RNA–Protein interactions for RNA: ENST00000395065.7

NXF3-201, Transcript of nuclear RNA export factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF3, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-201ENST00000395065 FRAT1Q92837 279 aaPredicted RBP8.36□□□□□ -1.07
NXF3-201ENST00000395065 RCAN3Q9UKA8 241 aa8.36□□□□□ -1.07
NXF3-201ENST00000395065 KIAA0586Q9BVV6 1533 aa8.36□□□□□ -1.07
NXF3-201ENST00000395065 FAM43AQ8N2R8 423 aa8.35□□□□□ -1.07
NXF3-201ENST00000395065 NUP153P49790 1475 aaKnown RBP8.35□□□□□ -1.07
NXF3-201ENST00000395065 TMC1Q8TDI8 760 aa8.35□□□□□ -1.07
NXF3-201ENST00000395065 KDM5CP41229 1560 aa8.34□□□□□ -1.07
NXF3-201ENST00000395065 CEP170Q5SW79 1584 aa8.34□□□□□ -1.07
NXF3-201ENST00000395065 DNMT1P26358 1616 aaKnown RBP8.34□□□□□ -1.08
NXF3-201ENST00000395065 INSRP06213 1382 aa8.33□□□□□ -1.08
NXF3-201ENST00000395065 KIF15Q9NS87 1388 aa8.33□□□□□ -1.08
NXF3-201ENST00000395065 CHD1O14646 1710 aa8.33□□□□□ -1.08
NXF3-201ENST00000395065 USP47Q96K76 1375 aa8.33□□□□□ -1.08
NXF3-201ENST00000395065 MYBBP1AQ9BQG0 1328 aaKnown RBP8.32□□□□□ -1.08
NXF3-201ENST00000395065 KIF14Q15058 1648 aa8.32□□□□□ -1.08
NXF3-201ENST00000395065 RALBP1Q15311 655 aa8.32□□□□□ -1.08
NXF3-201ENST00000395065 ZMYM4Q5VZL5 1548 aa8.32□□□□□ -1.08
NXF3-201ENST00000395065 DAPK1P53355 1430 aa8.31□□□□□ -1.08
NXF3-201ENST00000395065 UHRF1BP1Q6BDS2 1440 aa8.31□□□□□ -1.08
NXF3-201ENST00000395065 MAGI1Q96QZ7 1491 aaPredicted RBP8.31□□□□□ -1.08
NXF3-201ENST00000395065 EIF5BO60841 1220 aaKnown RBP8.31□□□□□ -1.08
NXF3-201ENST00000395065 KDM2BQ8NHM5 1336 aa8.3□□□□□ -1.08
NXF3-201ENST00000395065 E9PCH4 1651 aa8.3□□□□□ -1.08
NXF3-201ENST00000395065 ITSN2Q9NZM3 1697 aa8.3□□□□□ -1.08
NXF3-201ENST00000395065 ADGBQ8N7X0 1667 aa8.29□□□□□ -1.08
NXF3-201ENST00000395065 DCAF11Q8TEB1 546 aa8.29□□□□□ -1.08
NXF3-201ENST00000395065 ZNF644Q9H582 1327 aaPredicted RBP8.29□□□□□ -1.08
NXF3-201ENST00000395065 ABCC5O15440 1437 aa8.29□□□□□ -1.08
NXF3-201ENST00000395065 SYNJ2O15056 1496 aa8.29□□□□□ -1.08
NXF3-201ENST00000395065 PZPP20742 1482 aa8.29□□□□□ -1.08
NXF3-201ENST00000395065 PLB1Q6P1J6 1458 aa8.29□□□□□ -1.08
NXF3-201ENST00000395065 ADCY10Q96PN6 1610 aa8.29□□□□□ -1.08
NXF3-201ENST00000395065 CHMP7Q8WUX9 453 aaPredicted RBP8.29□□□□□ -1.08
NXF3-201ENST00000395065 PRG4Q92954 1404 aaPredicted RBP8.28□□□□□ -1.08
NXF3-201ENST00000395065 RALGAPBQ86X10 1494 aa8.28□□□□□ -1.08
NXF3-201ENST00000395065 CROCC2H7BZ55 1655 aa8.28□□□□□ -1.08
NXF3-201ENST00000395065 C8orf34Q49A92 452 aa8.28□□□□□ -1.08
NXF3-201ENST00000395065 CAMSAP2Q08AD1 1489 aa8.28□□□□□ -1.08
NXF3-201ENST00000395065 PARD3Q8TEW0 1356 aa8.27□□□□□ -1.09
NXF3-201ENST00000395065 FAM161AQ3B820 660 aa8.27□□□□□ -1.09
NXF3-201ENST00000395065 TROQ12816 1431 aaPredicted RBP8.27□□□□□ -1.09
NXF3-201ENST00000395065 FRAT2O75474 233 aaPredicted RBP8.27□□□□□ -1.09
NXF3-201ENST00000395065 NLRP13Q86W25 1043 aa8.27□□□□□ -1.09
NXF3-201ENST00000395065 KIAA1107Q9UPP5 1409 aa8.26□□□□□ -1.09
NXF3-201ENST00000395065 SENP3-EIF4A1A0A087X0R7 540 aa8.26□□□□□ -1.09
NXF3-201ENST00000395065 SLC4A3P48751 1232 aa8.26□□□□□ -1.09
NXF3-201ENST00000395065 CENPQQ7L2Z9 268 aaPredicted RBP8.26□□□□□ -1.09
NXF3-201ENST00000395065 CRBNQ96SW2 442 aa8.26□□□□□ -1.09
NXF3-201ENST00000395065 CDC42BPAQ5VT25 1732 aa8.26□□□□□ -1.09
NXF3-201ENST00000395065 BLMP54132 1417 aaPredicted RBP8.26□□□□□ -1.09
NXF3-201ENST00000395065 CDCA7LQ96GN5 454 aa8.25□□□□□ -1.09
NXF3-201ENST00000395065 PLEKHH2Q8IVE3 1493 aa8.25□□□□□ -1.09
NXF3-201ENST00000395065 NUP160Q12769 1436 aa8.25□□□□□ -1.09
NXF3-201ENST00000395065 SKAP1Q86WV1 359 aa8.25□□□□□ -1.09
NXF3-201ENST00000395065 DAXXQ9UER7 740 aaPredicted RBP8.25□□□□□ -1.09
NXF3-201ENST00000395065 ARHGEF12Q9NZN5 1544 aa8.25□□□□□ -1.09
NXF3-201ENST00000395065 GPATCH8Q9UKJ3 1502 aaKnown RBP8.24□□□□□ -1.09
NXF3-201ENST00000395065 PLIN1O60240 522 aa8.24□□□□□ -1.09
NXF3-201ENST00000395065 CARMIL2Q6F5E8 1435 aa8.24□□□□□ -1.09
NXF3-201ENST00000395065 PER1O15534 1290 aaPredicted RBP8.23□□□□□ -1.09
NXF3-201ENST00000395065 CNGB1Q14028 1251 aaPredicted RBP8.23□□□□□ -1.09
NXF3-201ENST00000395065 FOXD4L1Q9NU39 408 aa8.23□□□□□ -1.09
NXF3-201ENST00000395065 ERCC6L2Q5T890 1561 aa8.23□□□□□ -1.09
NXF3-201ENST00000395065 PKNOX2Q96KN3 472 aa8.23□□□□□ -1.09
NXF3-201ENST00000395065 POLR3GLQ9BT43 218 aa8.23□□□□□ -1.09
NXF3-201ENST00000395065 RRAGDQ9NQL2 400 aaPredicted RBP8.23□□□□□ -1.09
NXF3-201ENST00000395065 CFDP1Q9UEE9 299 aaPredicted RBP8.23□□□□□ -1.09
NXF3-201ENST00000395065 ABCA8O94911 1581 aa8.22□□□□□ -1.09
NXF3-201ENST00000395065 JPH4Q96JJ6 628 aa8.22□□□□□ -1.09
NXF3-201ENST00000395065 ZNF777Q9ULD5 760 aaPredicted RBP8.22□□□□□ -1.09
NXF3-201ENST00000395065 VIRMAQ69YN4 1812 aaKnown RBP8.22□□□□□ -1.09
NXF3-201ENST00000395065 GLIPR1L2Q4G1C9 344 aa8.21□□□□□ -1.09
NXF3-201ENST00000395065 ADGRL2O95490 1459 aa8.21□□□□□ -1.1
NXF3-201ENST00000395065 CLASP1Q7Z460 1538 aa8.21□□□□□ -1.1
NXF3-201ENST00000395065 ST20-MTHFSA0A0A6YYL1 179 aa8.21□□□□□ -1.1
NXF3-201ENST00000395065 L1TD1Q5T7N2 865 aaKnown RBP8.21□□□□□ -1.1
NXF3-201ENST00000395065 CARD11Q9BXL7 1154 aa8.21□□□□□ -1.1
NXF3-201ENST00000395065 USP19O94966 1318 aa8.2□□□□□ -1.1
NXF3-201ENST00000395065 C20orf194Q5TEA3 1177 aa8.2□□□□□ -1.1
NXF3-201ENST00000395065 ATP10BO94823 1461 aa8.19□□□□□ -1.1
NXF3-201ENST00000395065 ABCC10Q5T3U5 1492 aa8.19□□□□□ -1.1
NXF3-201ENST00000395065 POGKQ9P215 609 aa8.19□□□□□ -1.1
NXF3-201ENST00000395065 CLCN1P35523 988 aa8.18□□□□□ -1.1
NXF3-201ENST00000395065 PKD2Q13563 968 aa8.18□□□□□ -1.1
NXF3-201ENST00000395065 DUSP27Q5VZP5 1158 aa8.18□□□□□ -1.1
NXF3-201ENST00000395065 ZNF521Q96K83 1311 aa8.18□□□□□ -1.1
NXF3-201ENST00000395065 ANTXR1Q9H6X2 564 aa8.17□□□□□ -1.1
NXF3-201ENST00000395065 CDC42BPBQ9Y5S2 1711 aa8.17□□□□□ -1.1
NXF3-201ENST00000395065 ANKRD30AQ9BXX3 1397 aa8.17□□□□□ -1.1
NXF3-201ENST00000395065 FSD2A1L4K1 749 aa8.17□□□□□ -1.1
NXF3-201ENST00000395065 RRP9O43818 475 aaKnown RBP8.17□□□□□ -1.1
NXF3-201ENST00000395065 ZNF326Q5BKZ1 582 aaKnown RBP8.17□□□□□ -1.1
NXF3-201ENST00000395065 SHANK2Q9UPX8 1470 aa8.16□□□□□ -1.1
NXF3-201ENST00000395065 KDM5DQ9BY66 1539 aa8.16□□□□□ -1.1
NXF3-201ENST00000395065 C9orf84Q5VXU9 1444 aa8.16□□□□□ -1.1
NXF3-201ENST00000395065 ANKRD50Q9ULJ7 1429 aa8.16□□□□□ -1.1
NXF3-201ENST00000395065 PLEKHD1A6NEE1 506 aa8.16□□□□□ -1.1
NXF3-201ENST00000395065 EIF3AQ14152 1382 aaKnown RBP8.16□□□□□ -1.1
NXF3-201ENST00000395065 PREX2Q70Z35 1606 aa8.15□□□□□ -1.1
NXF3-201ENST00000395065 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms