RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 EIF4G2P78344 907 aaKnown RBP eCLIP21.75■■□□□ 1.07
RAPGEF3-203ENST00000395360 ZMYM4Q5VZL5 1548 aa21.75■■□□□ 1.07
RAPGEF3-203ENST00000395360 CCER2I3L3R5 266 aa21.75■■□□□ 1.07
RAPGEF3-203ENST00000395360 RAPGEF3O95398 923 aa21.75■■□□□ 1.07
RAPGEF3-203ENST00000395360 SPAG9O60271 1321 aaKnown RBP21.74■■□□□ 1.07
RAPGEF3-203ENST00000395360 MLH3Q9UHC1 1453 aa21.74■■□□□ 1.07
RAPGEF3-203ENST00000395360 ANKRD50Q9ULJ7 1429 aa21.73■■□□□ 1.07
RAPGEF3-203ENST00000395360 INO80Q9ULG1 1556 aaPredicted RBP21.73■■□□□ 1.07
RAPGEF3-203ENST00000395360 HECW2Q9P2P5 1572 aa21.72■■□□□ 1.07
RAPGEF3-203ENST00000395360 MAGI2Q86UL8 1455 aa21.72■■□□□ 1.07
RAPGEF3-203ENST00000395360 ZFYVE16Q7Z3T8 1539 aa21.72■■□□□ 1.07
RAPGEF3-203ENST00000395360 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
RAPGEF3-203ENST00000395360 ATP7AQ04656 1500 aa21.71■■□□□ 1.07
RAPGEF3-203ENST00000395360 NBPF8Q3BBV2 869 aa21.7■■□□□ 1.06
RAPGEF3-203ENST00000395360 PLXNC1O60486 1568 aa21.69■■□□□ 1.06
RAPGEF3-203ENST00000395360 PKD2Q13563 968 aa21.67■■□□□ 1.06
RAPGEF3-203ENST00000395360 KIDINS220Q9ULH0 1771 aa21.67■■□□□ 1.06
RAPGEF3-203ENST00000395360 MYT1LQ9UL68 1186 aa21.64■■□□□ 1.05
RAPGEF3-203ENST00000395360 NUP155O75694 1391 aa21.63■■□□□ 1.05
RAPGEF3-203ENST00000395360 SUPT16HQ9Y5B9 1047 aaKnown RBP21.63■■□□□ 1.05
RAPGEF3-203ENST00000395360 KIF15Q9NS87 1388 aa21.62■■□□□ 1.05
RAPGEF3-203ENST00000395360 DIP2CQ9Y2E4 1556 aa21.6■■□□□ 1.05
RAPGEF3-203ENST00000395360 ABCA6Q8N139 1617 aa21.6■■□□□ 1.05
RAPGEF3-203ENST00000395360 ARHGEF40Q8TER5 1519 aa21.6■■□□□ 1.05
RAPGEF3-203ENST00000395360 DUOX2Q9NRD8 1548 aa21.6■■□□□ 1.05
RAPGEF3-203ENST00000395360 C11orf95C9JLR9 678 aaPredicted RBP21.6■■□□□ 1.05
RAPGEF3-203ENST00000395360 YEATS2Q9ULM3 1422 aa21.59■■□□□ 1.05
RAPGEF3-203ENST00000395360 ATP10AO60312 1499 aa21.57■■□□□ 1.04
RAPGEF3-203ENST00000395360 REREQ9P2R6 1566 aa21.56■■□□□ 1.04
RAPGEF3-203ENST00000395360 CCDC7Q96M83 1385 aa21.56■■□□□ 1.04
RAPGEF3-203ENST00000395360 SPATA31E1Q6ZUB1 1445 aa21.56■■□□□ 1.04
RAPGEF3-203ENST00000395360 ERBINQ96RT1 1412 aa21.56■■□□□ 1.04
RAPGEF3-203ENST00000395360 A2MP01023 1474 aa21.56■■□□□ 1.04
RAPGEF3-203ENST00000395360 DHX29Q7Z478 1369 aaKnown RBP21.56■■□□□ 1.04
RAPGEF3-203ENST00000395360 CNTLNQ9NXG0 1405 aa21.55■■□□□ 1.04
RAPGEF3-203ENST00000395360 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
RAPGEF3-203ENST00000395360 KDM5DQ9BY66 1539 aa21.54■■□□□ 1.04
RAPGEF3-203ENST00000395360 EIF2AK4Q9P2K8 1649 aaKnown RBP21.51■■□□□ 1.03
RAPGEF3-203ENST00000395360 KIF7Q2M1P5 1343 aa21.49■■□□□ 1.03
RAPGEF3-203ENST00000395360 AGLP35573 1532 aa21.48■■□□□ 1.03
RAPGEF3-203ENST00000395360 BCORL1Q5H9F3 1711 aa21.48■■□□□ 1.03
RAPGEF3-203ENST00000395360 USP47Q96K76 1375 aa21.45■■□□□ 1.02
RAPGEF3-203ENST00000395360 POLR1AO95602 1720 aaPredicted RBP21.45■■□□□ 1.02
RAPGEF3-203ENST00000395360 FAM135AQ9P2D6 1515 aa21.44■■□□□ 1.02
RAPGEF3-203ENST00000395360 PRKRIP1Q9H875 184 aaPredicted RBP21.43■■□□□ 1.02
RAPGEF3-203ENST00000395360 UHRF1BP1Q6BDS2 1440 aa21.42■■□□□ 1.02
RAPGEF3-203ENST00000395360 RNF17Q9BXT8 1623 aaKnown RBP21.41■■□□□ 1.02
RAPGEF3-203ENST00000395360 KIF3BO15066 747 aa21.41■■□□□ 1.02
RAPGEF3-203ENST00000395360 DEPDC5O75140 1603 aa21.41■■□□□ 1.02
RAPGEF3-203ENST00000395360 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
RAPGEF3-203ENST00000395360 UNC13BO14795 1591 aa21.4■■□□□ 1.02
RAPGEF3-203ENST00000395360 KDM2AQ9Y2K7 1162 aa21.39■■□□□ 1.02
RAPGEF3-203ENST00000395360 CCDC184Q52MB2 194 aa21.39■■□□□ 1.01
RAPGEF3-203ENST00000395360 SIGLEC1Q9BZZ2 1709 aa21.39■■□□□ 1.01
RAPGEF3-203ENST00000395360 FKBP8Q14318 412 aa21.38■■□□□ 1.01
RAPGEF3-203ENST00000395360 DCAF11Q8TEB1 546 aa21.38■■□□□ 1.01
RAPGEF3-203ENST00000395360 RALGAPBQ86X10 1494 aa21.38■■□□□ 1.01
RAPGEF3-203ENST00000395360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.38■■□□□ 1.01
RAPGEF3-203ENST00000395360 PRDM15P57071 1507 aaPredicted RBP21.37■■□□□ 1.01
RAPGEF3-203ENST00000395360 CARD11Q9BXL7 1154 aa21.37■■□□□ 1.01
RAPGEF3-203ENST00000395360 MROH1Q8NDA8 1641 aa21.35■■□□□ 1.01
RAPGEF3-203ENST00000395360 POLR3GLQ9BT43 218 aa21.35■■□□□ 1.01
RAPGEF3-203ENST00000395360 ARID4BQ4LE39 1312 aaPredicted RBP21.34■■□□□ 1.01
RAPGEF3-203ENST00000395360 PPP6R1Q9UPN7 881 aa21.34■■□□□ 1.01
RAPGEF3-203ENST00000395360 KANK1Q14678 1352 aa21.34■■□□□ 1.01
RAPGEF3-203ENST00000395360 CCDC144AA2RUR9 1427 aa21.33■■□□□ 1.01
RAPGEF3-203ENST00000395360 BCANQ96GW7 911 aa21.33■■□□□ 1
RAPGEF3-203ENST00000395360 VWDEQ8N2E2 1590 aa21.32■■□□□ 1
RAPGEF3-203ENST00000395360 NEFLP07196 543 aa21.32■■□□□ 1
RAPGEF3-203ENST00000395360 MRS2Q9HD23 443 aa21.32■■□□□ 1
RAPGEF3-203ENST00000395360 IQGAP3Q86VI3 1631 aa21.31■■□□□ 1
RAPGEF3-203ENST00000395360 GGT6Q6P531 493 aa21.31■■□□□ 1
RAPGEF3-203ENST00000395360 FAM9BQ8IZU0 186 aa21.29■■□□□ 1
RAPGEF3-203ENST00000395360 ZC3H13Q5T200 1668 aaKnown RBP21.28■■□□□ 1
RAPGEF3-203ENST00000395360 PLA2R1Q13018 1463 aa21.28■■□□□ 1
RAPGEF3-203ENST00000395360 LMTK2Q8IWU2 1503 aa21.28■■□□□ 1
RAPGEF3-203ENST00000395360 RGL3Q3MIN7 710 aa21.27■■□□□ 1
RAPGEF3-203ENST00000395360 ST20-MTHFSA0A0A6YYL1 179 aa21.27■□□□□ 0.99
RAPGEF3-203ENST00000395360 ROCK2O75116 1388 aaKnown RBP21.27■□□□□ 0.99
RAPGEF3-203ENST00000395360 ABCC3O15438 1527 aa21.25■□□□□ 0.99
RAPGEF3-203ENST00000395360 WASHC2CQ9Y4E1 1318 aa21.24■□□□□ 0.99
RAPGEF3-203ENST00000395360 CNGB1Q14028 1251 aaPredicted RBP21.24■□□□□ 0.99
RAPGEF3-203ENST00000395360 MLECQ14165 292 aa21.24■□□□□ 0.99
RAPGEF3-203ENST00000395360 PRAG1Q86YV5 1406 aa21.23■□□□□ 0.99
RAPGEF3-203ENST00000395360 TET3O43151 1660 aa21.23■□□□□ 0.99
RAPGEF3-203ENST00000395360 CEP152O94986 1710 aa21.21■□□□□ 0.99
RAPGEF3-203ENST00000395360 ESF1Q9H501 851 aaKnown RBP21.21■□□□□ 0.99
RAPGEF3-203ENST00000395360 EFCAB6Q5THR3 1501 aa21.2■□□□□ 0.98
RAPGEF3-203ENST00000395360 CAMSAP1Q5T5Y3 1602 aa21.19■□□□□ 0.98
RAPGEF3-203ENST00000395360 TRPM1Q7Z4N2 1603 aa21.19■□□□□ 0.98
RAPGEF3-203ENST00000395360 ADAMTSL3P82987 1691 aa21.18■□□□□ 0.98
RAPGEF3-203ENST00000395360 ARHGAP31Q2M1Z3 1444 aa21.18■□□□□ 0.98
RAPGEF3-203ENST00000395360 FER1L4A9Z1Z3 1794 aa21.18■□□□□ 0.98
RAPGEF3-203ENST00000395360 CLTCQ00610 1675 aaKnown RBP21.18■□□□□ 0.98
RAPGEF3-203ENST00000395360 MROH2AA6NES4 1674 aa21.17■□□□□ 0.98
RAPGEF3-203ENST00000395360 NBPF1Q3BBV0 1214 aa21.17■□□□□ 0.98
RAPGEF3-203ENST00000395360 ZBED9Q6R2W3 1325 aa21.14■□□□□ 0.98
RAPGEF3-203ENST00000395360 MADDQ8WXG6 1647 aa21.14■□□□□ 0.97
RAPGEF3-203ENST00000395360 E9PCH4 1651 aa21.13■□□□□ 0.97
RAPGEF3-203ENST00000395360 NPATQ14207 1427 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms