RNA–Protein interactions for RNA: ENST00000392871.6

GTDC1-205, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 2

Gene GTDC1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-205ENST00000392871 CHMP7Q8WUX9 453 aaPredicted RBP6.62□□□□□ -1.35
GTDC1-205ENST00000392871 PHLDB1Q86UU1 1377 aa6.62□□□□□ -1.35
GTDC1-205ENST00000392871 ZNF316A6NFI3 1004 aaPredicted RBP6.61□□□□□ -1.35
GTDC1-205ENST00000392871 SMYD5Q6GMV2 418 aa6.61□□□□□ -1.35
GTDC1-205ENST00000392871 FARP1Q9Y4F1 1045 aaPredicted RBP6.61□□□□□ -1.35
GTDC1-205ENST00000392871 SYNJ2O15056 1496 aa6.61□□□□□ -1.35
GTDC1-205ENST00000392871 GRIN2AQ12879 1464 aa6.61□□□□□ -1.35
GTDC1-205ENST00000392871 LRRC9Q6ZRR7 1453 aa6.61□□□□□ -1.35
GTDC1-205ENST00000392871 ATP1B4Q9UN42 357 aaPredicted RBP6.61□□□□□ -1.35
GTDC1-205ENST00000392871 SOX12O15370 315 aa6.6□□□□□ -1.35
GTDC1-205ENST00000392871 NEUROD1Q13562 356 aa6.6□□□□□ -1.35
GTDC1-205ENST00000392871 ARIH1Q9Y4X5 557 aaPredicted RBP6.6□□□□□ -1.35
GTDC1-205ENST00000392871 MAP3K13O43283 966 aa6.6□□□□□ -1.35
GTDC1-205ENST00000392871 CAMK2BQ13554 666 aa6.6□□□□□ -1.35
GTDC1-205ENST00000392871 GPIHBP1Q8IV16 184 aa6.6□□□□□ -1.35
GTDC1-205ENST00000392871 DDX27Q96GQ7 796 aaKnown RBP6.6□□□□□ -1.35
GTDC1-205ENST00000392871 TRIM66O15016 1216 aa6.59□□□□□ -1.35
GTDC1-205ENST00000392871 PDE4AP27815 886 aa6.59□□□□□ -1.35
GTDC1-205ENST00000392871 KRI1Q8N9T8 703 aaKnown RBP6.59□□□□□ -1.35
GTDC1-205ENST00000392871 FAM117AQ9C073 453 aa6.59□□□□□ -1.35
GTDC1-205ENST00000392871 PDE4DQ08499 809 aa6.59□□□□□ -1.35
GTDC1-205ENST00000392871 LRRIQ1Q96JM4 1722 aa6.58□□□□□ -1.36
GTDC1-205ENST00000392871 MAP3K1Q13233 1512 aa6.58□□□□□ -1.36
GTDC1-205ENST00000392871 RAB3GAP2Q9H2M9 1393 aa6.58□□□□□ -1.36
GTDC1-205ENST00000392871 FYCO1Q9BQS8 1478 aa6.58□□□□□ -1.36
GTDC1-205ENST00000392871 EFCAB5A4FU69 1503 aa6.58□□□□□ -1.36
GTDC1-205ENST00000392871 MAPKBP1O60336 1514 aa6.57□□□□□ -1.36
GTDC1-205ENST00000392871 NUP160Q12769 1436 aa6.57□□□□□ -1.36
GTDC1-205ENST00000392871 NPM2Q86SE8 214 aaKnown RBP6.57□□□□□ -1.36
GTDC1-205ENST00000392871 KIAA0586Q9BVV6 1533 aa6.57□□□□□ -1.36
GTDC1-205ENST00000392871 FAM50AQ14320 339 aaKnown RBP6.57□□□□□ -1.36
GTDC1-205ENST00000392871 YTHDC1Q96MU7 727 aaKnown RBP6.57□□□□□ -1.36
GTDC1-205ENST00000392871 CEP170Q5SW79 1584 aa6.56□□□□□ -1.36
GTDC1-205ENST00000392871 IQGAP2Q13576 1575 aa6.56□□□□□ -1.36
GTDC1-205ENST00000392871 SAMD9Q5K651 1589 aa6.56□□□□□ -1.36
GTDC1-205ENST00000392871 CASKIN1Q8WXD9 1431 aa6.56□□□□□ -1.36
GTDC1-205ENST00000392871 ACIN1Q9UKV3 1341 aaKnown RBP6.56□□□□□ -1.36
GTDC1-205ENST00000392871 KIF12Q96FN5 646 aa6.55□□□□□ -1.36
GTDC1-205ENST00000392871 PLEKHG3A1L390 1219 aa6.55□□□□□ -1.36
GTDC1-205ENST00000392871 APBB1O00213 710 aa6.55□□□□□ -1.36
GTDC1-205ENST00000392871 UGGT2Q9NYU1 1516 aa6.54□□□□□ -1.36
GTDC1-205ENST00000392871 JPH4Q96JJ6 628 aa6.54□□□□□ -1.36
GTDC1-205ENST00000392871 GPR37O15354 613 aa6.53□□□□□ -1.36
GTDC1-205ENST00000392871 DISP1Q96F81 1524 aa6.53□□□□□ -1.36
GTDC1-205ENST00000392871 DPYSL4O14531 572 aa6.52□□□□□ -1.37
GTDC1-205ENST00000392871 NECTIN2Q92692 538 aa6.52□□□□□ -1.37
GTDC1-205ENST00000392871 EMILIN3Q9NT22 766 aa6.52□□□□□ -1.37
GTDC1-205ENST00000392871 MAGI3Q5TCQ9 1506 aa6.52□□□□□ -1.37
GTDC1-205ENST00000392871 FMN1Q68DA7 1419 aa6.52□□□□□ -1.37
GTDC1-205ENST00000392871 SETD5Q9C0A6 1442 aa6.52□□□□□ -1.37
GTDC1-205ENST00000392871 CLSPNQ9HAW4 1339 aa6.51□□□□□ -1.37
GTDC1-205ENST00000392871 FGD6Q6ZV73 1430 aa6.51□□□□□ -1.37
GTDC1-205ENST00000392871 PRKAR2AP13861 404 aaKnown RBP6.51□□□□□ -1.37
GTDC1-205ENST00000392871 PTPRKQ15262 1439 aa6.5□□□□□ -1.37
GTDC1-205ENST00000392871 CHD1O14646 1710 aa6.5□□□□□ -1.37
GTDC1-205ENST00000392871 MTUS2Q5JR59 1369 aa6.5□□□□□ -1.37
GTDC1-205ENST00000392871 NCOA2Q15596 1464 aa6.5□□□□□ -1.37
GTDC1-205ENST00000392871 PPP1R15BQ5SWA1 713 aa6.5□□□□□ -1.37
GTDC1-205ENST00000392871 SIN3AQ96ST3 1273 aa6.5□□□□□ -1.37
GTDC1-205ENST00000392871 KIAA0556O60303 1618 aa6.5□□□□□ -1.37
GTDC1-205ENST00000392871 CENPBP07199 599 aaPredicted RBP6.49□□□□□ -1.37
GTDC1-205ENST00000392871 CLUAP1Q96AJ1 413 aa6.49□□□□□ -1.37
GTDC1-205ENST00000392871 CDK13Q14004 1512 aaKnown RBP6.49□□□□□ -1.37
GTDC1-205ENST00000392871 ONECUT3O60422 494 aaPredicted RBP6.49□□□□□ -1.37
GTDC1-205ENST00000392871 TRPC6Q9Y210 931 aa6.49□□□□□ -1.37
GTDC1-205ENST00000392871 CARMIL2Q6F5E8 1435 aa6.48□□□□□ -1.37
GTDC1-205ENST00000392871 PRG4Q92954 1404 aaPredicted RBP6.48□□□□□ -1.37
GTDC1-205ENST00000392871 EHBP1L1Q8N3D4 1523 aa6.48□□□□□ -1.37
GTDC1-205ENST00000392871 SUPT6HQ7KZ85 1726 aaKnown RBP6.48□□□□□ -1.37
GTDC1-205ENST00000392871 CCDC82Q8N4S0 544 aa6.47□□□□□ -1.37
GTDC1-205ENST00000392871 PARP9Q8IXQ6 854 aa6.47□□□□□ -1.37
GTDC1-205ENST00000392871 CLASP1Q7Z460 1538 aa6.47□□□□□ -1.37
GTDC1-205ENST00000392871 PTPN23Q9H3S7 1636 aa6.47□□□□□ -1.37
GTDC1-205ENST00000392871 MYOM3Q5VTT5 1437 aa6.47□□□□□ -1.37
GTDC1-205ENST00000392871 CCDC18Q5T9S5 1454 aa6.46□□□□□ -1.37
GTDC1-205ENST00000392871 PDIA6Q15084 440 aa6.46□□□□□ -1.37
GTDC1-205ENST00000392871 GPHNQ9NQX3 736 aaPredicted RBP6.46□□□□□ -1.37
GTDC1-205ENST00000392871 HECW1Q76N89 1606 aa6.46□□□□□ -1.38
GTDC1-205ENST00000392871 DSG2Q14126 1118 aa6.46□□□□□ -1.38
GTDC1-205ENST00000392871 CCDC102AQ96A19 550 aa6.46□□□□□ -1.38
GTDC1-205ENST00000392871 ARHGEF11O15085 1522 aa6.45□□□□□ -1.38
GTDC1-205ENST00000392871 FECHP22830 423 aa6.45□□□□□ -1.38
GTDC1-205ENST00000392871 PLB1Q6P1J6 1458 aa6.45□□□□□ -1.38
GTDC1-205ENST00000392871 EPRSP07814 1512 aaKnown RBP6.45□□□□□ -1.38
GTDC1-205ENST00000392871 KDM6BO15054 1643 aa6.45□□□□□ -1.38
GTDC1-205ENST00000392871 SHROOM2Q13796 1616 aa6.45□□□□□ -1.38
GTDC1-205ENST00000392871 PHF12Q96QT6 1004 aa6.45□□□□□ -1.38
GTDC1-205ENST00000392871 ERCC6L2Q5T890 1561 aa6.44□□□□□ -1.38
GTDC1-205ENST00000392871 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.44□□□□□ -1.38
GTDC1-205ENST00000392871 HFM1A2PYH4 1435 aa6.44□□□□□ -1.38
GTDC1-205ENST00000392871 PTPRGP23470 1445 aa6.44□□□□□ -1.38
GTDC1-205ENST00000392871 TMEM106CQ9BVX2 250 aa6.44□□□□□ -1.38
GTDC1-205ENST00000392871 HIRIP3Q9BW71 556 aaPredicted RBP6.44□□□□□ -1.38
GTDC1-205ENST00000392871 NAIPQ13075 1403 aa6.44□□□□□ -1.38
GTDC1-205ENST00000392871 NUP153P49790 1475 aaKnown RBP6.44□□□□□ -1.38
GTDC1-205ENST00000392871 PAK3O75914 559 aaPredicted RBP6.43□□□□□ -1.38
GTDC1-205ENST00000392871 CHIC2Q9UKJ5 165 aa6.43□□□□□ -1.38
GTDC1-205ENST00000392871 MINK1Q8N4C8 1332 aaPredicted RBP6.42□□□□□ -1.38
GTDC1-205ENST00000392871 GRXCR2A6NFK2 248 aa6.42□□□□□ -1.38
GTDC1-205ENST00000392871 IRF6O14896 467 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms