RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 PZPP20742 1482 aa18.17■□□□□ 0.5
TRIM40-207ENST00000396581 RNF123Q5XPI4 1314 aa18.16■□□□□ 0.5
TRIM40-207ENST00000396581 KIF15Q9NS87 1388 aa18.16■□□□□ 0.5
TRIM40-207ENST00000396581 MAST1Q9Y2H9 1570 aa18.15■□□□□ 0.5
TRIM40-207ENST00000396581 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.5
TRIM40-207ENST00000396581 ABCC1P33527 1531 aa18.14■□□□□ 0.49
TRIM40-207ENST00000396581 ARID4BQ4LE39 1312 aaPredicted RBP18.13■□□□□ 0.49
TRIM40-207ENST00000396581 B4GALNT3Q6L9W6 998 aa18.13■□□□□ 0.49
TRIM40-207ENST00000396581 CYB5RLQ6IPT4 315 aa18.12■□□□□ 0.49
TRIM40-207ENST00000396581 SLC4A1APQ9BWU0 796 aaKnown RBP18.12■□□□□ 0.49
TRIM40-207ENST00000396581 FANCAO15360 1455 aa18.12■□□□□ 0.49
TRIM40-207ENST00000396581 ERICH6Q7L0X2 663 aa18.11■□□□□ 0.49
TRIM40-207ENST00000396581 BCORL1Q5H9F3 1711 aa18.1■□□□□ 0.49
TRIM40-207ENST00000396581 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
TRIM40-207ENST00000396581 RIMBP3CA6NJZ7 1639 aa18.1■□□□□ 0.49
TRIM40-207ENST00000396581 RIMBP3BA6NNM3 1639 aa18.1■□□□□ 0.49
TRIM40-207ENST00000396581 RIMBP3Q9UFD9 1639 aa18.1■□□□□ 0.49
TRIM40-207ENST00000396581 KDM5CP41229 1560 aa18.09■□□□□ 0.49
TRIM40-207ENST00000396581 NUDCQ9Y266 331 aa18.08■□□□□ 0.48
TRIM40-207ENST00000396581 PLXNC1O60486 1568 aa18.08■□□□□ 0.48
TRIM40-207ENST00000396581 UHRF1BP1Q6BDS2 1440 aa18.07■□□□□ 0.48
TRIM40-207ENST00000396581 USP47Q96K76 1375 aa18.06■□□□□ 0.48
TRIM40-207ENST00000396581 RTEL1-TNFRSF6BF6WH68 1400 aa18.05■□□□□ 0.48
TRIM40-207ENST00000396581 AFAP1Q8N556 730 aa18.05■□□□□ 0.48
TRIM40-207ENST00000396581 NUP155O75694 1391 aa18.05■□□□□ 0.48
TRIM40-207ENST00000396581 CD109Q6YHK3 1445 aa18.05■□□□□ 0.48
TRIM40-207ENST00000396581 KDM5DQ9BY66 1539 aa18.04■□□□□ 0.48
TRIM40-207ENST00000396581 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
TRIM40-207ENST00000396581 ADGRL1O94910 1474 aa18.03■□□□□ 0.48
TRIM40-207ENST00000396581 SPAG9O60271 1321 aaKnown RBP18.03■□□□□ 0.48
TRIM40-207ENST00000396581 SCAPERQ9BY12 1400 aa18.02■□□□□ 0.48
TRIM40-207ENST00000396581 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
TRIM40-207ENST00000396581 DUOX2Q9NRD8 1548 aa18.02■□□□□ 0.48
TRIM40-207ENST00000396581 PKD2Q13563 968 aa18■□□□□ 0.47
TRIM40-207ENST00000396581 ERBINQ96RT1 1412 aa18■□□□□ 0.47
TRIM40-207ENST00000396581 PNISRQ8TF01 805 aaKnown RBP18■□□□□ 0.47
TRIM40-207ENST00000396581 LRPPRCP42704 1394 aaKnown RBP17.99■□□□□ 0.47
TRIM40-207ENST00000396581 ZFYVE16Q7Z3T8 1539 aa17.99■□□□□ 0.47
TRIM40-207ENST00000396581 NOP58Q9Y2X3 529 aaKnown RBP17.98■□□□□ 0.47
TRIM40-207ENST00000396581 KTN1Q86UP2 1357 aaKnown RBP17.98■□□□□ 0.47
TRIM40-207ENST00000396581 UNC13BO14795 1591 aa17.95■□□□□ 0.46
TRIM40-207ENST00000396581 CFAP74Q9C0B2 1584 aa17.95■□□□□ 0.46
TRIM40-207ENST00000396581 FAM135AQ9P2D6 1515 aa17.94■□□□□ 0.46
TRIM40-207ENST00000396581 ZNF518AQ6AHZ1 1483 aa17.94■□□□□ 0.46
TRIM40-207ENST00000396581 INO80Q9ULG1 1556 aaPredicted RBP17.94■□□□□ 0.46
TRIM40-207ENST00000396581 ATP7AQ04656 1500 aa17.94■□□□□ 0.46
TRIM40-207ENST00000396581 E9PCH4 1651 aa17.94■□□□□ 0.46
TRIM40-207ENST00000396581 NEO1Q92859 1461 aa17.94■□□□□ 0.46
TRIM40-207ENST00000396581 GLI2P10070 1586 aa17.93■□□□□ 0.46
TRIM40-207ENST00000396581 MAGI2Q86UL8 1455 aa17.93■□□□□ 0.46
TRIM40-207ENST00000396581 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
TRIM40-207ENST00000396581 CCDC136Q96JN2 1154 aa17.92■□□□□ 0.46
TRIM40-207ENST00000396581 POGZQ7Z3K3 1410 aa17.91■□□□□ 0.46
TRIM40-207ENST00000396581 MAP3K4Q9Y6R4 1608 aa17.9■□□□□ 0.46
TRIM40-207ENST00000396581 PAK3O75914 559 aaPredicted RBP17.89■□□□□ 0.45
TRIM40-207ENST00000396581 IPO9Q96P70 1041 aaKnown RBP17.89■□□□□ 0.45
TRIM40-207ENST00000396581 IQGAP3Q86VI3 1631 aa17.88■□□□□ 0.45
TRIM40-207ENST00000396581 DEKP35659 375 aaKnown RBP17.88■□□□□ 0.45
TRIM40-207ENST00000396581 RALBP1Q15311 655 aa17.88■□□□□ 0.45
TRIM40-207ENST00000396581 TMC1Q8TDI8 760 aa17.88■□□□□ 0.45
TRIM40-207ENST00000396581 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.88■□□□□ 0.45
TRIM40-207ENST00000396581 MYBBP1AQ9BQG0 1328 aaKnown RBP17.87■□□□□ 0.45
TRIM40-207ENST00000396581 MLH3Q9UHC1 1453 aa17.87■□□□□ 0.45
TRIM40-207ENST00000396581 KIDINS220Q9ULH0 1771 aa17.86■□□□□ 0.45
TRIM40-207ENST00000396581 FAM69CQ0P6D2 419 aa17.86■□□□□ 0.45
TRIM40-207ENST00000396581 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
TRIM40-207ENST00000396581 ANP32AP39687 249 aaKnown RBP17.84■□□□□ 0.45
TRIM40-207ENST00000396581 DIP2BQ9P265 1576 aa17.84■□□□□ 0.45
TRIM40-207ENST00000396581 ZNF326Q5BKZ1 582 aaKnown RBP17.84■□□□□ 0.45
TRIM40-207ENST00000396581 INSRP06213 1382 aa17.82■□□□□ 0.44
TRIM40-207ENST00000396581 DEPDC5O75140 1603 aa17.82■□□□□ 0.44
TRIM40-207ENST00000396581 ATP10AO60312 1499 aa17.81■□□□□ 0.44
TRIM40-207ENST00000396581 RRP1P56182 461 aaKnown RBP17.81■□□□□ 0.44
TRIM40-207ENST00000396581 POLR3GLQ9BT43 218 aa17.81■□□□□ 0.44
TRIM40-207ENST00000396581 PARD3Q8TEW0 1356 aa17.81■□□□□ 0.44
TRIM40-207ENST00000396581 ZMYM4Q5VZL5 1548 aa17.81■□□□□ 0.44
TRIM40-207ENST00000396581 EIF2AK4Q9P2K8 1649 aaKnown RBP17.81■□□□□ 0.44
TRIM40-207ENST00000396581 PLA2R1Q13018 1463 aa17.81■□□□□ 0.44
TRIM40-207ENST00000396581 ST20-MTHFSA0A0A6YYL1 179 aa17.81■□□□□ 0.44
TRIM40-207ENST00000396581 KIF3BO15066 747 aa17.81■□□□□ 0.44
TRIM40-207ENST00000396581 RAPGEF3O95398 923 aa17.81■□□□□ 0.44
TRIM40-207ENST00000396581 PDE3BQ13370 1112 aa17.8■□□□□ 0.44
TRIM40-207ENST00000396581 HECW2Q9P2P5 1572 aa17.79■□□□□ 0.44
TRIM40-207ENST00000396581 A2MP01023 1474 aa17.79■□□□□ 0.44
TRIM40-207ENST00000396581 VWDEQ8N2E2 1590 aa17.78■□□□□ 0.44
TRIM40-207ENST00000396581 TRPM1Q7Z4N2 1603 aa17.78■□□□□ 0.44
TRIM40-207ENST00000396581 CCDC144AA2RUR9 1427 aa17.77■□□□□ 0.44
TRIM40-207ENST00000396581 TCERG1O14776 1098 aaKnown RBP17.77■□□□□ 0.44
TRIM40-207ENST00000396581 KANK1Q14678 1352 aa17.77■□□□□ 0.43
TRIM40-207ENST00000396581 NLRP13Q86W25 1043 aa17.76■□□□□ 0.43
TRIM40-207ENST00000396581 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
TRIM40-207ENST00000396581 LAMC1P11047 1609 aa17.76■□□□□ 0.43
TRIM40-207ENST00000396581 PRDM15P57071 1507 aaPredicted RBP17.76■□□□□ 0.43
TRIM40-207ENST00000396581 GPRASP1Q5JY77 1395 aa17.75■□□□□ 0.43
TRIM40-207ENST00000396581 PRAG1Q86YV5 1406 aa17.75■□□□□ 0.43
TRIM40-207ENST00000396581 CNGB1Q14028 1251 aaPredicted RBP17.75■□□□□ 0.43
TRIM40-207ENST00000396581 RCAN3Q9UKA8 241 aa17.75■□□□□ 0.43
TRIM40-207ENST00000396581 RICTORQ6R327 1708 aa17.74■□□□□ 0.43
TRIM40-207ENST00000396581 MROH1Q8NDA8 1641 aa17.74■□□□□ 0.43
TRIM40-207ENST00000396581 WASHC2CQ9Y4E1 1318 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms