RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CLUAP1Q96AJ1 413 aa12.98□□□□□ -0.33
COL4A6-203ENST00000394872 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
COL4A6-203ENST00000394872 RASSF8Q8NHQ8 419 aa12.98□□□□□ -0.33
COL4A6-203ENST00000394872 TPM4P67936 248 aa12.97□□□□□ -0.33
COL4A6-203ENST00000394872 C1orf141Q5JVX7 400 aa12.97□□□□□ -0.33
COL4A6-203ENST00000394872 CENPJQ9HC77 1338 aaPredicted RBP12.97□□□□□ -0.33
COL4A6-203ENST00000394872 MSH5O43196 834 aa12.96□□□□□ -0.33
COL4A6-203ENST00000394872 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.33
COL4A6-203ENST00000394872 CCDC34Q96HJ3 373 aa12.96□□□□□ -0.34
COL4A6-203ENST00000394872 CADPSQ9ULU8 1353 aa12.96□□□□□ -0.34
COL4A6-203ENST00000394872 NOC3LQ8WTT2 800 aaKnown RBP12.96□□□□□ -0.34
COL4A6-203ENST00000394872 CYB5RLQ6IPT4 315 aa12.95□□□□□ -0.34
COL4A6-203ENST00000394872 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
COL4A6-203ENST00000394872 SYAP1Q96A49 352 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-203ENST00000394872 SLKQ9H2G2 1235 aaPredicted RBP12.95□□□□□ -0.34
COL4A6-203ENST00000394872 COG3Q96JB2 828 aa12.95□□□□□ -0.34
COL4A6-203ENST00000394872 VPS53Q5VIR6 699 aa12.95□□□□□ -0.34
COL4A6-203ENST00000394872 UACAQ9BZF9 1416 aa12.94□□□□□ -0.34
COL4A6-203ENST00000394872 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
COL4A6-203ENST00000394872 TOP2AP11388 1531 aaKnown RBP12.94□□□□□ -0.34
COL4A6-203ENST00000394872 WIZO95785 1651 aa12.94□□□□□ -0.34
COL4A6-203ENST00000394872 CCDC144AA2RUR9 1427 aa12.94□□□□□ -0.34
COL4A6-203ENST00000394872 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.94□□□□□ -0.34
COL4A6-203ENST00000394872 RRP7AQ9Y3A4 280 aaKnown RBP12.94□□□□□ -0.34
COL4A6-203ENST00000394872 NLRP13Q86W25 1043 aa12.93□□□□□ -0.34
COL4A6-203ENST00000394872 TCERG1O14776 1098 aaKnown RBP12.93□□□□□ -0.34
COL4A6-203ENST00000394872 MARCH6O60337 910 aa12.93□□□□□ -0.34
COL4A6-203ENST00000394872 MEX3CQ5U5Q3 659 aaKnown RBP12.92□□□□□ -0.34
COL4A6-203ENST00000394872 PRM3Q9NNZ6 103 aa12.92□□□□□ -0.34
COL4A6-203ENST00000394872 CREBRFQ8IUR6 639 aa12.92□□□□□ -0.34
COL4A6-203ENST00000394872 VGFO15240 615 aaPredicted RBP12.92□□□□□ -0.34
COL4A6-203ENST00000394872 CSPP1Q1MSJ5 1256 aa12.92□□□□□ -0.34
COL4A6-203ENST00000394872 RBM19Q9Y4C8 960 aaKnown RBP12.91□□□□□ -0.34
COL4A6-203ENST00000394872 EVC2Q86UK5 1308 aa12.91□□□□□ -0.34
COL4A6-203ENST00000394872 KIF15Q9NS87 1388 aa12.91□□□□□ -0.34
COL4A6-203ENST00000394872 FOXD4L1Q9NU39 408 aa12.91□□□□□ -0.34
COL4A6-203ENST00000394872 PHLDB1Q86UU1 1377 aa12.9□□□□□ -0.34
COL4A6-203ENST00000394872 PANK3Q9H999 370 aa12.9□□□□□ -0.34
COL4A6-203ENST00000394872 PDE4CQ08493 712 aa12.9□□□□□ -0.34
COL4A6-203ENST00000394872 DEKP35659 375 aaKnown RBP12.9□□□□□ -0.34
COL4A6-203ENST00000394872 NGEFQ8N5V2 710 aa12.9□□□□□ -0.34
COL4A6-203ENST00000394872 AEBP2Q6ZN18 517 aaPredicted RBP12.9□□□□□ -0.34
COL4A6-203ENST00000394872 KIF16BQ96L93 1317 aa12.9□□□□□ -0.35
COL4A6-203ENST00000394872 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
COL4A6-203ENST00000394872 PTPRGP23470 1445 aa12.89□□□□□ -0.35
COL4A6-203ENST00000394872 MINK1Q8N4C8 1332 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-203ENST00000394872 TEFQ10587 303 aa12.89□□□□□ -0.35
COL4A6-203ENST00000394872 ELL2O00472 640 aaPredicted RBP12.89□□□□□ -0.35
COL4A6-203ENST00000394872 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
COL4A6-203ENST00000394872 RILPL2Q969X0 211 aa12.88□□□□□ -0.35
COL4A6-203ENST00000394872 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
COL4A6-203ENST00000394872 PDE3BQ13370 1112 aa12.88□□□□□ -0.35
COL4A6-203ENST00000394872 OSCARQ8IYS5 282 aa12.87□□□□□ -0.35
COL4A6-203ENST00000394872 ST18O60284 1047 aa12.87□□□□□ -0.35
COL4A6-203ENST00000394872 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
COL4A6-203ENST00000394872 PSME1Q06323 249 aa12.87□□□□□ -0.35
COL4A6-203ENST00000394872 SYTL4Q96C24 671 aaPredicted RBP12.87□□□□□ -0.35
COL4A6-203ENST00000394872 SF3A1Q15459 793 aaKnown RBP12.86□□□□□ -0.35
COL4A6-203ENST00000394872 KIF3AQ9Y496 699 aa12.86□□□□□ -0.35
COL4A6-203ENST00000394872 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
COL4A6-203ENST00000394872 TRIM34Q9BYJ4 488 aa12.86□□□□□ -0.35
COL4A6-203ENST00000394872 NOL10Q9BSC4 688 aaKnown RBP12.86□□□□□ -0.35
COL4A6-203ENST00000394872 NEXNQ0ZGT2 675 aa12.85□□□□□ -0.35
COL4A6-203ENST00000394872 FOXD4L5Q5VV16 416 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-203ENST00000394872 FOXD4L4Q8WXT5 416 aaPredicted RBP12.85□□□□□ -0.35
COL4A6-203ENST00000394872 FANCD2Q9BXW9 1451 aa12.85□□□□□ -0.35
COL4A6-203ENST00000394872 H3BQV1 296 aa12.85□□□□□ -0.35
COL4A6-203ENST00000394872 IFFO2Q5TF58 517 aa12.85□□□□□ -0.35
COL4A6-203ENST00000394872 AKAP17AQ02040 695 aaKnown RBP12.84□□□□□ -0.35
COL4A6-203ENST00000394872 BCL2L13Q9BXK5 485 aa12.84□□□□□ -0.35
COL4A6-203ENST00000394872 RAD21O60216 631 aa12.84□□□□□ -0.35
COL4A6-203ENST00000394872 AMOTL1Q8IY63 956 aa12.84□□□□□ -0.35
COL4A6-203ENST00000394872 ANKRD45Q5TZF3 282 aa12.84□□□□□ -0.35
COL4A6-203ENST00000394872 CEP89Q96ST8 783 aa12.83□□□□□ -0.36
COL4A6-203ENST00000394872 C9orf78Q9NZ63 289 aaPredicted RBP12.83□□□□□ -0.36
COL4A6-203ENST00000394872 A0A0U1RQG5 324 aaPredicted RBP12.83□□□□□ -0.36
COL4A6-203ENST00000394872 FAM184AQ8NB25 1140 aa12.83□□□□□ -0.36
COL4A6-203ENST00000394872 CTDP1Q9Y5B0 961 aaPredicted RBP12.83□□□□□ -0.36
COL4A6-203ENST00000394872 GOLGA6L3A6NEY3 463 aa12.82□□□□□ -0.36
COL4A6-203ENST00000394872 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
COL4A6-203ENST00000394872 NECTIN2Q92692 538 aa12.82□□□□□ -0.36
COL4A6-203ENST00000394872 SYNE3Q6ZMZ3 975 aa12.82□□□□□ -0.36
COL4A6-203ENST00000394872 PES1O00541 588 aaKnown RBP12.81□□□□□ -0.36
COL4A6-203ENST00000394872 FAM69CQ0P6D2 419 aa12.81□□□□□ -0.36
COL4A6-203ENST00000394872 TPD52L1Q16890 204 aaPredicted RBP12.81□□□□□ -0.36
COL4A6-203ENST00000394872 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
COL4A6-203ENST00000394872 PHF14O94880 888 aa12.81□□□□□ -0.36
COL4A6-203ENST00000394872 ZKSCAN2Q63HK3 967 aa12.81□□□□□ -0.36
COL4A6-203ENST00000394872 TCEAL9Q9UHQ7 104 aa12.81□□□□□ -0.36
COL4A6-203ENST00000394872 VPS37DQ86XT2 251 aa12.8□□□□□ -0.36
COL4A6-203ENST00000394872 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.8□□□□□ -0.36
COL4A6-203ENST00000394872 E9PSI1 815 aa12.8□□□□□ -0.36
COL4A6-203ENST00000394872 ARID3AQ99856 593 aa12.8□□□□□ -0.36
COL4A6-203ENST00000394872 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
COL4A6-203ENST00000394872 DIAPH3Q9NSV4 1193 aa12.8□□□□□ -0.36
COL4A6-203ENST00000394872 ATF3P18847 181 aa12.79□□□□□ -0.36
COL4A6-203ENST00000394872 ANO8Q9HCE9 1232 aaPredicted RBP12.79□□□□□ -0.36
COL4A6-203ENST00000394872 TPM3P06753 285 aa12.79□□□□□ -0.36
COL4A6-203ENST00000394872 ATAD2BQ9ULI0 1458 aa12.79□□□□□ -0.36
COL4A6-203ENST00000394872 CHMP4CQ96CF2 233 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms