RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 TMC1Q8TDI8 760 aa21.57■■□□□ 1.04
PDE1C-202ENST00000396182 CDC42BPAQ5VT25 1732 aa21.56■■□□□ 1.04
PDE1C-202ENST00000396182 TSPY4P0CV99 314 aa21.56■■□□□ 1.04
PDE1C-202ENST00000396182 TSPY10P0CW01 314 aa21.56■■□□□ 1.04
PDE1C-202ENST00000396182 ATP10BO94823 1461 aa21.56■■□□□ 1.04
PDE1C-202ENST00000396182 ERCC6Q03468 1493 aa21.56■■□□□ 1.04
PDE1C-202ENST00000396182 ROCK2O75116 1388 aaKnown RBP21.55■■□□□ 1.04
PDE1C-202ENST00000396182 HNRNPMP52272 730 aaKnown RBP eCLIP21.55■■□□□ 1.04
PDE1C-202ENST00000396182 DCAF11Q8TEB1 546 aa21.55■■□□□ 1.04
PDE1C-202ENST00000396182 NUP160Q12769 1436 aa21.55■■□□□ 1.04
PDE1C-202ENST00000396182 SHANK2Q9UPX8 1470 aa21.53■■□□□ 1.04
PDE1C-202ENST00000396182 ARHGEF12Q9NZN5 1544 aa21.51■■□□□ 1.03
PDE1C-202ENST00000396182 ABCA8O94911 1581 aa21.51■■□□□ 1.03
PDE1C-202ENST00000396182 KIF15Q9NS87 1388 aa21.51■■□□□ 1.03
PDE1C-202ENST00000396182 KDM5DQ9BY66 1539 aa21.49■■□□□ 1.03
PDE1C-202ENST00000396182 PTPRGP23470 1445 aa21.48■■□□□ 1.03
PDE1C-202ENST00000396182 LRPPRCP42704 1394 aaKnown RBP21.46■■□□□ 1.03
PDE1C-202ENST00000396182 MYBBP1AQ9BQG0 1328 aaKnown RBP21.45■■□□□ 1.02
PDE1C-202ENST00000396182 RALBP1Q15311 655 aa21.44■■□□□ 1.02
PDE1C-202ENST00000396182 BRD4O60885 1362 aaPredicted RBP21.44■■□□□ 1.02
PDE1C-202ENST00000396182 AMER1Q5JTC6 1135 aaPredicted RBP21.43■■□□□ 1.02
PDE1C-202ENST00000396182 RRP1P56182 461 aaKnown RBP21.41■■□□□ 1.02
PDE1C-202ENST00000396182 ARHGEF5Q12774 1597 aa21.4■■□□□ 1.02
PDE1C-202ENST00000396182 KTN1Q86UP2 1357 aaKnown RBP21.39■■□□□ 1.02
PDE1C-202ENST00000396182 TCERG1O14776 1098 aaKnown RBP21.39■■□□□ 1.01
PDE1C-202ENST00000396182 NBPF1Q3BBV0 1214 aa21.39■■□□□ 1.01
PDE1C-202ENST00000396182 RGL3Q3MIN7 710 aa21.39■■□□□ 1.01
PDE1C-202ENST00000396182 FAM135AQ9P2D6 1515 aa21.39■■□□□ 1.01
PDE1C-202ENST00000396182 NPM2Q86SE8 214 aaKnown RBP21.38■■□□□ 1.01
PDE1C-202ENST00000396182 EXOC6Q8TAG9 804 aa21.38■■□□□ 1.01
PDE1C-202ENST00000396182 SALL2Q9Y467 1007 aaPredicted RBP21.38■■□□□ 1.01
PDE1C-202ENST00000396182 ARXQ96QS3 562 aa21.37■■□□□ 1.01
PDE1C-202ENST00000396182 E9PCH4 1651 aa21.37■■□□□ 1.01
PDE1C-202ENST00000396182 PRAG1Q86YV5 1406 aa21.36■■□□□ 1.01
PDE1C-202ENST00000396182 CCDC141Q6ZP82 1450 aa21.36■■□□□ 1.01
PDE1C-202ENST00000396182 SAMD9LQ8IVG5 1584 aa21.36■■□□□ 1.01
PDE1C-202ENST00000396182 IL27Q8NEV9 243 aa21.35■■□□□ 1.01
PDE1C-202ENST00000396182 PDE4AP27815 886 aa21.35■■□□□ 1.01
PDE1C-202ENST00000396182 ANO8Q9HCE9 1232 aaPredicted RBP21.35■■□□□ 1.01
PDE1C-202ENST00000396182 CCDC144AA2RUR9 1427 aa21.34■■□□□ 1.01
PDE1C-202ENST00000396182 PER1O15534 1290 aaPredicted RBP21.34■■□□□ 1.01
PDE1C-202ENST00000396182 NLRP13Q86W25 1043 aa21.34■■□□□ 1.01
PDE1C-202ENST00000396182 PARD3Q8TEW0 1356 aa21.33■■□□□ 1.01
PDE1C-202ENST00000396182 CDC42BPBQ9Y5S2 1711 aa21.33■■□□□ 1
PDE1C-202ENST00000396182 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.33■■□□□ 1
PDE1C-202ENST00000396182 RSPH4AQ5TD94 716 aa21.32■■□□□ 1
PDE1C-202ENST00000396182 BACH2Q9BYV9 841 aa21.32■■□□□ 1
PDE1C-202ENST00000396182 USP35Q9P2H5 1018 aa21.32■■□□□ 1
PDE1C-202ENST00000396182 RCAN3Q9UKA8 241 aa21.32■■□□□ 1
PDE1C-202ENST00000396182 LAS1LQ9Y4W2 734 aaKnown RBP21.32■■□□□ 1
PDE1C-202ENST00000396182 PLA2R1Q13018 1463 aa21.32■■□□□ 1
PDE1C-202ENST00000396182 TRPM1Q7Z4N2 1603 aa21.32■■□□□ 1
PDE1C-202ENST00000396182 NEFMP07197 916 aa21.31■■□□□ 1
PDE1C-202ENST00000396182 MS4A1P11836 297 aa21.3■■□□□ 1
PDE1C-202ENST00000396182 PREX2Q70Z35 1606 aa21.28■■□□□ 1
PDE1C-202ENST00000396182 A2MP01023 1474 aa21.27■■□□□ 1
PDE1C-202ENST00000396182 TESK2Q96S53 571 aa21.27■■□□□ 1
PDE1C-202ENST00000396182 GPRASP1Q5JY77 1395 aa21.27■□□□□ 0.99
PDE1C-202ENST00000396182 CC2D1BQ5T0F9 858 aaKnown RBP21.26■□□□□ 0.99
PDE1C-202ENST00000396182 CDCA7LQ96GN5 454 aa21.26■□□□□ 0.99
PDE1C-202ENST00000396182 DISP3Q9P2K9 1392 aa21.26■□□□□ 0.99
PDE1C-202ENST00000396182 SYCP2Q9BX26 1530 aa21.26■□□□□ 0.99
PDE1C-202ENST00000396182 WASHC2CQ9Y4E1 1318 aa21.24■□□□□ 0.99
PDE1C-202ENST00000396182 PDE3BQ13370 1112 aa21.24■□□□□ 0.99
PDE1C-202ENST00000396182 PPM1GO15355 546 aaPredicted RBP21.23■□□□□ 0.99
PDE1C-202ENST00000396182 PANK3Q9H999 370 aa21.23■□□□□ 0.99
PDE1C-202ENST00000396182 COL17A1Q9UMD9 1497 aaPredicted RBP21.22■□□□□ 0.99
PDE1C-202ENST00000396182 PLEKHH2Q8IVE3 1493 aa21.22■□□□□ 0.99
PDE1C-202ENST00000396182 UNC13BO14795 1591 aa21.21■□□□□ 0.99
PDE1C-202ENST00000396182 ARHGAP5Q13017 1502 aa21.21■□□□□ 0.99
PDE1C-202ENST00000396182 TTC37Q6PGP7 1564 aa21.2■□□□□ 0.98
PDE1C-202ENST00000396182 PRDM15P57071 1507 aaPredicted RBP21.2■□□□□ 0.98
PDE1C-202ENST00000396182 ERBINQ96RT1 1412 aa21.18■□□□□ 0.98
PDE1C-202ENST00000396182 MAST1Q9Y2H9 1570 aa21.18■□□□□ 0.98
PDE1C-202ENST00000396182 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.18■□□□□ 0.98
PDE1C-202ENST00000396182 PLIN1O60240 522 aa21.16■□□□□ 0.98
PDE1C-202ENST00000396182 TMF1P82094 1093 aa21.16■□□□□ 0.98
PDE1C-202ENST00000396182 DDRGK1Q96HY6 314 aa21.15■□□□□ 0.98
PDE1C-202ENST00000396182 LAMC1P11047 1609 aa21.15■□□□□ 0.98
PDE1C-202ENST00000396182 IQGAP3Q86VI3 1631 aa21.15■□□□□ 0.98
PDE1C-202ENST00000396182 MYO5CQ9NQX4 1742 aa21.13■□□□□ 0.97
PDE1C-202ENST00000396182 BLMP54132 1417 aaPredicted RBP21.13■□□□□ 0.97
PDE1C-202ENST00000396182 KCNA4P22459 653 aa21.13■□□□□ 0.97
PDE1C-202ENST00000396182 SKAP1Q86WV1 359 aa21.13■□□□□ 0.97
PDE1C-202ENST00000396182 ATP10AO60312 1499 aa21.11■□□□□ 0.97
PDE1C-202ENST00000396182 CRBNQ96SW2 442 aa21.11■□□□□ 0.97
PDE1C-202ENST00000396182 PLXNC1O60486 1568 aa21.11■□□□□ 0.97
PDE1C-202ENST00000396182 ZMYM4Q5VZL5 1548 aa21.1■□□□□ 0.97
PDE1C-202ENST00000396182 EIF2AK4Q9P2K8 1649 aaKnown RBP21.09■□□□□ 0.97
PDE1C-202ENST00000396182 DUOX2Q9NRD8 1548 aa21.09■□□□□ 0.97
PDE1C-202ENST00000396182 INSRP06213 1382 aa21.09■□□□□ 0.97
PDE1C-202ENST00000396182 ADAMTS8Q9UP79 889 aa21.09■□□□□ 0.97
PDE1C-202ENST00000396182 MAGI2Q86UL8 1455 aa21.07■□□□□ 0.96
PDE1C-202ENST00000396182 GSE1Q14687 1217 aa21.06■□□□□ 0.96
PDE1C-202ENST00000396182 ERCC6L2Q5T890 1561 aa21.05■□□□□ 0.96
PDE1C-202ENST00000396182 NFKBIBQ15653 356 aa21.05■□□□□ 0.96
PDE1C-202ENST00000396182 BRPF3Q9ULD4 1205 aa21.05■□□□□ 0.96
PDE1C-202ENST00000396182 KDM2BQ8NHM5 1336 aa21.04■□□□□ 0.96
PDE1C-202ENST00000396182 WDR7Q9Y4E6 1490 aa21.03■□□□□ 0.96
PDE1C-202ENST00000396182 C20orf194Q5TEA3 1177 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms