RNA–Protein interactions for RNA: ENST00000397011.2

EIF3B-202, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3B, Length 2,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-202ENST00000397011 PLIN1O60240 522 aa25.62■■□□□ 1.69
EIF3B-202ENST00000397011 PAK3O75914 559 aaPredicted RBP25.62■■□□□ 1.69
EIF3B-202ENST00000397011 EXOC6Q8TAG9 804 aa25.62■■□□□ 1.69
EIF3B-202ENST00000397011 NPM2Q86SE8 214 aaKnown RBP25.61■■□□□ 1.69
EIF3B-202ENST00000397011 SKAP1Q86WV1 359 aa25.59■■□□□ 1.69
EIF3B-202ENST00000397011 ABCA8O94911 1581 aa25.58■■□□□ 1.69
EIF3B-202ENST00000397011 POLR1AO95602 1720 aaPredicted RBP25.58■■□□□ 1.69
EIF3B-202ENST00000397011 PANK3Q9H999 370 aa25.57■■□□□ 1.68
EIF3B-202ENST00000397011 UHRF1BP1Q6BDS2 1440 aa25.57■■□□□ 1.68
EIF3B-202ENST00000397011 ADCY10Q96PN6 1610 aa25.57■■□□□ 1.68
EIF3B-202ENST00000397011 BCL11AQ9H165 835 aa25.56■■□□□ 1.68
EIF3B-202ENST00000397011 FAM135AQ9P2D6 1515 aa25.54■■□□□ 1.68
EIF3B-202ENST00000397011 ARID4BQ4LE39 1312 aaPredicted RBP25.54■■□□□ 1.68
EIF3B-202ENST00000397011 DISP3Q9P2K9 1392 aa25.54■■□□□ 1.68
EIF3B-202ENST00000397011 RALBP1Q15311 655 aa25.54■■□□□ 1.68
EIF3B-202ENST00000397011 MYT1LQ9UL68 1186 aa25.53■■□□□ 1.68
EIF3B-202ENST00000397011 SYCP2Q9BX26 1530 aa25.53■■□□□ 1.68
EIF3B-202ENST00000397011 KTN1Q86UP2 1357 aaKnown RBP25.53■■□□□ 1.68
EIF3B-202ENST00000397011 RCAN3Q9UKA8 241 aa25.53■■□□□ 1.68
EIF3B-202ENST00000397011 CCDC141Q6ZP82 1450 aa25.52■■□□□ 1.68
EIF3B-202ENST00000397011 NLRP13Q86W25 1043 aa25.52■■□□□ 1.68
EIF3B-202ENST00000397011 ARHGAP5Q13017 1502 aa25.52■■□□□ 1.68
EIF3B-202ENST00000397011 PLEKHH2Q8IVE3 1493 aa25.51■■□□□ 1.67
EIF3B-202ENST00000397011 RRP1P56182 461 aaKnown RBP25.5■■□□□ 1.67
EIF3B-202ENST00000397011 SAMD9LQ8IVG5 1584 aa25.5■■□□□ 1.67
EIF3B-202ENST00000397011 SHANK2Q9UPX8 1470 aa25.49■■□□□ 1.67
EIF3B-202ENST00000397011 BRD4O60885 1362 aaPredicted RBP25.49■■□□□ 1.67
EIF3B-202ENST00000397011 PRAG1Q86YV5 1406 aa25.48■■□□□ 1.67
EIF3B-202ENST00000397011 NOP58Q9Y2X3 529 aaKnown RBP25.47■■□□□ 1.67
EIF3B-202ENST00000397011 PER1O15534 1290 aaPredicted RBP25.47■■□□□ 1.67
EIF3B-202ENST00000397011 PLA2R1Q13018 1463 aa25.46■■□□□ 1.67
EIF3B-202ENST00000397011 RNF123Q5XPI4 1314 aa25.46■■□□□ 1.67
EIF3B-202ENST00000397011 TESK2Q96S53 571 aa25.46■■□□□ 1.67
EIF3B-202ENST00000397011 LRPPRCP42704 1394 aaKnown RBP25.45■■□□□ 1.66
EIF3B-202ENST00000397011 ARHGEF12Q9NZN5 1544 aa25.45■■□□□ 1.66
EIF3B-202ENST00000397011 AFAP1Q8N556 730 aa25.44■■□□□ 1.66
EIF3B-202ENST00000397011 A2MP01023 1474 aa25.43■■□□□ 1.66
EIF3B-202ENST00000397011 ANP32AP39687 249 aaKnown RBP25.42■■□□□ 1.66
EIF3B-202ENST00000397011 KDM5DQ9BY66 1539 aa25.42■■□□□ 1.66
EIF3B-202ENST00000397011 CDC42BPBQ9Y5S2 1711 aa25.41■■□□□ 1.66
EIF3B-202ENST00000397011 ERCC6L2Q5T890 1561 aa25.4■■□□□ 1.66
EIF3B-202ENST00000397011 TTC37Q6PGP7 1564 aa25.4■■□□□ 1.66
EIF3B-202ENST00000397011 TMF1P82094 1093 aa25.39■■□□□ 1.66
EIF3B-202ENST00000397011 ADAMTS8Q9UP79 889 aa25.38■■□□□ 1.65
EIF3B-202ENST00000397011 PARD3Q8TEW0 1356 aa25.37■■□□□ 1.65
EIF3B-202ENST00000397011 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
EIF3B-202ENST00000397011 RSPH4AQ5TD94 716 aa25.36■■□□□ 1.65
EIF3B-202ENST00000397011 C20orf194Q5TEA3 1177 aa25.35■■□□□ 1.65
EIF3B-202ENST00000397011 ERBINQ96RT1 1412 aa25.33■■□□□ 1.65
EIF3B-202ENST00000397011 CCDC146Q8IYE0 955 aa25.33■■□□□ 1.65
EIF3B-202ENST00000397011 CRBNQ96SW2 442 aa25.32■■□□□ 1.64
EIF3B-202ENST00000397011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.32■■□□□ 1.642e-6■■□□□ 13
EIF3B-202ENST00000397011 ARHGEF5Q12774 1597 aa25.32■■□□□ 1.64
EIF3B-202ENST00000397011 KNSTRNQ9Y448 316 aa25.32■■□□□ 1.64
EIF3B-202ENST00000397011 ZBTB47Q9UFB7 747 aaPredicted RBP25.31■■□□□ 1.64
EIF3B-202ENST00000397011 DEKP35659 375 aaKnown RBP25.3■■□□□ 1.64
EIF3B-202ENST00000397011 PREX2Q70Z35 1606 aa25.29■■□□□ 1.64
EIF3B-202ENST00000397011 IPO9Q96P70 1041 aaKnown RBP25.29■■□□□ 1.64
EIF3B-202ENST00000397011 TRPM1Q7Z4N2 1603 aa25.28■■□□□ 1.64
EIF3B-202ENST00000397011 EFCAB2Q5VUJ9 269 aa25.28■■□□□ 1.64
EIF3B-202ENST00000397011 LAS1LQ9Y4W2 734 aaKnown RBP25.27■■□□□ 1.64
EIF3B-202ENST00000397011 TRAPPC8Q9Y2L5 1435 aa25.27■■□□□ 1.64
EIF3B-202ENST00000397011 WDR43Q15061 677 aaKnown RBP eCLIP25.26■■□□□ 1.631e-5■■■■□ 24.6
EIF3B-202ENST00000397011 COL17A1Q9UMD9 1497 aaPredicted RBP25.26■■□□□ 1.63
EIF3B-202ENST00000397011 SPAG9O60271 1321 aaKnown RBP25.25■■□□□ 1.63
EIF3B-202ENST00000397011 PDE4AP27815 886 aa25.23■■□□□ 1.63
EIF3B-202ENST00000397011 CHGAP10645 457 aaKnown RBP25.23■■□□□ 1.63
EIF3B-202ENST00000397011 KIF3BO15066 747 aa25.22■■□□□ 1.63
EIF3B-202ENST00000397011 PPP2R1AP30153 589 aa25.22■■□□□ 1.63
EIF3B-202ENST00000397011 TNNT2P45379 298 aaPredicted RBP25.21■■□□□ 1.63
EIF3B-202ENST00000397011 GPRASP1Q5JY77 1395 aa25.2■■□□□ 1.63
EIF3B-202ENST00000397011 CHD1O14646 1710 aa25.2■■□□□ 1.63
EIF3B-202ENST00000397011 E9PCH4 1651 aa25.2■■□□□ 1.62
EIF3B-202ENST00000397011 PDE3BQ13370 1112 aa25.19■■□□□ 1.62
EIF3B-202ENST00000397011 CFAP70Q5T0N1 1121 aa25.18■■□□□ 1.62
EIF3B-202ENST00000397011 MAGI2Q86UL8 1455 aa25.17■■□□□ 1.62
EIF3B-202ENST00000397011 PLEKHH1Q9ULM0 1364 aa25.16■■□□□ 1.62
EIF3B-202ENST00000397011 PRDM15P57071 1507 aaPredicted RBP25.14■■□□□ 1.61
EIF3B-202ENST00000397011 SLC4A3P48751 1232 aa25.13■■□□□ 1.61
EIF3B-202ENST00000397011 AMER1Q5JTC6 1135 aaPredicted RBP25.13■■□□□ 1.61
EIF3B-202ENST00000397011 NEUROD2Q15784 382 aa25.13■■□□□ 1.61
EIF3B-202ENST00000397011 RTL5Q5HYW3 569 aaPredicted RBP25.12■■□□□ 1.61
EIF3B-202ENST00000397011 MYO5CQ9NQX4 1742 aa25.12■■□□□ 1.61
EIF3B-202ENST00000397011 APAF1O14727 1248 aa25.11■■□□□ 1.61
EIF3B-202ENST00000397011 TCERG1O14776 1098 aaKnown RBP25.11■■□□□ 1.61
EIF3B-202ENST00000397011 SPINK5Q9NQ38 1064 aaPredicted RBP25.11■■□□□ 1.61
EIF3B-202ENST00000397011 NUTM2DQ5VT03 806 aaPredicted RBP25.11■■□□□ 1.61
EIF3B-202ENST00000397011 UNC13BO14795 1591 aa25.1■■□□□ 1.61
EIF3B-202ENST00000397011 PLCH2O75038 1416 aa25.1■■□□□ 1.61
EIF3B-202ENST00000397011 DUOX2Q9NRD8 1548 aa25.1■■□□□ 1.61
EIF3B-202ENST00000397011 RGS3P49796 1198 aa25.1■■□□□ 1.61
EIF3B-202ENST00000397011 ABCC2Q92887 1545 aa25.1■■□□□ 1.61
EIF3B-202ENST00000397011 BACH2Q9BYV9 841 aa25.09■■□□□ 1.61
EIF3B-202ENST00000397011 DUSP27Q5VZP5 1158 aa25.07■■□□□ 1.6
EIF3B-202ENST00000397011 ADGRF5Q8IZF2 1346 aa25.07■■□□□ 1.6
EIF3B-202ENST00000397011 WDR7Q9Y4E6 1490 aa25.07■■□□□ 1.6
EIF3B-202ENST00000397011 WASHC2CQ9Y4E1 1318 aa25.07■■□□□ 1.6
EIF3B-202ENST00000397011 IQGAP3Q86VI3 1631 aa25.06■■□□□ 1.6
EIF3B-202ENST00000397011 GOLGA2Q08379 1002 aa25.06■■□□□ 1.6
EIF3B-202ENST00000397011 BLMP54132 1417 aaPredicted RBP25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms