RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 LMOD2Q6P5Q4 547 aa10.67□□□□□ -0.7
ATXN3-203ENST00000393287 HNRNPUQ00839 825 aaKnown RBP eCLIP10.67□□□□□ -0.7
ATXN3-203ENST00000393287 MS4A1P11836 297 aa10.67□□□□□ -0.7
ATXN3-203ENST00000393287 GPATCH8Q9UKJ3 1502 aaKnown RBP10.67□□□□□ -0.7
ATXN3-203ENST00000393287 HFM1A2PYH4 1435 aa10.67□□□□□ -0.7
ATXN3-203ENST00000393287 KTN1Q86UP2 1357 aaKnown RBP10.66□□□□□ -0.7
ATXN3-203ENST00000393287 ZNF518AQ6AHZ1 1483 aa10.66□□□□□ -0.7
ATXN3-203ENST00000393287 ANKLE2Q86XL3 938 aa10.66□□□□□ -0.7
ATXN3-203ENST00000393287 TXNDC2Q86VQ3 553 aa10.65□□□□□ -0.7
ATXN3-203ENST00000393287 KDM5BQ9UGL1 1544 aa10.65□□□□□ -0.7
ATXN3-203ENST00000393287 NUTM2DQ5VT03 806 aaPredicted RBP10.65□□□□□ -0.7
ATXN3-203ENST00000393287 CALD1Q05682 793 aaKnown RBP10.65□□□□□ -0.7
ATXN3-203ENST00000393287 L3MBTL2Q969R5 705 aa10.65□□□□□ -0.7
ATXN3-203ENST00000393287 CAMSAP2Q08AD1 1489 aa10.65□□□□□ -0.71
ATXN3-203ENST00000393287 RALBP1Q15311 655 aa10.64□□□□□ -0.71
ATXN3-203ENST00000393287 ABCC10Q5T3U5 1492 aa10.64□□□□□ -0.71
ATXN3-203ENST00000393287 SAFB2Q14151 953 aaKnown RBP eCLIP10.63□□□□□ -0.71
ATXN3-203ENST00000393287 MORC1Q86VD1 984 aa10.63□□□□□ -0.71
ATXN3-203ENST00000393287 NEO1Q92859 1461 aa10.63□□□□□ -0.71
ATXN3-203ENST00000393287 DMRT2Q9Y5R5 561 aa10.63□□□□□ -0.71
ATXN3-203ENST00000393287 ABCC5O15440 1437 aa10.62□□□□□ -0.71
ATXN3-203ENST00000393287 RPGRIP1LQ68CZ1 1315 aa10.61□□□□□ -0.71
ATXN3-203ENST00000393287 EVC2Q86UK5 1308 aa10.61□□□□□ -0.71
ATXN3-203ENST00000393287 ITSN2Q9NZM3 1697 aa10.61□□□□□ -0.71
ATXN3-203ENST00000393287 DHX57Q6P158 1386 aaKnown RBP10.61□□□□□ -0.71
ATXN3-203ENST00000393287 UPF2Q9HAU5 1272 aaKnown RBP10.6□□□□□ -0.71
ATXN3-203ENST00000393287 HSPA5P11021 654 aaKnown RBP10.6□□□□□ -0.71
ATXN3-203ENST00000393287 NCOA1Q15788 1441 aa10.59□□□□□ -0.71
ATXN3-203ENST00000393287 CCER2I3L3R5 266 aa10.59□□□□□ -0.71
ATXN3-203ENST00000393287 PLEKHG5O94827 1062 aa10.59□□□□□ -0.71
ATXN3-203ENST00000393287 RTEL1-TNFRSF6BF6WH68 1400 aa10.58□□□□□ -0.72
ATXN3-203ENST00000393287 PPM1GO15355 546 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-203ENST00000393287 SAMD9Q5K651 1589 aa10.57□□□□□ -0.72
ATXN3-203ENST00000393287 A0A0G2JS52 829 aa10.57□□□□□ -0.72
ATXN3-203ENST00000393287 TRAK1Q9UPV9 953 aa10.57□□□□□ -0.72
ATXN3-203ENST00000393287 PROSER2Q86WR7 435 aaPredicted RBP10.56□□□□□ -0.72
ATXN3-203ENST00000393287 NGDNQ8NEJ9 315 aaKnown RBP10.56□□□□□ -0.72
ATXN3-203ENST00000393287 TRAPPC8Q9Y2L5 1435 aa10.56□□□□□ -0.72
ATXN3-203ENST00000393287 A2MP01023 1474 aa10.56□□□□□ -0.72
ATXN3-203ENST00000393287 CEBPAP49715 358 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-203ENST00000393287 RTF1Q92541 710 aaKnown RBP10.55□□□□□ -0.72
ATXN3-203ENST00000393287 CLASP1Q7Z460 1538 aa10.55□□□□□ -0.72
ATXN3-203ENST00000393287 PTPN23Q9H3S7 1636 aa10.55□□□□□ -0.72
ATXN3-203ENST00000393287 ANKRD30BQ9BXX2 1392 aa10.55□□□□□ -0.72
ATXN3-203ENST00000393287 ATF3P18847 181 aa10.55□□□□□ -0.72
ATXN3-203ENST00000393287 HIRIP3Q9BW71 556 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-203ENST00000393287 CHD1O14646 1710 aa10.55□□□□□ -0.72
ATXN3-203ENST00000393287 LMOD3Q0VAK6 560 aa10.55□□□□□ -0.72
ATXN3-203ENST00000393287 ABCA8O94911 1581 aa10.55□□□□□ -0.72
ATXN3-203ENST00000393287 CNTLNQ9NXG0 1405 aa10.54□□□□□ -0.72
ATXN3-203ENST00000393287 CGNL1Q0VF96 1302 aa10.54□□□□□ -0.72
ATXN3-203ENST00000393287 NAIPQ13075 1403 aa10.54□□□□□ -0.72
ATXN3-203ENST00000393287 RTL5Q5HYW3 569 aaPredicted RBP10.54□□□□□ -0.72
ATXN3-203ENST00000393287 TNRQ92752 1358 aa10.53□□□□□ -0.72
ATXN3-203ENST00000393287 ATP10AO60312 1499 aa10.53□□□□□ -0.72
ATXN3-203ENST00000393287 CC2D1BQ5T0F9 858 aaKnown RBP10.53□□□□□ -0.72
ATXN3-203ENST00000393287 CFAP74Q9C0B2 1584 aa10.53□□□□□ -0.72
ATXN3-203ENST00000393287 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
ATXN3-203ENST00000393287 CSB-PGBD3P0DP91 1061 aa10.52□□□□□ -0.73
ATXN3-203ENST00000393287 U2SURPO15042 1029 aaKnown RBP10.52□□□□□ -0.73
ATXN3-203ENST00000393287 FBXO31Q5XUX0 539 aaPredicted RBP10.51□□□□□ -0.73
ATXN3-203ENST00000393287 ERBINQ96RT1 1412 aa10.51□□□□□ -0.73
ATXN3-203ENST00000393287 HDAC5Q9UQL6 1122 aa10.5□□□□□ -0.73
ATXN3-203ENST00000393287 CENPJQ9HC77 1338 aaPredicted RBP10.5□□□□□ -0.73
ATXN3-203ENST00000393287 ANP32AP39687 249 aaKnown RBP10.5□□□□□ -0.73
ATXN3-203ENST00000393287 SYCP2Q9BX26 1530 aa10.5□□□□□ -0.73
ATXN3-203ENST00000393287 IDI1Q13907 227 aa10.5□□□□□ -0.73
ATXN3-203ENST00000393287 CFAP44Q96MT7 982 aa10.49□□□□□ -0.73
ATXN3-203ENST00000393287 MAGI2Q86UL8 1455 aa10.49□□□□□ -0.73
ATXN3-203ENST00000393287 FTSJ3Q8IY81 847 aaKnown RBP10.49□□□□□ -0.73
ATXN3-203ENST00000393287 CASC1Q6TDU7 716 aa10.49□□□□□ -0.73
ATXN3-203ENST00000393287 ERCC6L2Q5T890 1561 aa10.48□□□□□ -0.73
ATXN3-203ENST00000393287 MINK1Q8N4C8 1332 aaPredicted RBP10.48□□□□□ -0.73
ATXN3-203ENST00000393287 SHANK2Q9UPX8 1470 aa10.48□□□□□ -0.73
ATXN3-203ENST00000393287 COG3Q96JB2 828 aa10.48□□□□□ -0.73
ATXN3-203ENST00000393287 SLC26A8Q96RN1 970 aa10.48□□□□□ -0.73
ATXN3-203ENST00000393287 DUOX2Q9NRD8 1548 aa10.48□□□□□ -0.73
ATXN3-203ENST00000393287 PSME1Q06323 249 aa10.48□□□□□ -0.73
ATXN3-203ENST00000393287 NUTM2FA1L443 756 aa10.47□□□□□ -0.73
ATXN3-203ENST00000393287 NGEFQ8N5V2 710 aa10.47□□□□□ -0.73
ATXN3-203ENST00000393287 TCOF1Q13428 1488 aaKnown RBP10.47□□□□□ -0.73
ATXN3-203ENST00000393287 CFAP70Q5T0N1 1121 aa10.47□□□□□ -0.73
ATXN3-203ENST00000393287 USP47Q96K76 1375 aa10.47□□□□□ -0.73
ATXN3-203ENST00000393287 HMGB2P26583 209 aaKnown RBP10.47□□□□□ -0.73
ATXN3-203ENST00000393287 CCDC136Q96JN2 1154 aa10.47□□□□□ -0.73
ATXN3-203ENST00000393287 MAPKBP1O60336 1514 aa10.47□□□□□ -0.73
ATXN3-203ENST00000393287 MAGI3Q5TCQ9 1506 aa10.47□□□□□ -0.73
ATXN3-203ENST00000393287 SALL2Q9Y467 1007 aaPredicted RBP10.46□□□□□ -0.73
ATXN3-203ENST00000393287 CFAP43Q8NDM7 1665 aa10.46□□□□□ -0.74
ATXN3-203ENST00000393287 ST20-MTHFSA0A0A6YYL1 179 aa10.46□□□□□ -0.74
ATXN3-203ENST00000393287 NPHP1O15259 732 aa10.45□□□□□ -0.74
ATXN3-203ENST00000393287 AMPHP49418 695 aa10.45□□□□□ -0.74
ATXN3-203ENST00000393287 IPO8O15397 1037 aaKnown RBP10.45□□□□□ -0.74
ATXN3-203ENST00000393287 ZMYM3Q14202 1370 aa10.45□□□□□ -0.74
ATXN3-203ENST00000393287 GPRASP1Q5JY77 1395 aa10.45□□□□□ -0.74
ATXN3-203ENST00000393287 SOX12O15370 315 aa10.44□□□□□ -0.74
ATXN3-203ENST00000393287 FAM135AQ9P2D6 1515 aa10.44□□□□□ -0.74
ATXN3-203ENST00000393287 TMEM132EQ6IEE7 984 aa10.44□□□□□ -0.74
ATXN3-203ENST00000393287 GTF3C3Q9Y5Q9 886 aa10.44□□□□□ -0.74
ATXN3-203ENST00000393287 TNNT2P45379 298 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms