RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 KDM5CP41229 1560 aa20.28■□□□□ 0.84
CDH16-202ENST00000394055 RALGAPBQ86X10 1494 aa20.28■□□□□ 0.84
CDH16-202ENST00000394055 CCDC144AA2RUR9 1427 aa20.26■□□□□ 0.83
CDH16-202ENST00000394055 MRS2Q9HD23 443 aa20.26■□□□□ 0.83
CDH16-202ENST00000394055 FAM9BQ8IZU0 186 aa20.26■□□□□ 0.83
CDH16-202ENST00000394055 TRAPPC8Q9Y2L5 1435 aa20.26■□□□□ 0.83
CDH16-202ENST00000394055 UNC13BO14795 1591 aa20.25■□□□□ 0.83
CDH16-202ENST00000394055 PLXNC1O60486 1568 aa20.25■□□□□ 0.83
CDH16-202ENST00000394055 ANP32EQ9BTT0 268 aa20.24■□□□□ 0.83
CDH16-202ENST00000394055 ABCC1P33527 1531 aa20.23■□□□□ 0.83
CDH16-202ENST00000394055 PLA2R1Q13018 1463 aa20.22■□□□□ 0.83
CDH16-202ENST00000394055 NEFLP07196 543 aa20.22■□□□□ 0.83
CDH16-202ENST00000394055 DUOX2Q9NRD8 1548 aa20.22■□□□□ 0.83
CDH16-202ENST00000394055 ST20-MTHFSA0A0A6YYL1 179 aa20.22■□□□□ 0.83
CDH16-202ENST00000394055 AFAP1Q8N556 730 aa20.22■□□□□ 0.83
CDH16-202ENST00000394055 ROCK2O75116 1388 aaKnown RBP20.21■□□□□ 0.83
CDH16-202ENST00000394055 IQGAP3Q86VI3 1631 aa20.18■□□□□ 0.82
CDH16-202ENST00000394055 DHX29Q7Z478 1369 aaKnown RBP20.18■□□□□ 0.82
CDH16-202ENST00000394055 SPAG9O60271 1321 aaKnown RBP20.18■□□□□ 0.82
CDH16-202ENST00000394055 ERBINQ96RT1 1412 aa20.17■□□□□ 0.82
CDH16-202ENST00000394055 NBPF1Q3BBV0 1214 aa20.16■□□□□ 0.82
CDH16-202ENST00000394055 WDR7Q9Y4E6 1490 aa20.15■□□□□ 0.82
CDH16-202ENST00000394055 PRAG1Q86YV5 1406 aa20.15■□□□□ 0.82
CDH16-202ENST00000394055 A2MP01023 1474 aa20.14■□□□□ 0.82
CDH16-202ENST00000394055 MYT1LQ9UL68 1186 aa20.13■□□□□ 0.81
CDH16-202ENST00000394055 MAGI2Q86UL8 1455 aa20.13■□□□□ 0.81
CDH16-202ENST00000394055 ARID4BQ4LE39 1312 aaPredicted RBP20.13■□□□□ 0.81
CDH16-202ENST00000394055 FANCAO15360 1455 aa20.1■□□□□ 0.81
CDH16-202ENST00000394055 TRPM1Q7Z4N2 1603 aa20.1■□□□□ 0.81
CDH16-202ENST00000394055 ZFYVE16Q7Z3T8 1539 aa20.09■□□□□ 0.81
CDH16-202ENST00000394055 IRX6P78412 446 aaPredicted RBP20.09■□□□□ 0.81
CDH16-202ENST00000394055 ARAP3Q8WWN8 1544 aa20.07■□□□□ 0.8
CDH16-202ENST00000394055 ASXL2Q76L83 1435 aa20.06■□□□□ 0.8
CDH16-202ENST00000394055 SENP3-EIF4A1A0A087X0R7 540 aa20.05■□□□□ 0.8
CDH16-202ENST00000394055 RTEL1-TNFRSF6BF6WH68 1400 aa20.05■□□□□ 0.8
CDH16-202ENST00000394055 SCAPERQ9BY12 1400 aa20.04■□□□□ 0.8
CDH16-202ENST00000394055 ATP10AO60312 1499 aa20.04■□□□□ 0.8
CDH16-202ENST00000394055 ADGRL1O94910 1474 aa20.04■□□□□ 0.8
CDH16-202ENST00000394055 ABCA9Q8IUA7 1624 aa20.03■□□□□ 0.8
CDH16-202ENST00000394055 ATP7AQ04656 1500 aa20.03■□□□□ 0.8
CDH16-202ENST00000394055 ZBED9Q6R2W3 1325 aa20.03■□□□□ 0.8
CDH16-202ENST00000394055 ERICH6Q7L0X2 663 aa20.03■□□□□ 0.8
CDH16-202ENST00000394055 E9PCH4 1651 aa20.02■□□□□ 0.8
CDH16-202ENST00000394055 KIF3BO15066 747 aa20.02■□□□□ 0.8
CDH16-202ENST00000394055 TSHZ2Q9NRE2 1034 aa20.02■□□□□ 0.8
CDH16-202ENST00000394055 GPRASP1Q5JY77 1395 aa20■□□□□ 0.79
CDH16-202ENST00000394055 OSCARQ8IYS5 282 aa20■□□□□ 0.79
CDH16-202ENST00000394055 TMC1Q8TDI8 760 aa19.99■□□□□ 0.79
CDH16-202ENST00000394055 INO80Q9ULG1 1556 aaPredicted RBP19.99■□□□□ 0.79
CDH16-202ENST00000394055 NPM1P06748 294 aaKnown RBP eCLIP19.98■□□□□ 0.79
CDH16-202ENST00000394055 DISP3Q9P2K9 1392 aa19.97■□□□□ 0.79
CDH16-202ENST00000394055 PRDM15P57071 1507 aaPredicted RBP19.97■□□□□ 0.79
CDH16-202ENST00000394055 TESK2Q96S53 571 aa19.96■□□□□ 0.79
CDH16-202ENST00000394055 EIF2AK4Q9P2K8 1649 aaKnown RBP19.96■□□□□ 0.79
CDH16-202ENST00000394055 KANK1Q14678 1352 aa19.95■□□□□ 0.78
CDH16-202ENST00000394055 DEPDC5O75140 1603 aa19.94■□□□□ 0.78
CDH16-202ENST00000394055 PNISRQ8TF01 805 aaKnown RBP19.94■□□□□ 0.78
CDH16-202ENST00000394055 TRPM2O94759 1503 aa19.94■□□□□ 0.78
CDH16-202ENST00000394055 SPHKAPQ2M3C7 1700 aa19.93■□□□□ 0.78
CDH16-202ENST00000394055 COL17A1Q9UMD9 1497 aaPredicted RBP19.93■□□□□ 0.78
CDH16-202ENST00000394055 CLTCL1P53675 1640 aa19.93■□□□□ 0.78
CDH16-202ENST00000394055 MYBBP1AQ9BQG0 1328 aaKnown RBP19.92■□□□□ 0.78
CDH16-202ENST00000394055 LAMC1P11047 1609 aa19.92■□□□□ 0.78
CDH16-202ENST00000394055 TET3O43151 1660 aa19.91■□□□□ 0.78
CDH16-202ENST00000394055 PTPRTO14522 1441 aa19.91■□□□□ 0.78
CDH16-202ENST00000394055 RALBP1Q15311 655 aa19.9■□□□□ 0.78
CDH16-202ENST00000394055 TMF1P82094 1093 aa19.89■□□□□ 0.78
CDH16-202ENST00000394055 MADDQ8WXG6 1647 aa19.89■□□□□ 0.77
CDH16-202ENST00000394055 CC2D1BQ5T0F9 858 aaKnown RBP19.88■□□□□ 0.77
CDH16-202ENST00000394055 KTN1Q86UP2 1357 aaKnown RBP19.88■□□□□ 0.77
CDH16-202ENST00000394055 CEP152O94986 1710 aa19.88■□□□□ 0.77
CDH16-202ENST00000394055 RNF17Q9BXT8 1623 aaKnown RBP19.88■□□□□ 0.77
CDH16-202ENST00000394055 PER1O15534 1290 aaPredicted RBP19.88■□□□□ 0.77
CDH16-202ENST00000394055 PANK3Q9H999 370 aa19.88■□□□□ 0.77
CDH16-202ENST00000394055 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
CDH16-202ENST00000394055 VWDEQ8N2E2 1590 aa19.87■□□□□ 0.77
CDH16-202ENST00000394055 KIDINS220Q9ULH0 1771 aa19.87■□□□□ 0.77
CDH16-202ENST00000394055 BRD4O60885 1362 aaPredicted RBP19.87■□□□□ 0.77
CDH16-202ENST00000394055 MROH1Q8NDA8 1641 aa19.87■□□□□ 0.77
CDH16-202ENST00000394055 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
CDH16-202ENST00000394055 ZNF518AQ6AHZ1 1483 aa19.85■□□□□ 0.77
CDH16-202ENST00000394055 PARD3Q8TEW0 1356 aa19.84■□□□□ 0.77
CDH16-202ENST00000394055 NLRP13Q86W25 1043 aa19.82■□□□□ 0.76
CDH16-202ENST00000394055 LRPPRCP42704 1394 aaKnown RBP19.81■□□□□ 0.76
CDH16-202ENST00000394055 GGT6Q6P531 493 aa19.81■□□□□ 0.76
CDH16-202ENST00000394055 SMG6Q86US8 1419 aaKnown RBP19.81■□□□□ 0.76
CDH16-202ENST00000394055 NUDCQ9Y266 331 aa19.8■□□□□ 0.76
CDH16-202ENST00000394055 SALL2Q9Y467 1007 aaPredicted RBP19.8■□□□□ 0.76
CDH16-202ENST00000394055 IQGAP1P46940 1657 aa19.79■□□□□ 0.76
CDH16-202ENST00000394055 POGZQ7Z3K3 1410 aa19.79■□□□□ 0.76
CDH16-202ENST00000394055 CHGAP10645 457 aaKnown RBP19.79■□□□□ 0.76
CDH16-202ENST00000394055 EFCAB6Q5THR3 1501 aa19.78■□□□□ 0.76
CDH16-202ENST00000394055 SCAF11Q99590 1463 aaKnown RBP19.78■□□□□ 0.76
CDH16-202ENST00000394055 CFAP70Q5T0N1 1121 aa19.78■□□□□ 0.76
CDH16-202ENST00000394055 PPRC1Q5VV67 1664 aaKnown RBP19.78■□□□□ 0.76
CDH16-202ENST00000394055 ADGRF5Q8IZF2 1346 aa19.77■□□□□ 0.76
CDH16-202ENST00000394055 PPP4R2Q9NY27 417 aa19.77■□□□□ 0.76
CDH16-202ENST00000394055 RAPGEF3O95398 923 aa19.76■□□□□ 0.75
CDH16-202ENST00000394055 STAC3Q96MF2 364 aa19.75■□□□□ 0.75
CDH16-202ENST00000394055 B4GALNT3Q6L9W6 998 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms