RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 CCDC7Q96M83 1385 aa14.66□□□□□ -0.06
HIF1A-203ENST00000394997 HSPA5P11021 654 aaKnown RBP14.66□□□□□ -0.06
HIF1A-203ENST00000394997 CCER2I3L3R5 266 aa14.65□□□□□ -0.06
HIF1A-203ENST00000394997 CDK11AQ9UQ88 783 aaPredicted RBP14.65□□□□□ -0.06
HIF1A-203ENST00000394997 DDX10Q13206 875 aaKnown RBP14.65□□□□□ -0.06
HIF1A-203ENST00000394997 KIAA1210Q9ULL0 1709 aa14.65□□□□□ -0.06
HIF1A-203ENST00000394997 TRAPPC8Q9Y2L5 1435 aa14.65□□□□□ -0.06
HIF1A-203ENST00000394997 TRPM2O94759 1503 aa14.64□□□□□ -0.07
HIF1A-203ENST00000394997 PLEKHH2Q8IVE3 1493 aa14.63□□□□□ -0.07
HIF1A-203ENST00000394997 SIGLEC1Q9BZZ2 1709 aa14.62□□□□□ -0.07
HIF1A-203ENST00000394997 ZC3H13Q5T200 1668 aaKnown RBP14.62□□□□□ -0.07
HIF1A-203ENST00000394997 GPRASP1Q5JY77 1395 aa14.62□□□□□ -0.07
HIF1A-203ENST00000394997 FBLN2P98095 1184 aa14.61□□□□□ -0.07
HIF1A-203ENST00000394997 PRAG1Q86YV5 1406 aa14.61□□□□□ -0.07
HIF1A-203ENST00000394997 WDR7Q9Y4E6 1490 aa14.61□□□□□ -0.07
HIF1A-203ENST00000394997 PPRC1Q5VV67 1664 aaKnown RBP14.61□□□□□ -0.07
HIF1A-203ENST00000394997 RTEL1-TNFRSF6BF6WH68 1400 aa14.61□□□□□ -0.07
HIF1A-203ENST00000394997 PTPRTO14522 1441 aa14.6□□□□□ -0.07
HIF1A-203ENST00000394997 PLEKHD1A6NEE1 506 aa14.59□□□□□ -0.07
HIF1A-203ENST00000394997 HNRNPMP52272 730 aaKnown RBP eCLIP14.59□□□□□ -0.078e-8■□□□□ 11.2
HIF1A-203ENST00000394997 ATP7AQ04656 1500 aa14.58□□□□□ -0.08
HIF1A-203ENST00000394997 BCANQ96GW7 911 aa14.58□□□□□ -0.08
HIF1A-203ENST00000394997 RICTORQ6R327 1708 aa14.58□□□□□ -0.08
HIF1A-203ENST00000394997 MYO3AQ8NEV4 1616 aa14.58□□□□□ -0.08
HIF1A-203ENST00000394997 KIF7Q2M1P5 1343 aa14.58□□□□□ -0.08
HIF1A-203ENST00000394997 CCDC184Q52MB2 194 aa14.58□□□□□ -0.08
HIF1A-203ENST00000394997 MAP3K4Q9Y6R4 1608 aa14.57□□□□□ -0.08
HIF1A-203ENST00000394997 LMTK2Q8IWU2 1503 aa14.57□□□□□ -0.08
HIF1A-203ENST00000394997 ERICH6Q7L0X2 663 aa14.56□□□□□ -0.08
HIF1A-203ENST00000394997 PIK3C2BO00750 1634 aa14.55□□□□□ -0.08
HIF1A-203ENST00000394997 ABCA6Q8N139 1617 aa14.55□□□□□ -0.08
HIF1A-203ENST00000394997 SUPT16HQ9Y5B9 1047 aaKnown RBP14.55□□□□□ -0.08
HIF1A-203ENST00000394997 PPLO60437 1756 aa14.54□□□□□ -0.08
HIF1A-203ENST00000394997 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
HIF1A-203ENST00000394997 PKD2Q13563 968 aa14.53□□□□□ -0.08
HIF1A-203ENST00000394997 NRXN1Q9ULB1 1477 aa14.53□□□□□ -0.08
HIF1A-203ENST00000394997 NUP155O75694 1391 aa14.53□□□□□ -0.08
HIF1A-203ENST00000394997 EFCAB6Q5THR3 1501 aa14.53□□□□□ -0.08
HIF1A-203ENST00000394997 ZNF518AQ6AHZ1 1483 aa14.52□□□□□ -0.08
HIF1A-203ENST00000394997 TRIM52Q96A61 297 aa14.5□□□□□ -0.09
HIF1A-203ENST00000394997 USP47Q96K76 1375 aa14.5□□□□□ -0.09
HIF1A-203ENST00000394997 COL17A1Q9UMD9 1497 aaPredicted RBP14.5□□□□□ -0.09
HIF1A-203ENST00000394997 HECW2Q9P2P5 1572 aa14.5□□□□□ -0.09
HIF1A-203ENST00000394997 CFAP74Q9C0B2 1584 aa14.49□□□□□ -0.09
HIF1A-203ENST00000394997 RSPH4AQ5TD94 716 aa14.49□□□□□ -0.09
HIF1A-203ENST00000394997 KIF1BO60333 1816 aa14.48□□□□□ -0.09
HIF1A-203ENST00000394997 FANCAO15360 1455 aa14.47□□□□□ -0.09
HIF1A-203ENST00000394997 EIF4G2P78344 907 aaKnown RBP eCLIP14.47□□□□□ -0.09
HIF1A-203ENST00000394997 ASXL2Q76L83 1435 aa14.46□□□□□ -0.09
HIF1A-203ENST00000394997 ADGRB3O60242 1522 aa14.46□□□□□ -0.09
HIF1A-203ENST00000394997 UGGT1Q9NYU2 1555 aa14.46□□□□□ -0.09
HIF1A-203ENST00000394997 PRKRIP1Q9H875 184 aaPredicted RBP14.46□□□□□ -0.1
HIF1A-203ENST00000394997 ZNF777Q9ULD5 760 aaPredicted RBP14.45□□□□□ -0.1
HIF1A-203ENST00000394997 ARID4BQ4LE39 1312 aaPredicted RBP14.44□□□□□ -0.1
HIF1A-203ENST00000394997 CAMSAP1Q5T5Y3 1602 aa14.44□□□□□ -0.1
HIF1A-203ENST00000394997 NEFLP07196 543 aa14.44□□□□□ -0.1
HIF1A-203ENST00000394997 DIP2CQ9Y2E4 1556 aa14.42□□□□□ -0.1
HIF1A-203ENST00000394997 SYNMO15061 1565 aa14.42□□□□□ -0.1
HIF1A-203ENST00000394997 MYO5BQ9ULV0 1848 aa14.42□□□□□ -0.1
HIF1A-203ENST00000394997 LRPPRCP42704 1394 aaKnown RBP14.42□□□□□ -0.1
HIF1A-203ENST00000394997 MYOM2P54296 1465 aa14.41□□□□□ -0.1
HIF1A-203ENST00000394997 GLI2P10070 1586 aa14.41□□□□□ -0.1
HIF1A-203ENST00000394997 SCAPERQ9BY12 1400 aa14.4□□□□□ -0.1
HIF1A-203ENST00000394997 TESK2Q96S53 571 aa14.4□□□□□ -0.1
HIF1A-203ENST00000394997 MLH3Q9UHC1 1453 aa14.39□□□□□ -0.11
HIF1A-203ENST00000394997 ADGRB1O14514 1584 aa14.39□□□□□ -0.11
HIF1A-203ENST00000394997 SETBP1Q9Y6X0 1596 aa14.39□□□□□ -0.11
HIF1A-203ENST00000394997 SETD1AO15047 1707 aaKnown RBP14.38□□□□□ -0.11
HIF1A-203ENST00000394997 ZMYM4Q5VZL5 1548 aa14.38□□□□□ -0.11
HIF1A-203ENST00000394997 ADGRL1O94910 1474 aa14.38□□□□□ -0.11
HIF1A-203ENST00000394997 POGZQ7Z3K3 1410 aa14.38□□□□□ -0.11
HIF1A-203ENST00000394997 CCDC144AA2RUR9 1427 aa14.37□□□□□ -0.11
HIF1A-203ENST00000394997 PER1O15534 1290 aaPredicted RBP14.36□□□□□ -0.11
HIF1A-203ENST00000394997 DISP3Q9P2K9 1392 aa14.36□□□□□ -0.11
HIF1A-203ENST00000394997 ARHGEF28Q8N1W1 1705 aaKnown RBP14.36□□□□□ -0.11
HIF1A-203ENST00000394997 PARD3Q8TEW0 1356 aa14.36□□□□□ -0.11
HIF1A-203ENST00000394997 BCL11AQ9H165 835 aa14.35□□□□□ -0.11
HIF1A-203ENST00000394997 ABCC3O15438 1527 aa14.35□□□□□ -0.11
HIF1A-203ENST00000394997 ANP32CO43423 234 aa14.35□□□□□ -0.11
HIF1A-203ENST00000394997 SHPRHQ149N8 1683 aa14.34□□□□□ -0.11
HIF1A-203ENST00000394997 TSPY4P0CV99 314 aa14.34□□□□□ -0.11
HIF1A-203ENST00000394997 TSPY10P0CW01 314 aa14.34□□□□□ -0.11
HIF1A-203ENST00000394997 KIF13AQ9H1H9 1805 aa14.33□□□□□ -0.12
HIF1A-203ENST00000394997 KDM5AP29375 1690 aaKnown RBP14.32□□□□□ -0.12
HIF1A-203ENST00000394997 NBPF1Q3BBV0 1214 aa14.32□□□□□ -0.12
HIF1A-203ENST00000394997 USP32Q8NFA0 1604 aa14.32□□□□□ -0.12
HIF1A-203ENST00000394997 RNF123Q5XPI4 1314 aa14.32□□□□□ -0.12
HIF1A-203ENST00000394997 DIP2BQ9P265 1576 aa14.32□□□□□ -0.12
HIF1A-203ENST00000394997 RIMBP3CA6NJZ7 1639 aa14.31□□□□□ -0.12
HIF1A-203ENST00000394997 RIMBP3BA6NNM3 1639 aa14.31□□□□□ -0.12
HIF1A-203ENST00000394997 RIMBP3Q9UFD9 1639 aa14.31□□□□□ -0.12
HIF1A-203ENST00000394997 PREX1Q8TCU6 1659 aa14.31□□□□□ -0.12
HIF1A-203ENST00000394997 QRICH2Q9H0J4 1663 aa14.31□□□□□ -0.12
HIF1A-203ENST00000394997 REREQ9P2R6 1566 aa14.31□□□□□ -0.12
HIF1A-203ENST00000394997 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
HIF1A-203ENST00000394997 AFAP1Q8N556 730 aa14.3□□□□□ -0.12
HIF1A-203ENST00000394997 ASXL1Q8IXJ9 1541 aa14.3□□□□□ -0.12
HIF1A-203ENST00000394997 ROCK2O75116 1388 aaKnown RBP14.28□□□□□ -0.12
HIF1A-203ENST00000394997 ANP32EQ9BTT0 268 aa14.28□□□□□ -0.12
HIF1A-203ENST00000394997 TMEM131LA2VDJ0 1609 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms