RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 TNIKQ9UKE5 1360 aa16.67■□□□□ 0.26
GSE1-202ENST00000393243 KIF16BQ96L93 1317 aa16.67■□□□□ 0.26
GSE1-202ENST00000393243 CEP89Q96ST8 783 aa16.66■□□□□ 0.26
GSE1-202ENST00000393243 TPM3P06753 285 aa16.66■□□□□ 0.26
GSE1-202ENST00000393243 H3BQV1 296 aa16.66■□□□□ 0.26
GSE1-202ENST00000393243 IFFO2Q5TF58 517 aa16.66■□□□□ 0.26
GSE1-202ENST00000393243 FBXW7Q969H0 707 aa16.66■□□□□ 0.26
GSE1-202ENST00000393243 EEA1Q15075 1411 aa16.65■□□□□ 0.26
GSE1-202ENST00000393243 HSP90AA2PQ14568 343 aaPredicted RBP16.64■□□□□ 0.25
GSE1-202ENST00000393243 SETD5Q9C0A6 1442 aa16.64■□□□□ 0.25
GSE1-202ENST00000393243 KANK4Q5T7N3 995 aaPredicted RBP16.64■□□□□ 0.25
GSE1-202ENST00000393243 CENPJQ9HC77 1338 aaPredicted RBP16.63■□□□□ 0.25
GSE1-202ENST00000393243 ANKRD45Q5TZF3 282 aa16.63■□□□□ 0.25
GSE1-202ENST00000393243 MCTP1Q6DN14 999 aa16.63■□□□□ 0.25
GSE1-202ENST00000393243 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
GSE1-202ENST00000393243 GTF2E1P29083 439 aaPredicted RBP16.63■□□□□ 0.25
GSE1-202ENST00000393243 AMPHP49418 695 aa16.62■□□□□ 0.25
GSE1-202ENST00000393243 CSPP1Q1MSJ5 1256 aa16.62■□□□□ 0.25
GSE1-202ENST00000393243 TIMELESSQ9UNS1 1208 aa16.62■□□□□ 0.25
GSE1-202ENST00000393243 HMMRO75330 724 aa16.62■□□□□ 0.25
GSE1-202ENST00000393243 ST18O60284 1047 aa16.62■□□□□ 0.25
GSE1-202ENST00000393243 FOSBP53539 338 aa16.62■□□□□ 0.25
GSE1-202ENST00000393243 MPHOSPH9Q99550 1183 aa16.61■□□□□ 0.25
GSE1-202ENST00000393243 NGDNQ8NEJ9 315 aaKnown RBP16.61■□□□□ 0.25
GSE1-202ENST00000393243 DDX49Q9Y6V7 483 aaKnown RBP16.6■□□□□ 0.25
GSE1-202ENST00000393243 VSIG10Q8N0Z9 540 aa16.6■□□□□ 0.25
GSE1-202ENST00000393243 RALBP1Q15311 655 aa16.6■□□□□ 0.25
GSE1-202ENST00000393243 FAM184AQ8NB25 1140 aa16.6■□□□□ 0.25
GSE1-202ENST00000393243 CCDC34Q96HJ3 373 aa16.6■□□□□ 0.25
GSE1-202ENST00000393243 PHF14O94880 888 aa16.58■□□□□ 0.24
GSE1-202ENST00000393243 NUP155O75694 1391 aa16.58■□□□□ 0.24
GSE1-202ENST00000393243 GOLGA6L19H0YKK7 550 aa16.58■□□□□ 0.24
GSE1-202ENST00000393243 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
GSE1-202ENST00000393243 PCMTD1Q96MG8 357 aaPredicted RBP16.57■□□□□ 0.24
GSE1-202ENST00000393243 ARHGAP35Q9NRY4 1499 aa16.56■□□□□ 0.24
GSE1-202ENST00000393243 ZNF771Q7L3S4 317 aaPredicted RBP16.56■□□□□ 0.24
GSE1-202ENST00000393243 BECN2A8MW95 431 aa16.55■□□□□ 0.24
GSE1-202ENST00000393243 HNRNPMP52272 730 aaKnown RBP eCLIP16.55■□□□□ 0.242e-6■■■□□ 16.3
GSE1-202ENST00000393243 MSH5O43196 834 aa16.54■□□□□ 0.24
GSE1-202ENST00000393243 RAB3GAP2Q9H2M9 1393 aa16.54■□□□□ 0.24
GSE1-202ENST00000393243 TSR1Q2NL82 804 aaKnown RBP16.54■□□□□ 0.24
GSE1-202ENST00000393243 CRBNQ96SW2 442 aa16.54■□□□□ 0.24
GSE1-202ENST00000393243 SOGA1O94964 1423 aa16.54■□□□□ 0.24
GSE1-202ENST00000393243 EXOC6Q8TAG9 804 aa16.54■□□□□ 0.24
GSE1-202ENST00000393243 EIF2S2P20042 333 aaKnown RBP16.54■□□□□ 0.24
GSE1-202ENST00000393243 KDM4AO75164 1064 aa16.53■□□□□ 0.24
GSE1-202ENST00000393243 SAMD1Q6SPF0 538 aaPredicted RBP16.53■□□□□ 0.24
GSE1-202ENST00000393243 KIF3BO15066 747 aa16.53■□□□□ 0.24
GSE1-202ENST00000393243 SETQ01105 290 aaPredicted RBP16.52■□□□□ 0.24
GSE1-202ENST00000393243 AKAP17AQ02040 695 aaKnown RBP16.52■□□□□ 0.23
GSE1-202ENST00000393243 COG6Q9Y2V7 657 aa16.52■□□□□ 0.23
GSE1-202ENST00000393243 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
GSE1-202ENST00000393243 PDE4AP27815 886 aa16.51■□□□□ 0.23
GSE1-202ENST00000393243 FHAD1B1AJZ9 1412 aa16.51■□□□□ 0.23
GSE1-202ENST00000393243 TERF2IPQ9NYB0 399 aa16.5■□□□□ 0.23
GSE1-202ENST00000393243 FAM13BQ9NYF5 915 aa16.5■□□□□ 0.23
GSE1-202ENST00000393243 L3MBTL2Q969R5 705 aa16.5■□□□□ 0.23
GSE1-202ENST00000393243 CARMIL1Q5VZK9 1371 aa16.5■□□□□ 0.23
GSE1-202ENST00000393243 CUX2O14529 1486 aa16.5■□□□□ 0.23
GSE1-202ENST00000393243 APPP05067 770 aa16.5■□□□□ 0.23
GSE1-202ENST00000393243 GSE1Q14687 1217 aa16.48■□□□□ 0.23
GSE1-202ENST00000393243 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
GSE1-202ENST00000393243 PANK3Q9H999 370 aa16.48■□□□□ 0.23
GSE1-202ENST00000393243 DHX16O60231 1041 aaKnown RBP16.46■□□□□ 0.23
GSE1-202ENST00000393243 TCEAL9Q9UHQ7 104 aa16.46■□□□□ 0.23
GSE1-202ENST00000393243 FAM161AQ3B820 660 aa16.46■□□□□ 0.23
GSE1-202ENST00000393243 HOMER1Q86YM7 354 aa16.46■□□□□ 0.23
GSE1-202ENST00000393243 DIAPH3Q9NSV4 1193 aa16.46■□□□□ 0.22
GSE1-202ENST00000393243 TPM2P07951 284 aa16.45■□□□□ 0.22
GSE1-202ENST00000393243 SYTL4Q96C24 671 aaPredicted RBP16.45■□□□□ 0.22
GSE1-202ENST00000393243 KIF3AQ9Y496 699 aa16.45■□□□□ 0.22
GSE1-202ENST00000393243 EIF3AQ14152 1382 aaKnown RBP16.45■□□□□ 0.22
GSE1-202ENST00000393243 TPM1P09493 284 aa16.44■□□□□ 0.22
GSE1-202ENST00000393243 EVA1CP58658 441 aa16.44■□□□□ 0.22
GSE1-202ENST00000393243 SYNE3Q6ZMZ3 975 aa16.44■□□□□ 0.22
GSE1-202ENST00000393243 BICD2Q8TD16 824 aa16.44■□□□□ 0.22
GSE1-202ENST00000393243 NLRP13Q86W25 1043 aa16.43■□□□□ 0.22
GSE1-202ENST00000393243 MTMR7Q9Y216 660 aa16.43■□□□□ 0.22
GSE1-202ENST00000393243 C1orf141Q5JVX7 400 aa16.43■□□□□ 0.22
GSE1-202ENST00000393243 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
GSE1-202ENST00000393243 CENPQQ7L2Z9 268 aaPredicted RBP16.42■□□□□ 0.22
GSE1-202ENST00000393243 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
GSE1-202ENST00000393243 NAP1L1P55209 391 aaKnown RBP16.42■□□□□ 0.22
GSE1-202ENST00000393243 ST20-MTHFSA0A0A6YYL1 179 aa16.41■□□□□ 0.22
GSE1-202ENST00000393243 VPS37CA5D8V6 355 aaPredicted RBP16.41■□□□□ 0.22
GSE1-202ENST00000393243 FYB1O15117 783 aa16.41■□□□□ 0.22
GSE1-202ENST00000393243 SKIDA1Q1XH10 827 aa16.41■□□□□ 0.22
GSE1-202ENST00000393243 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
GSE1-202ENST00000393243 WASHC2CQ9Y4E1 1318 aa16.41■□□□□ 0.22
GSE1-202ENST00000393243 TRIM29Q14134 588 aa16.41■□□□□ 0.22
GSE1-202ENST00000393243 RSPH6AQ9H0K4 717 aa16.41■□□□□ 0.22
GSE1-202ENST00000393243 HDAC5Q9UQL6 1122 aa16.41■□□□□ 0.22
GSE1-202ENST00000393243 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
GSE1-202ENST00000393243 CCDC70Q6NSX1 233 aa16.4■□□□□ 0.22
GSE1-202ENST00000393243 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
GSE1-202ENST00000393243 ABCC8Q09428 1581 aa16.4■□□□□ 0.22
GSE1-202ENST00000393243 TTLL5Q6EMB2 1281 aa16.4■□□□□ 0.22
GSE1-202ENST00000393243 NFXL1Q6ZNB6 911 aa16.4■□□□□ 0.22
GSE1-202ENST00000393243 CTDP1Q9Y5B0 961 aaPredicted RBP16.4■□□□□ 0.22
GSE1-202ENST00000393243 RRP1P56182 461 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms