RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 E9PSI1 815 aa21.42■■□□□ 1.02
SIN3A-203ENST00000394949 JPH4Q96JJ6 628 aa21.41■■□□□ 1.02
SIN3A-203ENST00000394949 WIZO95785 1651 aa21.41■■□□□ 1.02
SIN3A-203ENST00000394949 CCDC18Q5T9S5 1454 aa21.4■■□□□ 1.02
SIN3A-203ENST00000394949 CLUAP1Q96AJ1 413 aa21.4■■□□□ 1.02
SIN3A-203ENST00000394949 TERF2IPQ9NYB0 399 aa21.4■■□□□ 1.02
SIN3A-203ENST00000394949 DDX49Q9Y6V7 483 aaKnown RBP21.4■■□□□ 1.02
SIN3A-203ENST00000394949 HNRNPMP52272 730 aaKnown RBP eCLIP21.39■■□□□ 1.01
SIN3A-203ENST00000394949 APBB1O00213 710 aa21.39■■□□□ 1.01
SIN3A-203ENST00000394949 TNNT3P45378 269 aaPredicted RBP21.38■■□□□ 1.01
SIN3A-203ENST00000394949 TPM4P67936 248 aa21.38■■□□□ 1.01
SIN3A-203ENST00000394949 CHMP5Q9NZZ3 219 aa21.38■■□□□ 1.01
SIN3A-203ENST00000394949 FHOD3Q2V2M9 1422 aa21.38■■□□□ 1.01
SIN3A-203ENST00000394949 CCDC146Q8IYE0 955 aa21.37■■□□□ 1.01
SIN3A-203ENST00000394949 ST20-MTHFSA0A0A6YYL1 179 aa21.37■■□□□ 1.01
SIN3A-203ENST00000394949 PLIN1O60240 522 aa21.36■■□□□ 1.01
SIN3A-203ENST00000394949 USP47Q96K76 1375 aa21.36■■□□□ 1.01
SIN3A-203ENST00000394949 PAK3O75914 559 aaPredicted RBP21.34■■□□□ 1.01
SIN3A-203ENST00000394949 NFKBIBQ15653 356 aa21.34■■□□□ 1.01
SIN3A-203ENST00000394949 CNTLNQ9NXG0 1405 aa21.34■■□□□ 1.01
SIN3A-203ENST00000394949 WASHC2CQ9Y4E1 1318 aa21.33■■□□□ 1.01
SIN3A-203ENST00000394949 FOXD4L1Q9NU39 408 aa21.32■■□□□ 1
SIN3A-203ENST00000394949 CCDC7Q96M83 1385 aa21.32■■□□□ 1
SIN3A-203ENST00000394949 AAMPQ13685 434 aa21.32■■□□□ 1
SIN3A-203ENST00000394949 PANK3Q9H999 370 aa21.32■■□□□ 1
SIN3A-203ENST00000394949 LMOD3Q0VAK6 560 aa21.31■■□□□ 1
SIN3A-203ENST00000394949 ZKSCAN2Q63HK3 967 aa21.31■■□□□ 1
SIN3A-203ENST00000394949 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.31■■□□□ 1
SIN3A-203ENST00000394949 HDAC5Q9UQL6 1122 aa21.31■■□□□ 1
SIN3A-203ENST00000394949 EID1Q9Y6B2 187 aa21.31■■□□□ 1
SIN3A-203ENST00000394949 RUSC2Q8N2Y8 1516 aa21.3■■□□□ 1
SIN3A-203ENST00000394949 ATAD2BQ9ULI0 1458 aa21.3■■□□□ 1
SIN3A-203ENST00000394949 CSB-PGBD3P0DP91 1061 aa21.3■■□□□ 1
SIN3A-203ENST00000394949 AMER1Q5JTC6 1135 aaPredicted RBP21.29■■□□□ 1
SIN3A-203ENST00000394949 STK31Q9BXU1 1019 aa21.29■■□□□ 1
SIN3A-203ENST00000394949 GNL2Q13823 731 aaKnown RBP21.29■■□□□ 1
SIN3A-203ENST00000394949 TAOK2Q9UL54 1235 aa21.29■■□□□ 1
SIN3A-203ENST00000394949 ATP6V1DQ9Y5K8 247 aa21.28■■□□□ 1
SIN3A-203ENST00000394949 FAM43AQ8N2R8 423 aa21.27■■□□□ 1
SIN3A-203ENST00000394949 GPATCH3Q96I76 525 aa21.27■■□□□ 1
SIN3A-203ENST00000394949 TRIM6-TRIM34B2RNG4 842 aa21.26■□□□□ 0.99
SIN3A-203ENST00000394949 KIF16BQ96L93 1317 aa21.25■□□□□ 0.99
SIN3A-203ENST00000394949 MRE11P49959 708 aa21.25■□□□□ 0.99
SIN3A-203ENST00000394949 UACAQ9BZF9 1416 aa21.25■□□□□ 0.99
SIN3A-203ENST00000394949 CCDC34Q96HJ3 373 aa21.25■□□□□ 0.99
SIN3A-203ENST00000394949 COG6Q9Y2V7 657 aa21.25■□□□□ 0.99
SIN3A-203ENST00000394949 CCDC144AA2RUR9 1427 aa21.24■□□□□ 0.99
SIN3A-203ENST00000394949 GOLGA6L1Q8N7Z2 621 aa21.24■□□□□ 0.99
SIN3A-203ENST00000394949 DDX19BQ9UMR2 479 aa21.22■□□□□ 0.99
SIN3A-203ENST00000394949 NGDNQ8NEJ9 315 aaKnown RBP21.22■□□□□ 0.99
SIN3A-203ENST00000394949 KIF3AQ9Y496 699 aa21.22■□□□□ 0.99
SIN3A-203ENST00000394949 KIF7Q2M1P5 1343 aa21.22■□□□□ 0.99
SIN3A-203ENST00000394949 MAP7D2Q96T17 732 aa21.22■□□□□ 0.99
SIN3A-203ENST00000394949 MTERF4Q7Z6M4 381 aaKnown RBP21.21■□□□□ 0.99
SIN3A-203ENST00000394949 BRD4O60885 1362 aaPredicted RBP21.2■□□□□ 0.98
SIN3A-203ENST00000394949 TULP1O00294 542 aaPredicted RBP21.2■□□□□ 0.98
SIN3A-203ENST00000394949 ANKRD45Q5TZF3 282 aa21.2■□□□□ 0.98
SIN3A-203ENST00000394949 NUCB2P80303 420 aa21.18■□□□□ 0.98
SIN3A-203ENST00000394949 REC8O95072 547 aa21.18■□□□□ 0.98
SIN3A-203ENST00000394949 PTPRGP23470 1445 aa21.18■□□□□ 0.98
SIN3A-203ENST00000394949 APAF1O14727 1248 aa21.17■□□□□ 0.98
SIN3A-203ENST00000394949 TRAK1Q9UPV9 953 aa21.17■□□□□ 0.98
SIN3A-203ENST00000394949 FAM13BQ9NYF5 915 aa21.16■□□□□ 0.98
SIN3A-203ENST00000394949 VGFO15240 615 aaPredicted RBP21.16■□□□□ 0.98
SIN3A-203ENST00000394949 AMPHP49418 695 aa21.16■□□□□ 0.98
SIN3A-203ENST00000394949 NOL8Q76FK4 1167 aaKnown RBP21.15■□□□□ 0.98
SIN3A-203ENST00000394949 KIF21BO75037 1637 aa21.15■□□□□ 0.98
SIN3A-203ENST00000394949 RRP7AQ9Y3A4 280 aaKnown RBP21.15■□□□□ 0.98
SIN3A-203ENST00000394949 CHMP4CQ96CF2 233 aa21.14■□□□□ 0.98
SIN3A-203ENST00000394949 WASHC2AQ641Q2 1341 aa21.14■□□□□ 0.98
SIN3A-203ENST00000394949 FANCD2Q9BXW9 1451 aa21.14■□□□□ 0.97
SIN3A-203ENST00000394949 DZIP1LQ8IYY4 767 aaKnown RBP21.14■□□□□ 0.97
SIN3A-203ENST00000394949 BCL2L13Q9BXK5 485 aa21.14■□□□□ 0.97
SIN3A-203ENST00000394949 ZNF330Q9Y3S2 320 aaPredicted RBP21.14■□□□□ 0.97
SIN3A-203ENST00000394949 FGD6Q6ZV73 1430 aa21.14■□□□□ 0.97
SIN3A-203ENST00000394949 TPM2P07951 284 aa21.13■□□□□ 0.97
SIN3A-203ENST00000394949 C22orf23Q9BZE7 217 aa21.13■□□□□ 0.97
SIN3A-203ENST00000394949 MIA2Q96PC5 1412 aa21.13■□□□□ 0.97
SIN3A-203ENST00000394949 HSP90B1P14625 803 aaKnown RBP21.12■□□□□ 0.97
SIN3A-203ENST00000394949 GOLGA6L19H0YKK7 550 aa21.12■□□□□ 0.97
SIN3A-203ENST00000394949 NUTM2DQ5VT03 806 aaPredicted RBP21.12■□□□□ 0.97
SIN3A-203ENST00000394949 FOXD4L5Q5VV16 416 aaPredicted RBP21.12■□□□□ 0.97
SIN3A-203ENST00000394949 FOXD4L4Q8WXT5 416 aaPredicted RBP21.12■□□□□ 0.97
SIN3A-203ENST00000394949 RRBP1Q9P2E9 1410 aaKnown RBP21.12■□□□□ 0.97
SIN3A-203ENST00000394949 ISY1Q9ULR0 285 aaKnown RBP21.11■□□□□ 0.97
SIN3A-203ENST00000394949 SLC4A10Q6U841 1118 aa21.1■□□□□ 0.97
SIN3A-203ENST00000394949 GORABQ5T7V8 394 aa21.1■□□□□ 0.97
SIN3A-203ENST00000394949 ZNF771Q7L3S4 317 aaPredicted RBP21.09■□□□□ 0.97
SIN3A-203ENST00000394949 CUX1P39880 1505 aa21.09■□□□□ 0.97
SIN3A-203ENST00000394949 BRPF3Q9ULD4 1205 aa21.09■□□□□ 0.97
SIN3A-203ENST00000394949 BACH2Q9BYV9 841 aa21.08■□□□□ 0.97
SIN3A-203ENST00000394949 SMARCA4P51532 1647 aa21.08■□□□□ 0.96
SIN3A-203ENST00000394949 BECN2A8MW95 431 aa21.08■□□□□ 0.96
SIN3A-203ENST00000394949 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.08■□□□□ 0.96
SIN3A-203ENST00000394949 GPS2Q13227 327 aa21.07■□□□□ 0.96
SIN3A-203ENST00000394949 MYOM3Q5VTT5 1437 aa21.07■□□□□ 0.96
SIN3A-203ENST00000394949 EVC2Q86UK5 1308 aa21.06■□□□□ 0.96
SIN3A-203ENST00000394949 TRAK2O60296 914 aa21.06■□□□□ 0.96
SIN3A-203ENST00000394949 TPM3P06753 285 aa21.06■□□□□ 0.96
SIN3A-203ENST00000394949 NASPP49321 788 aaPredicted RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms