RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 CDR1P51861 262 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 PHF14O94880 888 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 FOSBP53539 338 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.04□□□□□ -1.761e-6■■■□□ 15.5
PHF3-202ENST00000393387 STAG3Q9UJ98 1225 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 CHIC2Q9UKJ5 165 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 HMGB3O15347 200 aaKnown RBP4.04□□□□□ -1.76
PHF3-202ENST00000393387 ANKRD62A6NC57 917 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 GOLGA2Q08379 1002 aa4.04□□□□□ -1.76
PHF3-202ENST00000393387 ARGLU1Q9NWB6 273 aaPredicted RBP4.04□□□□□ -1.76
PHF3-202ENST00000393387 GOLGA6L19H0YKK7 550 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 TPM2P07951 284 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 ARID4AP29374 1257 aaPredicted RBP4.03□□□□□ -1.76
PHF3-202ENST00000393387 CSPP1Q1MSJ5 1256 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 VPS53Q5VIR6 699 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 FYB1O15117 783 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 SSR1P43307 286 aaKnown RBP4.03□□□□□ -1.76
PHF3-202ENST00000393387 KIAA0754O94854 1291 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 HMGB2P26583 209 aaKnown RBP4.03□□□□□ -1.76
PHF3-202ENST00000393387 NF2P35240 595 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 CAGE1Q8TC20 777 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 DNAJC2Q99543 621 aaKnown RBP4.03□□□□□ -1.76
PHF3-202ENST00000393387 GTF2A1P52655 376 aaPredicted RBP4.03□□□□□ -1.76
PHF3-202ENST00000393387 FLIIQ13045 1269 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 DDX11L8A8MPP1 907 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 DCTN1Q14203 1278 aa4.03□□□□□ -1.76
PHF3-202ENST00000393387 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.03□□□□□ -1.764e-6■■■■■ 40.2
PHF3-202ENST00000393387 TMCO4Q5TGY1 634 aa4.02□□□□□ -1.77
PHF3-202ENST00000393387 KIF3AQ9Y496 699 aa4.02□□□□□ -1.77
PHF3-202ENST00000393387 BECN2A8MW95 431 aa4.02□□□□□ -1.77
PHF3-202ENST00000393387 KCNA4P22459 653 aa4.02□□□□□ -1.77
PHF3-202ENST00000393387 ENOX2Q16206 610 aaKnown RBP4.02□□□□□ -1.77
PHF3-202ENST00000393387 RNF214Q8ND24 703 aa4.02□□□□□ -1.77
PHF3-202ENST00000393387 TMX4Q9H1E5 349 aaPredicted RBP4.02□□□□□ -1.77
PHF3-202ENST00000393387 TOMM22Q9NS69 142 aa4.02□□□□□ -1.77
PHF3-202ENST00000393387 TRIM6-TRIM34B2RNG4 842 aa4.02□□□□□ -1.77
PHF3-202ENST00000393387 PDILTQ8N807 584 aa4.02□□□□□ -1.77
PHF3-202ENST00000393387 PUS7Q96PZ0 661 aaKnown RBP4.02□□□□□ -1.77
PHF3-202ENST00000393387 ACBD3Q9H3P7 528 aa4.02□□□□□ -1.77
PHF3-202ENST00000393387 TSR1Q2NL82 804 aaKnown RBP4.01□□□□□ -1.77
PHF3-202ENST00000393387 ZBTB9Q96C00 473 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 SERPINA10Q9UK55 444 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 RALBP1Q15311 655 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 CT47A1Q5JQC4 288 aaPredicted RBP4.01□□□□□ -1.77
PHF3-202ENST00000393387 CCDC9Q9Y3X0 531 aaKnown RBP4.01□□□□□ -1.77
PHF3-202ENST00000393387 SPDYE4A6NLX3 237 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 TAX1BP1Q86VP1 789 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 SPC24Q8NBT2 197 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 KDM4AO75164 1064 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 CT47B1P0C2W7 299 aaPredicted RBP4.01□□□□□ -1.77
PHF3-202ENST00000393387 NEXNQ0ZGT2 675 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 KIAA1211Q6ZU35 1233 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 BAZ1BQ9UIG0 1483 aaKnown RBP4.01□□□□□ -1.77
PHF3-202ENST00000393387 SF3A1Q15459 793 aaKnown RBP4.01□□□□□ -1.77
PHF3-202ENST00000393387 MCTP1Q6DN14 999 aa4.01□□□□□ -1.77
PHF3-202ENST00000393387 ZRSR2Q15696 482 aaKnown RBP4□□□□□ -1.77
PHF3-202ENST00000393387 HSP90AB2PQ58FF8 381 aa4□□□□□ -1.77
PHF3-202ENST00000393387 ITPRIPQ8IWB1 547 aa4□□□□□ -1.77
PHF3-202ENST00000393387 TRIM34Q9BYJ4 488 aa4□□□□□ -1.77
PHF3-202ENST00000393387 KIF16BQ96L93 1317 aa4□□□□□ -1.77
PHF3-202ENST00000393387 PAF1Q8N7H5 531 aa4□□□□□ -1.77
PHF3-202ENST00000393387 INCENPQ9NQS7 918 aa4□□□□□ -1.77
PHF3-202ENST00000393387 GOLGA6L10A0A0M3HER8 536 aa4□□□□□ -1.77
PHF3-202ENST00000393387 GOLGA6L10A6NI86 522 aa4□□□□□ -1.77
PHF3-202ENST00000393387 RRP9O43818 475 aaKnown RBP4□□□□□ -1.77
PHF3-202ENST00000393387 SUDS3Q9H7L9 328 aaPredicted RBP4□□□□□ -1.77
PHF3-202ENST00000393387 DMRT2Q9Y5R5 561 aa4□□□□□ -1.77
PHF3-202ENST00000393387 NPM3O75607 178 aaKnown RBP4□□□□□ -1.77
PHF3-202ENST00000393387 ZBTB22O15209 634 aa4□□□□□ -1.77
PHF3-202ENST00000393387 GTF2F1P35269 517 aaKnown RBP eCLIP4□□□□□ -1.772e-6■■■□□ 17.2
PHF3-202ENST00000393387 SRPK2P78362 688 aaKnown RBP4□□□□□ -1.77
PHF3-202ENST00000393387 CERS3Q8IU89 383 aa4□□□□□ -1.77
PHF3-202ENST00000393387 HDAC5Q9UQL6 1122 aa4□□□□□ -1.77
PHF3-202ENST00000393387 MAPK8IP3Q9UPT6 1336 aa4□□□□□ -1.77
PHF3-202ENST00000393387 H3BQV1 296 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 IFFO2Q5TF58 517 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 PPP4R3CPQ6ZMV5 832 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 FAM177A1Q8N128 213 aaPredicted RBP3.99□□□□□ -1.77
PHF3-202ENST00000393387 POLR3GO15318 223 aaPredicted RBP3.99□□□□□ -1.77
PHF3-202ENST00000393387 RNF216Q9NWF9 866 aaPredicted RBP3.99□□□□□ -1.77
PHF3-202ENST00000393387 CCDC39Q9UFE4 941 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 TPM1P09493 284 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 TDO2P48775 406 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 RNF187Q5TA31 235 aaPredicted RBP3.99□□□□□ -1.77
PHF3-202ENST00000393387 KRI1Q8N9T8 703 aaKnown RBP3.99□□□□□ -1.77
PHF3-202ENST00000393387 PIK3R5Q8WYR1 880 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 CCDC102AQ96A19 550 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 PROM2Q8N271 834 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.99□□□□□ -1.77
PHF3-202ENST00000393387 CFAP53Q96M91 514 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 CEP63Q96MT8 703 aa3.99□□□□□ -1.77
PHF3-202ENST00000393387 TCERG1O14776 1098 aaKnown RBP3.98□□□□□ -1.77
PHF3-202ENST00000393387 MARCH6O60337 910 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 ATP2C2O75185 946 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 NASPP49321 788 aaPredicted RBP3.98□□□□□ -1.77
PHF3-202ENST00000393387 ZFYVE27Q5T4F4 411 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 TMX1Q9H3N1 280 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 USP8P40818 1118 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 POLD1P28340 1107 aa3.98□□□□□ -1.77
PHF3-202ENST00000393387 NFKBIBQ15653 356 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms