RNA–Protein interactions for RNA: ENST00000397222.2

PCNAP3-201, Transcript of proliferating cell nuclear antigen pseudogene 3, humanhuman

BASIC

Gene PCNAP3, Length 778 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP3-201ENST00000397222 MLH3Q9UHC1 1453 aa13.32□□□□□ -0.28
PCNAP3-201ENST00000397222 PREX2Q70Z35 1606 aa13.31□□□□□ -0.28
PCNAP3-201ENST00000397222 CLIP1P30622 1438 aa13.31□□□□□ -0.28
PCNAP3-201ENST00000397222 SOCS7O14512 581 aa13.31□□□□□ -0.28
PCNAP3-201ENST00000397222 CEBPAP49715 358 aaPredicted RBP13.31□□□□□ -0.28
PCNAP3-201ENST00000397222 ARHGAP35Q9NRY4 1499 aa13.3□□□□□ -0.28
PCNAP3-201ENST00000397222 ABCC1P33527 1531 aa13.3□□□□□ -0.28
PCNAP3-201ENST00000397222 CDK11AQ9UQ88 783 aaPredicted RBP13.3□□□□□ -0.28
PCNAP3-201ENST00000397222 LTBP4Q8N2S1 1624 aa13.3□□□□□ -0.28
PCNAP3-201ENST00000397222 LRRIQ1Q96JM4 1722 aa13.3□□□□□ -0.28
PCNAP3-201ENST00000397222 CDC42BPBQ9Y5S2 1711 aa13.3□□□□□ -0.28
PCNAP3-201ENST00000397222 ITSN2Q9NZM3 1697 aa13.29□□□□□ -0.28
PCNAP3-201ENST00000397222 ILDR2Q71H61 639 aa13.29□□□□□ -0.28
PCNAP3-201ENST00000397222 GABBR2O75899 941 aa13.28□□□□□ -0.28
PCNAP3-201ENST00000397222 MROH2AA6NES4 1674 aa13.28□□□□□ -0.28
PCNAP3-201ENST00000397222 NCOA1Q15788 1441 aa13.27□□□□□ -0.29
PCNAP3-201ENST00000397222 CNTLNQ9NXG0 1405 aa13.27□□□□□ -0.29
PCNAP3-201ENST00000397222 TRAPPC8Q9Y2L5 1435 aa13.27□□□□□ -0.29
PCNAP3-201ENST00000397222 AFAP1Q8N556 730 aa13.26□□□□□ -0.29
PCNAP3-201ENST00000397222 KIDINS220Q9ULH0 1771 aa13.26□□□□□ -0.29
PCNAP3-201ENST00000397222 NPATQ14207 1427 aa13.23□□□□□ -0.29
PCNAP3-201ENST00000397222 ZRANB1Q9UGI0 708 aa13.23□□□□□ -0.29
PCNAP3-201ENST00000397222 ATP1B4Q9UN42 357 aaPredicted RBP13.23□□□□□ -0.29
PCNAP3-201ENST00000397222 ZNF142P52746 1687 aaPredicted RBP13.23□□□□□ -0.29
PCNAP3-201ENST00000397222 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
PCNAP3-201ENST00000397222 CDC42BPAQ5VT25 1732 aa13.22□□□□□ -0.29
PCNAP3-201ENST00000397222 MYT1LQ9UL68 1186 aa13.22□□□□□ -0.29
PCNAP3-201ENST00000397222 CAMSAP1Q5T5Y3 1602 aa13.21□□□□□ -0.29
PCNAP3-201ENST00000397222 MIER1Q8N108 512 aa13.21□□□□□ -0.29
PCNAP3-201ENST00000397222 ESF1Q9H501 851 aaKnown RBP13.21□□□□□ -0.29
PCNAP3-201ENST00000397222 SAMD9LQ8IVG5 1584 aa13.2□□□□□ -0.3
PCNAP3-201ENST00000397222 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
PCNAP3-201ENST00000397222 PLA2R1Q13018 1463 aa13.18□□□□□ -0.3
PCNAP3-201ENST00000397222 ZNF579Q8NAF0 562 aaKnown RBP13.18□□□□□ -0.3
PCNAP3-201ENST00000397222 PLXNC1O60486 1568 aa13.18□□□□□ -0.3
PCNAP3-201ENST00000397222 CASKIN1Q8WXD9 1431 aa13.17□□□□□ -0.3
PCNAP3-201ENST00000397222 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
PCNAP3-201ENST00000397222 INO80Q9ULG1 1556 aaPredicted RBP13.16□□□□□ -0.3
PCNAP3-201ENST00000397222 SYCP2Q9BX26 1530 aa13.16□□□□□ -0.3
PCNAP3-201ENST00000397222 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
PCNAP3-201ENST00000397222 CEP170BQ9Y4F5 1589 aaPredicted RBP13.15□□□□□ -0.3
PCNAP3-201ENST00000397222 CLTCQ00610 1675 aaKnown RBP13.15□□□□□ -0.3
PCNAP3-201ENST00000397222 ATP7AQ04656 1500 aa13.15□□□□□ -0.3
PCNAP3-201ENST00000397222 TCOF1Q13428 1488 aaKnown RBP13.15□□□□□ -0.3
PCNAP3-201ENST00000397222 ZMYM3Q14202 1370 aa13.14□□□□□ -0.31
PCNAP3-201ENST00000397222 FYCO1Q9BQS8 1478 aa13.14□□□□□ -0.31
PCNAP3-201ENST00000397222 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
PCNAP3-201ENST00000397222 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
PCNAP3-201ENST00000397222 PLEKHH2Q8IVE3 1493 aa13.11□□□□□ -0.31
PCNAP3-201ENST00000397222 PHF12Q96QT6 1004 aa13.11□□□□□ -0.31
PCNAP3-201ENST00000397222 PTPRKQ15262 1439 aa13.11□□□□□ -0.31
PCNAP3-201ENST00000397222 A2MP01023 1474 aa13.1□□□□□ -0.31
PCNAP3-201ENST00000397222 GPATCH8Q9UKJ3 1502 aaKnown RBP13.1□□□□□ -0.31
PCNAP3-201ENST00000397222 ADGBQ8N7X0 1667 aa13.1□□□□□ -0.31
PCNAP3-201ENST00000397222 PKD2Q13563 968 aa13.1□□□□□ -0.31
PCNAP3-201ENST00000397222 KIAA1107Q9UPP5 1409 aa13.1□□□□□ -0.31
PCNAP3-201ENST00000397222 SPAG9O60271 1321 aaKnown RBP13.1□□□□□ -0.31
PCNAP3-201ENST00000397222 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
PCNAP3-201ENST00000397222 POLR1AO95602 1720 aaPredicted RBP13.08□□□□□ -0.32
PCNAP3-201ENST00000397222 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
PCNAP3-201ENST00000397222 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
PCNAP3-201ENST00000397222 NCKAP5LQ9HCH0 1330 aa13.08□□□□□ -0.32
PCNAP3-201ENST00000397222 DNMT1P26358 1616 aaKnown RBP13.06□□□□□ -0.32
PCNAP3-201ENST00000397222 A2ML1A8K2U0 1454 aa13.06□□□□□ -0.32
PCNAP3-201ENST00000397222 POTEIP0CG38 1075 aa13.06□□□□□ -0.32
PCNAP3-201ENST00000397222 TSPYL2Q9H2G4 693 aaPredicted RBP13.06□□□□□ -0.32
PCNAP3-201ENST00000397222 MED1Q15648 1581 aaPredicted RBP13.06□□□□□ -0.32
PCNAP3-201ENST00000397222 CPS1P31327 1500 aa13.05□□□□□ -0.32
PCNAP3-201ENST00000397222 FAM135AQ9P2D6 1515 aa13.05□□□□□ -0.32
PCNAP3-201ENST00000397222 GALR2O43603 387 aaPredicted RBP13.05□□□□□ -0.32
PCNAP3-201ENST00000397222 RASEFQ8IZ41 740 aa13.05□□□□□ -0.32
PCNAP3-201ENST00000397222 FBXO3Q9UK99 471 aa13.05□□□□□ -0.32
PCNAP3-201ENST00000397222 ZNF777Q9ULD5 760 aaPredicted RBP13.05□□□□□ -0.32
PCNAP3-201ENST00000397222 NEURL4Q96JN8 1562 aa13.05□□□□□ -0.32
PCNAP3-201ENST00000397222 CLCN6P51797 869 aa13.03□□□□□ -0.32
PCNAP3-201ENST00000397222 HNRNPMP52272 730 aaKnown RBP eCLIP13.03□□□□□ -0.32
PCNAP3-201ENST00000397222 TIAM1Q13009 1591 aa13.02□□□□□ -0.33
PCNAP3-201ENST00000397222 CCDC61Q9Y6R9 512 aa13.01□□□□□ -0.33
PCNAP3-201ENST00000397222 CCNB3Q8WWL7 1395 aa13.01□□□□□ -0.33
PCNAP3-201ENST00000397222 KDM5DQ9BY66 1539 aa13□□□□□ -0.33
PCNAP3-201ENST00000397222 RTEL1-TNFRSF6BF6WH68 1400 aa13□□□□□ -0.33
PCNAP3-201ENST00000397222 GGT6Q6P531 493 aa13□□□□□ -0.33
PCNAP3-201ENST00000397222 CFDP1Q9UEE9 299 aaPredicted RBP13□□□□□ -0.33
PCNAP3-201ENST00000397222 EHBP1L1Q8N3D4 1523 aa12.99□□□□□ -0.33
PCNAP3-201ENST00000397222 PZPP20742 1482 aa12.99□□□□□ -0.33
PCNAP3-201ENST00000397222 SHANK2Q9UPX8 1470 aa12.99□□□□□ -0.33
PCNAP3-201ENST00000397222 NUBP1P53384 320 aa12.99□□□□□ -0.33
PCNAP3-201ENST00000397222 MBD5Q9P267 1494 aa12.98□□□□□ -0.33
PCNAP3-201ENST00000397222 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
PCNAP3-201ENST00000397222 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
PCNAP3-201ENST00000397222 TNRQ92752 1358 aa12.97□□□□□ -0.33
PCNAP3-201ENST00000397222 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
PCNAP3-201ENST00000397222 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
PCNAP3-201ENST00000397222 HSPA1LP34931 641 aa12.96□□□□□ -0.33
PCNAP3-201ENST00000397222 DHX29Q7Z478 1369 aaKnown RBP12.95□□□□□ -0.34
PCNAP3-201ENST00000397222 ALKQ9UM73 1620 aa12.95□□□□□ -0.34
PCNAP3-201ENST00000397222 TOM1O60784 492 aa12.95□□□□□ -0.34
PCNAP3-201ENST00000397222 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
PCNAP3-201ENST00000397222 MED14O60244 1454 aa12.95□□□□□ -0.34
PCNAP3-201ENST00000397222 NLRP1Q9C000 1473 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms