RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 ZCCHC11Q5TAX3 1644 aaKnown RBP14.71□□□□□ -0.05
BRF1-204ENST00000392557 SPAG9O60271 1321 aaKnown RBP14.71□□□□□ -0.05
BRF1-204ENST00000392557 PLEKHH2Q8IVE3 1493 aa14.71□□□□□ -0.06
BRF1-204ENST00000392557 CCDC7Q96M83 1385 aa14.7□□□□□ -0.06
BRF1-204ENST00000392557 KIF7Q2M1P5 1343 aa14.7□□□□□ -0.06
BRF1-204ENST00000392557 SENP3Q9H4L4 574 aaPredicted RBP14.69□□□□□ -0.06
BRF1-204ENST00000392557 ARHGEF5Q12774 1597 aa14.69□□□□□ -0.06
BRF1-204ENST00000392557 USP47Q96K76 1375 aa14.69□□□□□ -0.06
BRF1-204ENST00000392557 PLCH2O75038 1416 aa14.69□□□□□ -0.06
BRF1-204ENST00000392557 PRKRIP1Q9H875 184 aaPredicted RBP14.69□□□□□ -0.06
BRF1-204ENST00000392557 MYO5CQ9NQX4 1742 aa14.68□□□□□ -0.06
BRF1-204ENST00000392557 ARHGEF12Q9NZN5 1544 aa14.68□□□□□ -0.06
BRF1-204ENST00000392557 TRAPPC8Q9Y2L5 1435 aa14.68□□□□□ -0.06
BRF1-204ENST00000392557 CCDC144AA2RUR9 1427 aa14.67□□□□□ -0.06
BRF1-204ENST00000392557 CCDC136Q96JN2 1154 aa14.67□□□□□ -0.06
BRF1-204ENST00000392557 FAM135AQ9P2D6 1515 aa14.66□□□□□ -0.06
BRF1-204ENST00000392557 ST20-MTHFSA0A0A6YYL1 179 aa14.64□□□□□ -0.07
BRF1-204ENST00000392557 FANCIQ9NVI1 1328 aa14.64□□□□□ -0.07
BRF1-204ENST00000392557 CNTLNQ9NXG0 1405 aa14.64□□□□□ -0.07
BRF1-204ENST00000392557 ROCK2O75116 1388 aaKnown RBP14.63□□□□□ -0.07
BRF1-204ENST00000392557 KIF3BO15066 747 aa14.63□□□□□ -0.07
BRF1-204ENST00000392557 UHRF1BP1LA0JNW5 1464 aa14.62□□□□□ -0.07
BRF1-204ENST00000392557 NPM2Q86SE8 214 aaKnown RBP14.62□□□□□ -0.07
BRF1-204ENST00000392557 NBPF1Q3BBV0 1214 aa14.61□□□□□ -0.07
BRF1-204ENST00000392557 WDR7Q9Y4E6 1490 aa14.61□□□□□ -0.07
BRF1-204ENST00000392557 TMC1Q8TDI8 760 aa14.6□□□□□ -0.07
BRF1-204ENST00000392557 SCAPERQ9BY12 1400 aa14.6□□□□□ -0.07
BRF1-204ENST00000392557 ASXL2Q76L83 1435 aa14.6□□□□□ -0.07
BRF1-204ENST00000392557 FANCAO15360 1455 aa14.59□□□□□ -0.07
BRF1-204ENST00000392557 ANP32AP39687 249 aaKnown RBP14.59□□□□□ -0.07
BRF1-204ENST00000392557 SPATA31E1Q6ZUB1 1445 aa14.59□□□□□ -0.07
BRF1-204ENST00000392557 RTL5Q5HYW3 569 aaPredicted RBP14.58□□□□□ -0.08
BRF1-204ENST00000392557 ERICH6BQ5W0A0 696 aa14.58□□□□□ -0.08
BRF1-204ENST00000392557 ZBED9Q6R2W3 1325 aa14.58□□□□□ -0.08
BRF1-204ENST00000392557 DUOX2Q9NRD8 1548 aa14.57□□□□□ -0.08
BRF1-204ENST00000392557 DEKP35659 375 aaKnown RBP14.57□□□□□ -0.08
BRF1-204ENST00000392557 NOP58Q9Y2X3 529 aaKnown RBP14.57□□□□□ -0.08
BRF1-204ENST00000392557 ABCC1P33527 1531 aa14.56□□□□□ -0.08
BRF1-204ENST00000392557 KDM5DQ9BY66 1539 aa14.56□□□□□ -0.08
BRF1-204ENST00000392557 ADGRL1O94910 1474 aa14.55□□□□□ -0.08
BRF1-204ENST00000392557 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
BRF1-204ENST00000392557 CYB5RLQ6IPT4 315 aa14.55□□□□□ -0.08
BRF1-204ENST00000392557 GGT6Q6P531 493 aa14.54□□□□□ -0.08
BRF1-204ENST00000392557 PLA2R1Q13018 1463 aa14.54□□□□□ -0.08
BRF1-204ENST00000392557 ERBINQ96RT1 1412 aa14.53□□□□□ -0.08
BRF1-204ENST00000392557 MAST1Q9Y2H9 1570 aa14.53□□□□□ -0.08
BRF1-204ENST00000392557 ZBTB47Q9UFB7 747 aaPredicted RBP14.52□□□□□ -0.08
BRF1-204ENST00000392557 RALGAPBQ86X10 1494 aa14.52□□□□□ -0.08
BRF1-204ENST00000392557 KANK1Q14678 1352 aa14.51□□□□□ -0.09
BRF1-204ENST00000392557 PLXNC1O60486 1568 aa14.51□□□□□ -0.09
BRF1-204ENST00000392557 PAK3O75914 559 aaPredicted RBP14.5□□□□□ -0.09
BRF1-204ENST00000392557 UHRF1BP1Q6BDS2 1440 aa14.5□□□□□ -0.09
BRF1-204ENST00000392557 BCORL1Q5H9F3 1711 aa14.5□□□□□ -0.09
BRF1-204ENST00000392557 NUDCQ9Y266 331 aa14.49□□□□□ -0.09
BRF1-204ENST00000392557 UNC13BO14795 1591 aa14.49□□□□□ -0.09
BRF1-204ENST00000392557 RAPGEF3O95398 923 aa14.49□□□□□ -0.09
BRF1-204ENST00000392557 A2MP01023 1474 aa14.49□□□□□ -0.09
BRF1-204ENST00000392557 PRAG1Q86YV5 1406 aa14.48□□□□□ -0.09
BRF1-204ENST00000392557 KDM5CP41229 1560 aa14.48□□□□□ -0.09
BRF1-204ENST00000392557 CD109Q6YHK3 1445 aa14.48□□□□□ -0.09
BRF1-204ENST00000392557 ZFYVE16Q7Z3T8 1539 aa14.47□□□□□ -0.09
BRF1-204ENST00000392557 ATP7AQ04656 1500 aa14.46□□□□□ -0.09
BRF1-204ENST00000392557 IQGAP3Q86VI3 1631 aa14.46□□□□□ -0.09
BRF1-204ENST00000392557 CC2D1BQ5T0F9 858 aaKnown RBP14.45□□□□□ -0.1
BRF1-204ENST00000392557 RTEL1-TNFRSF6BF6WH68 1400 aa14.44□□□□□ -0.1
BRF1-204ENST00000392557 DHX29Q7Z478 1369 aaKnown RBP14.44□□□□□ -0.1
BRF1-204ENST00000392557 ABCA9Q8IUA7 1624 aa14.43□□□□□ -0.1
BRF1-204ENST00000392557 LAS1LQ9Y4W2 734 aaKnown RBP14.42□□□□□ -0.1
BRF1-204ENST00000392557 TMF1P82094 1093 aa14.41□□□□□ -0.1
BRF1-204ENST00000392557 DAXXQ9UER7 740 aaPredicted RBP14.41□□□□□ -0.1
BRF1-204ENST00000392557 ARID4BQ4LE39 1312 aaPredicted RBP14.41□□□□□ -0.1
BRF1-204ENST00000392557 NUTM2DQ5VT03 806 aaPredicted RBP14.41□□□□□ -0.1
BRF1-204ENST00000392557 IPO9Q96P70 1041 aaKnown RBP14.4□□□□□ -0.1
BRF1-204ENST00000392557 WASHC2CQ9Y4E1 1318 aa14.4□□□□□ -0.1
BRF1-204ENST00000392557 CFAP65Q6ZU64 1925 aaKnown RBP14.4□□□□□ -0.1
BRF1-204ENST00000392557 ARAP3Q8WWN8 1544 aa14.4□□□□□ -0.1
BRF1-204ENST00000392557 DISP3Q9P2K9 1392 aa14.4□□□□□ -0.1
BRF1-204ENST00000392557 PANK3Q9H999 370 aa14.39□□□□□ -0.11
BRF1-204ENST00000392557 ATP10AO60312 1499 aa14.39□□□□□ -0.11
BRF1-204ENST00000392557 MAGI2Q86UL8 1455 aa14.39□□□□□ -0.11
BRF1-204ENST00000392557 CFAP70Q5T0N1 1121 aa14.38□□□□□ -0.11
BRF1-204ENST00000392557 E9PCH4 1651 aa14.38□□□□□ -0.11
BRF1-204ENST00000392557 EXOC6Q8TAG9 804 aa14.38□□□□□ -0.11
BRF1-204ENST00000392557 ZNF518AQ6AHZ1 1483 aa14.38□□□□□ -0.11
BRF1-204ENST00000392557 UGGT1Q9NYU2 1555 aa14.37□□□□□ -0.11
BRF1-204ENST00000392557 TESK2Q96S53 571 aa14.37□□□□□ -0.11
BRF1-204ENST00000392557 TRPM1Q7Z4N2 1603 aa14.37□□□□□ -0.11
BRF1-204ENST00000392557 POLR1AO95602 1720 aaPredicted RBP14.36□□□□□ -0.11
BRF1-204ENST00000392557 FAM69CQ0P6D2 419 aa14.36□□□□□ -0.11
BRF1-204ENST00000392557 PNISRQ8TF01 805 aaKnown RBP14.35□□□□□ -0.11
BRF1-204ENST00000392557 INO80Q9ULG1 1556 aaPredicted RBP14.35□□□□□ -0.11
BRF1-204ENST00000392557 ADGRF5Q8IZF2 1346 aa14.35□□□□□ -0.11
BRF1-204ENST00000392557 RCAN3Q9UKA8 241 aa14.35□□□□□ -0.11
BRF1-204ENST00000392557 KTN1Q86UP2 1357 aaKnown RBP14.35□□□□□ -0.11
BRF1-204ENST00000392557 RTN4Q9NQC3 1192 aaKnown RBP14.34□□□□□ -0.11
BRF1-204ENST00000392557 SMG6Q86US8 1419 aaKnown RBP14.34□□□□□ -0.11
BRF1-204ENST00000392557 PLIN1O60240 522 aa14.34□□□□□ -0.11
BRF1-204ENST00000392557 MYBBP1AQ9BQG0 1328 aaKnown RBP14.33□□□□□ -0.11
BRF1-204ENST00000392557 RALBP1Q15311 655 aa14.33□□□□□ -0.12
BRF1-204ENST00000392557 GPRASP1Q5JY77 1395 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms