202ENST00000397968 EID1Q9Y6B2 187 aa12.11□□□□□ -0.47
CDH7-202ENST00000397968 TRIM29Q14134 588 aa12.1□□□□□ -0.47
CDH7-202ENST00000397968 CHMP3Q9Y3E7 222 aa12.1□□□□□ -0.47
CDH7-202ENST00000397968 BRD4O60885 1362 aaPredicted RBP12.1□□□□□ -0.47
CDH7-202ENST00000397968 HMGN5P82970 282 aaKnown RBP12.1□□□□□ -0.47
CDH7-202ENST00000397968 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
CDH7-202ENST00000397968 CWC15Q9P013 229 aaKnown RBP12.1□□□□□ -0.47
CDH7-202ENST00000397968 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms