RNA–Protein interactions for RNA: ENST00000397171.6

SCMH1-208, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 5 BASIC

Gene SCMH1, Length 3,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-208ENST00000397171 RCAN3Q9UKA8 241 aa12.98□□□□□ -0.33
SCMH1-208ENST00000397171 ERCC6L2Q5T890 1561 aa12.98□□□□□ -0.33
SCMH1-208ENST00000397171 RPRD2Q5VT52 1461 aaKnown RBP12.98□□□□□ -0.33
SCMH1-208ENST00000397171 SKAP1Q86WV1 359 aa12.98□□□□□ -0.33
SCMH1-208ENST00000397171 CARMIL2Q6F5E8 1435 aa12.98□□□□□ -0.33
SCMH1-208ENST00000397171 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
SCMH1-208ENST00000397171 LRPPRCP42704 1394 aaKnown RBP12.97□□□□□ -0.33
SCMH1-208ENST00000397171 KIF14Q15058 1648 aa12.97□□□□□ -0.33
SCMH1-208ENST00000397171 TMC1Q8TDI8 760 aa12.96□□□□□ -0.33
SCMH1-208ENST00000397171 RIMBP3CA6NJZ7 1639 aa12.96□□□□□ -0.33
SCMH1-208ENST00000397171 RIMBP3BA6NNM3 1639 aa12.96□□□□□ -0.33
SCMH1-208ENST00000397171 RIMBP3Q9UFD9 1639 aa12.96□□□□□ -0.33
SCMH1-208ENST00000397171 HNRNPMP52272 730 aaKnown RBP eCLIP12.95□□□□□ -0.342e-6■■□□□ 13.9
SCMH1-208ENST00000397171 ANKRD30BQ9BXX2 1392 aa12.95□□□□□ -0.34
SCMH1-208ENST00000397171 GPATCH8Q9UKJ3 1502 aaKnown RBP12.95□□□□□ -0.34
SCMH1-208ENST00000397171 CAMSAP2Q08AD1 1489 aa12.95□□□□□ -0.34
SCMH1-208ENST00000397171 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
SCMH1-208ENST00000397171 PKD2Q13563 968 aa12.95□□□□□ -0.34
SCMH1-208ENST00000397171 DAXXQ9UER7 740 aaPredicted RBP12.93□□□□□ -0.34
SCMH1-208ENST00000397171 ROCK1Q13464 1354 aa12.93□□□□□ -0.34
SCMH1-208ENST00000397171 DNMT1P26358 1616 aaKnown RBP12.93□□□□□ -0.34
SCMH1-208ENST00000397171 ATP10BO94823 1461 aa12.91□□□□□ -0.34
SCMH1-208ENST00000397171 RRAGDQ9NQL2 400 aaPredicted RBP12.9□□□□□ -0.34
SCMH1-208ENST00000397171 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
SCMH1-208ENST00000397171 TSPY4P0CV99 314 aa12.89□□□□□ -0.35
SCMH1-208ENST00000397171 TSPY10P0CW01 314 aa12.89□□□□□ -0.35
SCMH1-208ENST00000397171 BRD4O60885 1362 aaPredicted RBP12.89□□□□□ -0.35
SCMH1-208ENST00000397171 USP47Q96K76 1375 aa12.89□□□□□ -0.35
SCMH1-208ENST00000397171 PTPRGP23470 1445 aa12.89□□□□□ -0.35
SCMH1-208ENST00000397171 PLIN1O60240 522 aa12.89□□□□□ -0.35
SCMH1-208ENST00000397171 GLIPR1L2Q4G1C9 344 aa12.89□□□□□ -0.35
SCMH1-208ENST00000397171 CRBNQ96SW2 442 aa12.89□□□□□ -0.35
SCMH1-208ENST00000397171 KDM5CP41229 1560 aa12.89□□□□□ -0.35
SCMH1-208ENST00000397171 NUP155O75694 1391 aa12.88□□□□□ -0.35
SCMH1-208ENST00000397171 ANKRD30AQ9BXX3 1397 aa12.88□□□□□ -0.35
SCMH1-208ENST00000397171 PZPP20742 1482 aa12.87□□□□□ -0.35
SCMH1-208ENST00000397171 ARID4BQ4LE39 1312 aaPredicted RBP12.87□□□□□ -0.35
SCMH1-208ENST00000397171 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
SCMH1-208ENST00000397171 KIF15Q9NS87 1388 aa12.87□□□□□ -0.35
SCMH1-208ENST00000397171 ANKRD50Q9ULJ7 1429 aa12.87□□□□□ -0.35
SCMH1-208ENST00000397171 MBD5Q9P267 1494 aa12.86□□□□□ -0.35
SCMH1-208ENST00000397171 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
SCMH1-208ENST00000397171 C8orf34Q49A92 452 aa12.85□□□□□ -0.35
SCMH1-208ENST00000397171 CDCA7LQ96GN5 454 aa12.85□□□□□ -0.35
SCMH1-208ENST00000397171 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.85□□□□□ -0.353e-7■□□□□ 11
SCMH1-208ENST00000397171 KDM2BQ8NHM5 1336 aa12.85□□□□□ -0.35
SCMH1-208ENST00000397171 ROCK2O75116 1388 aaKnown RBP12.85□□□□□ -0.35
SCMH1-208ENST00000397171 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
SCMH1-208ENST00000397171 ZMYND15Q9H091 742 aa12.85□□□□□ -0.35
SCMH1-208ENST00000397171 SHROOM2Q13796 1616 aa12.84□□□□□ -0.35
SCMH1-208ENST00000397171 VSIG10Q8N0Z9 540 aa12.84□□□□□ -0.35
SCMH1-208ENST00000397171 KTN1Q86UP2 1357 aaKnown RBP12.84□□□□□ -0.35
SCMH1-208ENST00000397171 POGKQ9P215 609 aa12.83□□□□□ -0.35
SCMH1-208ENST00000397171 E9PCH4 1651 aa12.83□□□□□ -0.36
SCMH1-208ENST00000397171 C9orf84Q5VXU9 1444 aa12.83□□□□□ -0.36
SCMH1-208ENST00000397171 TRHP20396 242 aaPredicted RBP12.82□□□□□ -0.36
SCMH1-208ENST00000397171 RALBP1Q15311 655 aa12.82□□□□□ -0.36
SCMH1-208ENST00000397171 ABCA8O94911 1581 aa12.82□□□□□ -0.36
SCMH1-208ENST00000397171 KIAA1107Q9UPP5 1409 aa12.82□□□□□ -0.36
SCMH1-208ENST00000397171 RGL3Q3MIN7 710 aa12.81□□□□□ -0.36
SCMH1-208ENST00000397171 ITSN2Q9NZM3 1697 aa12.81□□□□□ -0.36
SCMH1-208ENST00000397171 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
SCMH1-208ENST00000397171 ABCC10Q5T3U5 1492 aa12.81□□□□□ -0.36
SCMH1-208ENST00000397171 SLC24A1O60721 1099 aa12.8□□□□□ -0.36
SCMH1-208ENST00000397171 C20orf194Q5TEA3 1177 aa12.8□□□□□ -0.36
SCMH1-208ENST00000397171 CDC42BPAQ5VT25 1732 aa12.8□□□□□ -0.36
SCMH1-208ENST00000397171 CENPQQ7L2Z9 268 aaPredicted RBP12.8□□□□□ -0.36
SCMH1-208ENST00000397171 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCMH1-208ENST00000397171 L1TD1Q5T7N2 865 aaKnown RBP12.78□□□□□ -0.36
SCMH1-208ENST00000397171 CARD11Q9BXL7 1154 aa12.78□□□□□ -0.36
SCMH1-208ENST00000397171 NAP1L5Q96NT1 182 aaPredicted RBP12.77□□□□□ -0.36
SCMH1-208ENST00000397171 ADGRL2O95490 1459 aa12.77□□□□□ -0.37
SCMH1-208ENST00000397171 ADCY10Q96PN6 1610 aa12.77□□□□□ -0.37
SCMH1-208ENST00000397171 HSP90AA2PQ14568 343 aaPredicted RBP12.77□□□□□ -0.37
SCMH1-208ENST00000397171 NLRP13Q86W25 1043 aa12.76□□□□□ -0.37
SCMH1-208ENST00000397171 RRP9O43818 475 aaKnown RBP12.75□□□□□ -0.37
SCMH1-208ENST00000397171 RALGAPBQ86X10 1494 aa12.75□□□□□ -0.37
SCMH1-208ENST00000397171 ADGBQ8N7X0 1667 aa12.75□□□□□ -0.37
SCMH1-208ENST00000397171 PARD3Q8TEW0 1356 aa12.75□□□□□ -0.37
SCMH1-208ENST00000397171 PNNQ9H307 717 aaKnown RBP12.75□□□□□ -0.37
SCMH1-208ENST00000397171 BLMP54132 1417 aaPredicted RBP12.74□□□□□ -0.37
SCMH1-208ENST00000397171 ST20-MTHFSA0A0A6YYL1 179 aa12.74□□□□□ -0.37
SCMH1-208ENST00000397171 HSP90AA1P07900 732 aaKnown RBP12.74□□□□□ -0.37
SCMH1-208ENST00000397171 RGS3P49796 1198 aa12.73□□□□□ -0.37
SCMH1-208ENST00000397171 CROCC2H7BZ55 1655 aa12.73□□□□□ -0.37
SCMH1-208ENST00000397171 CLCN1P35523 988 aa12.73□□□□□ -0.37
SCMH1-208ENST00000397171 USP19O94966 1318 aa12.73□□□□□ -0.37
SCMH1-208ENST00000397171 ZMYM4Q5VZL5 1548 aa12.73□□□□□ -0.37
SCMH1-208ENST00000397171 UHRF1BP1Q6BDS2 1440 aa12.72□□□□□ -0.37
SCMH1-208ENST00000397171 PLEKHH2Q8IVE3 1493 aa12.71□□□□□ -0.37
SCMH1-208ENST00000397171 ARHGAP5Q13017 1502 aa12.71□□□□□ -0.37
SCMH1-208ENST00000397171 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
SCMH1-208ENST00000397171 INSRP06213 1382 aa12.71□□□□□ -0.38
SCMH1-208ENST00000397171 SYCP2Q9BX26 1530 aa12.7□□□□□ -0.38
SCMH1-208ENST00000397171 SAMD9LQ8IVG5 1584 aa12.7□□□□□ -0.38
SCMH1-208ENST00000397171 NBPF1Q3BBV0 1214 aa12.7□□□□□ -0.38
SCMH1-208ENST00000397171 CCDC141Q6ZP82 1450 aa12.7□□□□□ -0.38
SCMH1-208ENST00000397171 SLKQ9H2G2 1235 aaPredicted RBP12.69□□□□□ -0.38
SCMH1-208ENST00000397171 ARXQ96QS3 562 aa12.69□□□□□ -0.38
SCMH1-208ENST00000397171 CDC42BPBQ9Y5S2 1711 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms