RNA–Protein interactions for RNA: ENST00000392784.6

USP30-203, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2 BASIC

Gene USP30, Length 2,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-203ENST00000392784 CD109Q6YHK3 1445 aa13.09□□□□□ -0.31
USP30-203ENST00000392784 E9PCH4 1651 aa13.09□□□□□ -0.31
USP30-203ENST00000392784 MYT1LQ9UL68 1186 aa13.08□□□□□ -0.31
USP30-203ENST00000392784 CCDC144AA2RUR9 1427 aa13.08□□□□□ -0.32
USP30-203ENST00000392784 RIMBP3CA6NJZ7 1639 aa13.08□□□□□ -0.32
USP30-203ENST00000392784 RIMBP3BA6NNM3 1639 aa13.08□□□□□ -0.32
USP30-203ENST00000392784 DEPDC5O75140 1603 aa13.08□□□□□ -0.32
USP30-203ENST00000392784 RIMBP3Q9UFD9 1639 aa13.08□□□□□ -0.32
USP30-203ENST00000392784 CYB5RLQ6IPT4 315 aa13.08□□□□□ -0.32
USP30-203ENST00000392784 BCORL1Q5H9F3 1711 aa13.08□□□□□ -0.32
USP30-203ENST00000392784 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
USP30-203ENST00000392784 UHRF1BP1Q6BDS2 1440 aa13.07□□□□□ -0.32
USP30-203ENST00000392784 KDM5CP41229 1560 aa13.07□□□□□ -0.32
USP30-203ENST00000392784 RGL3Q3MIN7 710 aa13.06□□□□□ -0.32
USP30-203ENST00000392784 POLR1AO95602 1720 aaPredicted RBP13.06□□□□□ -0.32
USP30-203ENST00000392784 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
USP30-203ENST00000392784 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
USP30-203ENST00000392784 CCDC7Q96M83 1385 aa13.05□□□□□ -0.32
USP30-203ENST00000392784 GTF3C3Q9Y5Q9 886 aa13.05□□□□□ -0.32
USP30-203ENST00000392784 USP47Q96K76 1375 aa13.05□□□□□ -0.32
USP30-203ENST00000392784 A2MP01023 1474 aa13.04□□□□□ -0.32
USP30-203ENST00000392784 KIF3BO15066 747 aa13.04□□□□□ -0.32
USP30-203ENST00000392784 ZNF518AQ6AHZ1 1483 aa13.03□□□□□ -0.32
USP30-203ENST00000392784 CFAP74Q9C0B2 1584 aa13.03□□□□□ -0.32
USP30-203ENST00000392784 ANP32CO43423 234 aa13.03□□□□□ -0.32
USP30-203ENST00000392784 KIF7Q2M1P5 1343 aa13.03□□□□□ -0.32
USP30-203ENST00000392784 POGZQ7Z3K3 1410 aa13.03□□□□□ -0.32
USP30-203ENST00000392784 VWDEQ8N2E2 1590 aa13.02□□□□□ -0.32
USP30-203ENST00000392784 SPHKAPQ2M3C7 1700 aa13.02□□□□□ -0.32
USP30-203ENST00000392784 ATP10AO60312 1499 aa13.02□□□□□ -0.33
USP30-203ENST00000392784 TRPM1Q7Z4N2 1603 aa13.02□□□□□ -0.33
USP30-203ENST00000392784 TET3O43151 1660 aa13.02□□□□□ -0.33
USP30-203ENST00000392784 DHX29Q7Z478 1369 aaKnown RBP13.02□□□□□ -0.33
USP30-203ENST00000392784 EIF2AK4Q9P2K8 1649 aaKnown RBP13.02□□□□□ -0.33
USP30-203ENST00000392784 PRAG1Q86YV5 1406 aa13.01□□□□□ -0.33
USP30-203ENST00000392784 CNTLNQ9NXG0 1405 aa13.01□□□□□ -0.33
USP30-203ENST00000392784 CLTCL1P53675 1640 aa13□□□□□ -0.33
USP30-203ENST00000392784 FRMPD1Q5SYB0 1578 aa13□□□□□ -0.33
USP30-203ENST00000392784 PRDM15P57071 1507 aaPredicted RBP13□□□□□ -0.33
USP30-203ENST00000392784 CEP152O94986 1710 aa13□□□□□ -0.33
USP30-203ENST00000392784 ABCA6Q8N139 1617 aa13□□□□□ -0.33
USP30-203ENST00000392784 RAPGEF3O95398 923 aa13□□□□□ -0.33
USP30-203ENST00000392784 CARD11Q9BXL7 1154 aa13□□□□□ -0.33
USP30-203ENST00000392784 MAP3K4Q9Y6R4 1608 aa12.99□□□□□ -0.33
USP30-203ENST00000392784 HECW2Q9P2P5 1572 aa12.99□□□□□ -0.33
USP30-203ENST00000392784 CFAP65Q6ZU64 1925 aaKnown RBP12.99□□□□□ -0.33
USP30-203ENST00000392784 NBPF1Q3BBV0 1214 aa12.98□□□□□ -0.33
USP30-203ENST00000392784 TRPM2O94759 1503 aa12.98□□□□□ -0.33
USP30-203ENST00000392784 UGGT1Q9NYU2 1555 aa12.98□□□□□ -0.33
USP30-203ENST00000392784 PPRC1Q5VV67 1664 aaKnown RBP12.97□□□□□ -0.33
USP30-203ENST00000392784 ROCK2O75116 1388 aaKnown RBP12.97□□□□□ -0.33
USP30-203ENST00000392784 POLR3GLQ9BT43 218 aa12.97□□□□□ -0.33
USP30-203ENST00000392784 RICTORQ6R327 1708 aa12.97□□□□□ -0.33
USP30-203ENST00000392784 PTPRTO14522 1441 aa12.96□□□□□ -0.33
USP30-203ENST00000392784 TSPOAP1O95153 1857 aa12.96□□□□□ -0.33
USP30-203ENST00000392784 MLH3Q9UHC1 1453 aa12.96□□□□□ -0.34
USP30-203ENST00000392784 CCER2I3L3R5 266 aa12.96□□□□□ -0.34
USP30-203ENST00000392784 KANK1Q14678 1352 aa12.95□□□□□ -0.34
USP30-203ENST00000392784 RNF17Q9BXT8 1623 aaKnown RBP12.95□□□□□ -0.34
USP30-203ENST00000392784 NEO1Q92859 1461 aa12.95□□□□□ -0.34
USP30-203ENST00000392784 ST20-MTHFSA0A0A6YYL1 179 aa12.95□□□□□ -0.34
USP30-203ENST00000392784 EFCAB6Q5THR3 1501 aa12.94□□□□□ -0.34
USP30-203ENST00000392784 CCDC184Q52MB2 194 aa12.94□□□□□ -0.34
USP30-203ENST00000392784 DIP2BQ9P265 1576 aa12.93□□□□□ -0.34
USP30-203ENST00000392784 DIP2CQ9Y2E4 1556 aa12.92□□□□□ -0.34
USP30-203ENST00000392784 MADDQ8WXG6 1647 aa12.92□□□□□ -0.34
USP30-203ENST00000392784 GLI2P10070 1586 aa12.92□□□□□ -0.34
USP30-203ENST00000392784 CNGB1Q14028 1251 aaPredicted RBP12.91□□□□□ -0.34
USP30-203ENST00000392784 GGT6Q6P531 493 aa12.91□□□□□ -0.34
USP30-203ENST00000392784 MROH2AA6NES4 1674 aa12.91□□□□□ -0.34
USP30-203ENST00000392784 YEATS2Q9ULM3 1422 aa12.91□□□□□ -0.34
USP30-203ENST00000392784 FAM69CQ0P6D2 419 aa12.91□□□□□ -0.34
USP30-203ENST00000392784 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
USP30-203ENST00000392784 PRKRIP1Q9H875 184 aaPredicted RBP12.89□□□□□ -0.35
USP30-203ENST00000392784 LMTK2Q8IWU2 1503 aa12.89□□□□□ -0.35
USP30-203ENST00000392784 LAMC1P11047 1609 aa12.89□□□□□ -0.35
USP30-203ENST00000392784 KIF1BO60333 1816 aa12.89□□□□□ -0.35
USP30-203ENST00000392784 SIGLEC1Q9BZZ2 1709 aa12.88□□□□□ -0.35
USP30-203ENST00000392784 NPATQ14207 1427 aa12.87□□□□□ -0.35
USP30-203ENST00000392784 ABCC3O15438 1527 aa12.87□□□□□ -0.35
USP30-203ENST00000392784 CAMSAP1Q5T5Y3 1602 aa12.86□□□□□ -0.35
USP30-203ENST00000392784 IFT172Q9UG01 1749 aa12.85□□□□□ -0.35
USP30-203ENST00000392784 IQGAP1P46940 1657 aa12.85□□□□□ -0.35
USP30-203ENST00000392784 DISP3Q9P2K9 1392 aa12.85□□□□□ -0.35
USP30-203ENST00000392784 KIF13AQ9H1H9 1805 aa12.84□□□□□ -0.35
USP30-203ENST00000392784 TESK2Q96S53 571 aa12.84□□□□□ -0.35
USP30-203ENST00000392784 ARID4BQ4LE39 1312 aaPredicted RBP12.83□□□□□ -0.35
USP30-203ENST00000392784 WASHC2CQ9Y4E1 1318 aa12.83□□□□□ -0.35
USP30-203ENST00000392784 ADGRF5Q8IZF2 1346 aa12.82□□□□□ -0.36
USP30-203ENST00000392784 COL17A1Q9UMD9 1497 aaPredicted RBP12.82□□□□□ -0.36
USP30-203ENST00000392784 ADGRB3O60242 1522 aa12.81□□□□□ -0.36
USP30-203ENST00000392784 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
USP30-203ENST00000392784 ZMYM4Q5VZL5 1548 aa12.81□□□□□ -0.36
USP30-203ENST00000392784 SYNMO15061 1565 aa12.81□□□□□ -0.36
USP30-203ENST00000392784 CHGAP10645 457 aaKnown RBP12.81□□□□□ -0.36
USP30-203ENST00000392784 MRS2Q9HD23 443 aa12.8□□□□□ -0.36
USP30-203ENST00000392784 PPLO60437 1756 aa12.79□□□□□ -0.36
USP30-203ENST00000392784 CFAP70Q5T0N1 1121 aa12.79□□□□□ -0.36
USP30-203ENST00000392784 NOS1P29475 1434 aa12.79□□□□□ -0.36
USP30-203ENST00000392784 HNRNPUQ00839 825 aaKnown RBP eCLIP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms