RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 NUTM2DQ5VT03 806 aaPredicted RBP16■□□□□ 0.15
CLTC-202ENST00000393043 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
CLTC-202ENST00000393043 MIA2Q96PC5 1412 aa15.99■□□□□ 0.15
CLTC-202ENST00000393043 IFT140Q96RY7 1462 aa15.99■□□□□ 0.15
CLTC-202ENST00000393043 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
CLTC-202ENST00000393043 CGNL1Q0VF96 1302 aa15.99■□□□□ 0.15
CLTC-202ENST00000393043 CCDC7Q96M83 1385 aa15.98■□□□□ 0.15
CLTC-202ENST00000393043 POLA1P09884 1462 aaPredicted RBP15.98■□□□□ 0.15
CLTC-202ENST00000393043 EHBP1L1Q8N3D4 1523 aa15.98■□□□□ 0.15
CLTC-202ENST00000393043 TSHZ2Q9NRE2 1034 aa15.98■□□□□ 0.15
CLTC-202ENST00000393043 NGEFQ8N5V2 710 aa15.98■□□□□ 0.15
CLTC-202ENST00000393043 FGD1P98174 961 aa15.98■□□□□ 0.15
CLTC-202ENST00000393043 CC2D2AQ9P2K1 1620 aa15.97■□□□□ 0.15
CLTC-202ENST00000393043 STK31Q9BXU1 1019 aa15.97■□□□□ 0.15
CLTC-202ENST00000393043 NESP48681 1621 aa15.97■□□□□ 0.15
CLTC-202ENST00000393043 SYNJ2O15056 1496 aa15.96■□□□□ 0.15
CLTC-202ENST00000393043 DNMBPQ6XZF7 1577 aa15.95■□□□□ 0.14
CLTC-202ENST00000393043 NGDNQ8NEJ9 315 aaKnown RBP15.95■□□□□ 0.14
CLTC-202ENST00000393043 E9PSI1 815 aa15.95■□□□□ 0.14
CLTC-202ENST00000393043 KIF7Q2M1P5 1343 aa15.94■□□□□ 0.14
CLTC-202ENST00000393043 CNTLNQ9NXG0 1405 aa15.94■□□□□ 0.14
CLTC-202ENST00000393043 HDAC5Q9UQL6 1122 aa15.94■□□□□ 0.14
CLTC-202ENST00000393043 TIAM1Q13009 1591 aa15.94■□□□□ 0.14
CLTC-202ENST00000393043 HMMRO75330 724 aa15.93■□□□□ 0.14
CLTC-202ENST00000393043 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.92■□□□□ 0.142e-6■■■□□ 15.8
CLTC-202ENST00000393043 L1TD1Q5T7N2 865 aaKnown RBP15.91■□□□□ 0.14
CLTC-202ENST00000393043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.91■□□□□ 0.149e-6■□□□□ 9.6
CLTC-202ENST00000393043 RRP1P56182 461 aaKnown RBP15.91■□□□□ 0.14
CLTC-202ENST00000393043 AMPHP49418 695 aa15.9■□□□□ 0.14
CLTC-202ENST00000393043 PTMSP20962 102 aa15.9■□□□□ 0.14
CLTC-202ENST00000393043 HFM1A2PYH4 1435 aa15.9■□□□□ 0.14
CLTC-202ENST00000393043 KIAA1211Q6ZU35 1233 aa15.9■□□□□ 0.14
CLTC-202ENST00000393043 CLUAP1Q96AJ1 413 aa15.9■□□□□ 0.14
CLTC-202ENST00000393043 HECW1Q76N89 1606 aa15.9■□□□□ 0.14
CLTC-202ENST00000393043 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
CLTC-202ENST00000393043 CDK11BP21127 795 aaKnown RBP15.9■□□□□ 0.14
CLTC-202ENST00000393043 CENPQQ7L2Z9 268 aaPredicted RBP15.9■□□□□ 0.14
CLTC-202ENST00000393043 IPO9Q96P70 1041 aaKnown RBP15.9■□□□□ 0.14
CLTC-202ENST00000393043 ARHGAP5Q13017 1502 aa15.89■□□□□ 0.13
CLTC-202ENST00000393043 APBB1O00213 710 aa15.89■□□□□ 0.13
CLTC-202ENST00000393043 NPHP1O15259 732 aa15.89■□□□□ 0.13
CLTC-202ENST00000393043 PRG4Q92954 1404 aaPredicted RBP15.89■□□□□ 0.13
CLTC-202ENST00000393043 TROQ12816 1431 aaPredicted RBP15.88■□□□□ 0.13
CLTC-202ENST00000393043 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
CLTC-202ENST00000393043 COG3Q96JB2 828 aa15.88■□□□□ 0.13
CLTC-202ENST00000393043 GBP4Q96PP9 640 aa15.87■□□□□ 0.13
CLTC-202ENST00000393043 BICRAQ9NZM4 1560 aa15.87■□□□□ 0.13
CLTC-202ENST00000393043 GOLGA6L4A6NEF3 574 aa15.87■□□□□ 0.13
CLTC-202ENST00000393043 TPRNQ4KMQ1 711 aa15.87■□□□□ 0.13
CLTC-202ENST00000393043 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
CLTC-202ENST00000393043 PLEKHH2Q8IVE3 1493 aa15.87■□□□□ 0.13
CLTC-202ENST00000393043 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
CLTC-202ENST00000393043 DNTTIP2Q5QJE6 756 aaKnown RBP15.85■□□□□ 0.13
CLTC-202ENST00000393043 WASHC2AQ641Q2 1341 aa15.85■□□□□ 0.13
CLTC-202ENST00000393043 MINK1Q8N4C8 1332 aaPredicted RBP15.85■□□□□ 0.13
CLTC-202ENST00000393043 SPRYD3Q8NCJ5 442 aa15.85■□□□□ 0.13
CLTC-202ENST00000393043 APAF1O14727 1248 aa15.84■□□□□ 0.13
CLTC-202ENST00000393043 ZKSCAN2Q63HK3 967 aa15.84■□□□□ 0.13
CLTC-202ENST00000393043 NAP1L2Q9ULW6 460 aaPredicted RBP15.84■□□□□ 0.13
CLTC-202ENST00000393043 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
CLTC-202ENST00000393043 KIAA1107Q9UPP5 1409 aa15.84■□□□□ 0.13
CLTC-202ENST00000393043 C9orf84Q5VXU9 1444 aa15.83■□□□□ 0.13
CLTC-202ENST00000393043 DEKP35659 375 aaKnown RBP15.83■□□□□ 0.13
CLTC-202ENST00000393043 BRD4O60885 1362 aaPredicted RBP15.83■□□□□ 0.13
CLTC-202ENST00000393043 GOLGA6L6A8MZA4 724 aa15.83■□□□□ 0.12
CLTC-202ENST00000393043 SNAPC4Q5SXM2 1469 aa15.83■□□□□ 0.12
CLTC-202ENST00000393043 MFAP1P55081 439 aaKnown RBP15.82■□□□□ 0.12
CLTC-202ENST00000393043 SUPT6HQ7KZ85 1726 aaKnown RBP15.82■□□□□ 0.12
CLTC-202ENST00000393043 EXOC6Q8TAG9 804 aa15.82■□□□□ 0.12
CLTC-202ENST00000393043 GPATCH3Q96I76 525 aa15.82■□□□□ 0.12
CLTC-202ENST00000393043 DIAPH1O60610 1272 aaKnown RBP15.81■□□□□ 0.12
CLTC-202ENST00000393043 PLCB2Q00722 1185 aa15.81■□□□□ 0.12
CLTC-202ENST00000393043 KIAA0586Q9BVV6 1533 aa15.81■□□□□ 0.12
CLTC-202ENST00000393043 PEG3Q9GZU2 1588 aa15.81■□□□□ 0.12
CLTC-202ENST00000393043 SLC4A10Q6U841 1118 aa15.81■□□□□ 0.12
CLTC-202ENST00000393043 NUTM2FA1L443 756 aa15.8■□□□□ 0.12
CLTC-202ENST00000393043 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
CLTC-202ENST00000393043 NRDCO43847 1150 aa15.8■□□□□ 0.12
CLTC-202ENST00000393043 CRBNQ96SW2 442 aa15.8■□□□□ 0.12
CLTC-202ENST00000393043 SLKQ9H2G2 1235 aaPredicted RBP15.8■□□□□ 0.12
CLTC-202ENST00000393043 AFAP1Q8N556 730 aa15.8■□□□□ 0.12
CLTC-202ENST00000393043 FAM161AQ3B820 660 aa15.79■□□□□ 0.12
CLTC-202ENST00000393043 RUNDC1Q96C34 613 aa15.79■□□□□ 0.12
CLTC-202ENST00000393043 PLIN1O60240 522 aa15.79■□□□□ 0.12
CLTC-202ENST00000393043 DAPK1P53355 1430 aa15.79■□□□□ 0.12
CLTC-202ENST00000393043 FAM69CQ0P6D2 419 aa15.78■□□□□ 0.12
CLTC-202ENST00000393043 MAP3K1Q13233 1512 aa15.78■□□□□ 0.12
CLTC-202ENST00000393043 CUL7Q14999 1698 aa15.78■□□□□ 0.12
CLTC-202ENST00000393043 PDE4AP27815 886 aa15.78■□□□□ 0.12
CLTC-202ENST00000393043 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.11
CLTC-202ENST00000393043 EPRSP07814 1512 aaKnown RBP15.77■□□□□ 0.11
CLTC-202ENST00000393043 ROCK1Q13464 1354 aa15.76■□□□□ 0.11
CLTC-202ENST00000393043 TRIM6-TRIM34B2RNG4 842 aa15.76■□□□□ 0.11
CLTC-202ENST00000393043 BCL2L13Q9BXK5 485 aa15.76■□□□□ 0.11
CLTC-202ENST00000393043 DDX19BQ9UMR2 479 aa15.75■□□□□ 0.11
CLTC-202ENST00000393043 NAP1L5Q96NT1 182 aaPredicted RBP15.75■□□□□ 0.11
CLTC-202ENST00000393043 COG6Q9Y2V7 657 aa15.75■□□□□ 0.11
CLTC-202ENST00000393043 AAMPQ13685 434 aa15.74■□□□□ 0.11
CLTC-202ENST00000393043 IQGAP2Q13576 1575 aa15.74■□□□□ 0.11
CLTC-202ENST00000393043 HTATSF1O43719 755 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms