RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 HMMRO75330 724 aa18.25■□□□□ 0.51
PPARGC1B-203ENST00000394320 NOP58Q9Y2X3 529 aaKnown RBP18.25■□□□□ 0.51
PPARGC1B-203ENST00000394320 PANK3Q9H999 370 aa18.25■□□□□ 0.51
PPARGC1B-203ENST00000394320 PRDM2Q13029 1718 aa18.24■□□□□ 0.51
PPARGC1B-203ENST00000394320 NUTM2DQ5VT03 806 aaPredicted RBP18.24■□□□□ 0.51
PPARGC1B-203ENST00000394320 PRXQ9BXM0 1461 aa18.24■□□□□ 0.51
PPARGC1B-203ENST00000394320 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
PPARGC1B-203ENST00000394320 ITPRIPQ8IWB1 547 aa18.24■□□□□ 0.51
PPARGC1B-203ENST00000394320 PLEKHH2Q8IVE3 1493 aa18.23■□□□□ 0.51
PPARGC1B-203ENST00000394320 SMC4Q9NTJ3 1288 aa18.23■□□□□ 0.51
PPARGC1B-203ENST00000394320 FAM69CQ0P6D2 419 aa18.23■□□□□ 0.51
PPARGC1B-203ENST00000394320 CENPJQ9HC77 1338 aaPredicted RBP18.23■□□□□ 0.51
PPARGC1B-203ENST00000394320 COG3Q96JB2 828 aa18.22■□□□□ 0.51
PPARGC1B-203ENST00000394320 PRG4Q92954 1404 aaPredicted RBP18.21■□□□□ 0.51
PPARGC1B-203ENST00000394320 MIA2Q96PC5 1412 aa18.21■□□□□ 0.51
PPARGC1B-203ENST00000394320 KIAA1211Q6ZU35 1233 aa18.21■□□□□ 0.51
PPARGC1B-203ENST00000394320 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
PPARGC1B-203ENST00000394320 POLA1P09884 1462 aaPredicted RBP18.2■□□□□ 0.5
PPARGC1B-203ENST00000394320 PTMAP06454 111 aaKnown RBP18.2■□□□□ 0.5
PPARGC1B-203ENST00000394320 PRKRIP1Q9H875 184 aaPredicted RBP18.19■□□□□ 0.5
PPARGC1B-203ENST00000394320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.18■□□□□ 0.5
PPARGC1B-203ENST00000394320 NESP48681 1621 aa18.18■□□□□ 0.5
PPARGC1B-203ENST00000394320 EHBP1L1Q8N3D4 1523 aa18.18■□□□□ 0.5
PPARGC1B-203ENST00000394320 ARHGAP5Q13017 1502 aa18.17■□□□□ 0.5
PPARGC1B-203ENST00000394320 GLIPR1L2Q4G1C9 344 aa18.17■□□□□ 0.5
PPARGC1B-203ENST00000394320 ZNF644Q9H582 1327 aaPredicted RBP18.17■□□□□ 0.5
PPARGC1B-203ENST00000394320 ARAP1Q96P48 1450 aa18.17■□□□□ 0.5
PPARGC1B-203ENST00000394320 GPATCH3Q96I76 525 aa18.16■□□□□ 0.5
PPARGC1B-203ENST00000394320 GOLGA6L4A6NEF3 574 aa18.16■□□□□ 0.5
PPARGC1B-203ENST00000394320 RRBP1Q9P2E9 1410 aaKnown RBP18.16■□□□□ 0.5
PPARGC1B-203ENST00000394320 E9PSI1 815 aa18.14■□□□□ 0.49
PPARGC1B-203ENST00000394320 GOLGA6L6A8MZA4 724 aa18.14■□□□□ 0.49
PPARGC1B-203ENST00000394320 PTMSP20962 102 aa18.14■□□□□ 0.49
PPARGC1B-203ENST00000394320 HFM1A2PYH4 1435 aa18.14■□□□□ 0.49
PPARGC1B-203ENST00000394320 TROQ12816 1431 aaPredicted RBP18.14■□□□□ 0.49
PPARGC1B-203ENST00000394320 NAP1L2Q9ULW6 460 aaPredicted RBP18.14■□□□□ 0.49
PPARGC1B-203ENST00000394320 NRDCO43847 1150 aa18.13■□□□□ 0.49
PPARGC1B-203ENST00000394320 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
PPARGC1B-203ENST00000394320 MINK1Q8N4C8 1332 aaPredicted RBP18.12■□□□□ 0.49
PPARGC1B-203ENST00000394320 HECW1Q76N89 1606 aa18.11■□□□□ 0.49
PPARGC1B-203ENST00000394320 LAMC3Q9Y6N6 1575 aa18.11■□□□□ 0.49
PPARGC1B-203ENST00000394320 ZBED9Q6R2W3 1325 aa18.1■□□□□ 0.49
PPARGC1B-203ENST00000394320 SNAPC4Q5SXM2 1469 aa18.09■□□□□ 0.49
PPARGC1B-203ENST00000394320 TMX4Q9H1E5 349 aaPredicted RBP18.09■□□□□ 0.49
PPARGC1B-203ENST00000394320 KIAA0586Q9BVV6 1533 aa18.09■□□□□ 0.49
PPARGC1B-203ENST00000394320 CCDC9Q9Y3X0 531 aaKnown RBP18.09■□□□□ 0.49
PPARGC1B-203ENST00000394320 ABCA10Q8WWZ4 1543 aa18.08■□□□□ 0.48
PPARGC1B-203ENST00000394320 NUTM2FA1L443 756 aa18.08■□□□□ 0.48
PPARGC1B-203ENST00000394320 APBB1O00213 710 aa18.08■□□□□ 0.48
PPARGC1B-203ENST00000394320 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
PPARGC1B-203ENST00000394320 C1orf141Q5JVX7 400 aa18.07■□□□□ 0.48
PPARGC1B-203ENST00000394320 LTV1Q96GA3 475 aaPredicted RBP18.07■□□□□ 0.48
PPARGC1B-203ENST00000394320 GORABQ5T7V8 394 aa18.07■□□□□ 0.48
PPARGC1B-203ENST00000394320 DIAPH1O60610 1272 aaKnown RBP18.06■□□□□ 0.48
PPARGC1B-203ENST00000394320 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
PPARGC1B-203ENST00000394320 CCDC7Q96M83 1385 aa18.06■□□□□ 0.48
PPARGC1B-203ENST00000394320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.05■□□□□ 0.481e-7■■■■■ 39.2
PPARGC1B-203ENST00000394320 HTATSF1O43719 755 aaKnown RBP18.05■□□□□ 0.48
PPARGC1B-203ENST00000394320 GBP4Q96PP9 640 aa18.05■□□□□ 0.48
PPARGC1B-203ENST00000394320 C9orf84Q5VXU9 1444 aa18.04■□□□□ 0.48
PPARGC1B-203ENST00000394320 SLC4A10Q6U841 1118 aa18.04■□□□□ 0.48
PPARGC1B-203ENST00000394320 AFAP1Q8N556 730 aa18.04■□□□□ 0.48
PPARGC1B-203ENST00000394320 ZKSCAN2Q63HK3 967 aa18.04■□□□□ 0.48
PPARGC1B-203ENST00000394320 TEFQ10587 303 aa18.03■□□□□ 0.48
PPARGC1B-203ENST00000394320 L1TD1Q5T7N2 865 aaKnown RBP18.02■□□□□ 0.48
PPARGC1B-203ENST00000394320 CLUAP1Q96AJ1 413 aa18.02■□□□□ 0.48
PPARGC1B-203ENST00000394320 RBM19Q9Y4C8 960 aaKnown RBP18.02■□□□□ 0.47
PPARGC1B-203ENST00000394320 TIAM1Q13009 1591 aa18.01■□□□□ 0.47
PPARGC1B-203ENST00000394320 BICRAQ9NZM4 1560 aa18.01■□□□□ 0.47
PPARGC1B-203ENST00000394320 CENPQQ7L2Z9 268 aaPredicted RBP18.01■□□□□ 0.47
PPARGC1B-203ENST00000394320 DNTTIP2Q5QJE6 756 aaKnown RBP18■□□□□ 0.47
PPARGC1B-203ENST00000394320 KIF7Q2M1P5 1343 aa18■□□□□ 0.47
PPARGC1B-203ENST00000394320 KIAA1107Q9UPP5 1409 aa18■□□□□ 0.47
PPARGC1B-203ENST00000394320 CHMP3Q9Y3E7 222 aa18■□□□□ 0.47
PPARGC1B-203ENST00000394320 CNTLNQ9NXG0 1405 aa17.99■□□□□ 0.47
PPARGC1B-203ENST00000394320 WASHC2AQ641Q2 1341 aa17.99■□□□□ 0.47
PPARGC1B-203ENST00000394320 PSME1Q06323 249 aa17.99■□□□□ 0.47
PPARGC1B-203ENST00000394320 GNL2Q13823 731 aaKnown RBP17.99■□□□□ 0.47
PPARGC1B-203ENST00000394320 TPRNQ4KMQ1 711 aa17.98■□□□□ 0.47
PPARGC1B-203ENST00000394320 RRP7AQ9Y3A4 280 aaKnown RBP17.98■□□□□ 0.47
PPARGC1B-203ENST00000394320 RUNDC1Q96C34 613 aa17.98■□□□□ 0.47
PPARGC1B-203ENST00000394320 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
PPARGC1B-203ENST00000394320 API5Q9BZZ5 524 aaKnown RBP17.97■□□□□ 0.47
PPARGC1B-203ENST00000394320 CUL7Q14999 1698 aa17.97■□□□□ 0.47
PPARGC1B-203ENST00000394320 PLCB2Q00722 1185 aa17.97■□□□□ 0.47
PPARGC1B-203ENST00000394320 TRIM6-TRIM34B2RNG4 842 aa17.97■□□□□ 0.47
PPARGC1B-203ENST00000394320 APAF1O14727 1248 aa17.97■□□□□ 0.47
PPARGC1B-203ENST00000394320 EVA1CP58658 441 aa17.97■□□□□ 0.47
PPARGC1B-203ENST00000394320 SCAPERQ9BY12 1400 aa17.96■□□□□ 0.47
PPARGC1B-203ENST00000394320 AAMPQ13685 434 aa17.96■□□□□ 0.47
PPARGC1B-203ENST00000394320 SUPT6HQ7KZ85 1726 aaKnown RBP17.96■□□□□ 0.47
PPARGC1B-203ENST00000394320 ROCK1Q13464 1354 aa17.96■□□□□ 0.47
PPARGC1B-203ENST00000394320 CHMP4CQ96CF2 233 aa17.96■□□□□ 0.46
PPARGC1B-203ENST00000394320 RRP1P56182 461 aaKnown RBP17.95■□□□□ 0.46
PPARGC1B-203ENST00000394320 NEXNQ0ZGT2 675 aa17.95■□□□□ 0.46
PPARGC1B-203ENST00000394320 TTC5Q8N0Z6 440 aa17.95■□□□□ 0.46
PPARGC1B-203ENST00000394320 BRD4O60885 1362 aaPredicted RBP17.95■□□□□ 0.46
PPARGC1B-203ENST00000394320 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
PPARGC1B-203ENST00000394320 TAOK2Q9UL54 1235 aa17.94■□□□□ 0.46
PPARGC1B-203ENST00000394320 DDX19BQ9UMR2 479 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms